LOC118945353 (LOC106594169)


Basic Information

Item Value
gene id LOC118945353
gene name LOC106594169
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9654293 ~ 9656911 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968228.1
GAGAGCAGGAAGAACTGTGTCTGTGGGGTTGCTCTTCTCATTGCCTTCAGTTGACCTCAAGGCTTTGTGGAACTGGACTATGGGACACGGTTAGCTACAGTATATGGCCTCTGGCTGAAGCTCTAAGGACTTTGTGGGTGTTTGAGGCTCAGGCCTACTGTGGATGTCTGGGTAAGGAAGTACTGGACTGGGCTTGTGTGTGTCTATCTGAAACACTGCACATGCTGTCTGGGTGTAATCTctaactgcctgtctgtgtccttGTCCTTGCAGGTACTGAGCCCCTGAGTCATTGTCTATGAATACACTGGCTGTCTGTACTGTAGTGAGTGTGTCCAAACCAGCTAACCTCAAGGAGGAAGATGTGGGAGATGcgcacagacacaaacatatgTCCTACAGAACACGAATGAAAAAGGACACTCTTTGATGCTTCTGAGTGTAAAGTAACACACAGGTTACACTACAGAGAGTTCTGGACttactctccctttctctctctctctccctctctctctctctctctctcacacacacacacacacacacacacactcaccctaacACACACCCCCTGAGACATGGATACTATGGTGAAGCAGTCTCTGGCGGTGCCCATGAAGAAGCTGTCCAGCTGTGTGacaggagtgaaggagagagaggtgtgggccAGGCGCAGGGACAAGAGGTGGACAGGAGGAGTAAAGAGCAGCCCTCCACGGACGGGACAGACCTCCGTCACACGCTCCTACCAAACTgacctggagaaagagagGATGCTGAGGGAAGCCCTGAATGCTCAGAAGCACGCAGAGAGAGCCGCCATGAGGGATCACTTCAGGAAGAAGTACCAGCTCTCCAAGAGTTCCAAGGACACCAGCCACCTGAGTGTGGCGCAAGGGAAAGTGGCACTCCCCCGTCAACTGGCTAAACTGATTGGTCCTGAGACCCCGGCCAAGGACGATGGCTACAGCCTGCTGAGCGCCTTCCAAGGCCTCAACTTCAACATGGGGATGCTTGGAGGCAAGCAGACCAAGTCGTCCACTCCAATGTCAGTCAACGGAGAGGCCTGCAAAGTCATGTGATCAAAGAGAACATACTAGATACTAGACAGAATCAACCTGCAACATGCTAAAAACATGCATTATGCCTAAATGATGAAGAATAACATTTTAACACAACGTAGTAGCAGATTGGAGGGAACACAATGGTAGACGACTTTGTCACAGTTGCTCCTCTATCCCTTTATCTCCTTATCtgtctttaactctctctctctctctctctctctctctctctctctttctctctcgctccctgtctctctctctctctctctctctctctctcaccccccatctctctcactctctctcactgagTTATCTGCTGATCAGACTGGTGACAATAGAGCCAGGCTGTGAGGATGACTCGTCAGGGGAAATGACGTCATCCCTATGTCACTGATAGTAGGACATGGCTGTCATTGTTACTATTTGCATAGAACTGGTCTGGACCATACAGGAACTAACTGGATGAAACTGGACTGTACCTGTTTCAGATCATTAGGCCCATTTGGggcccacacacacagggaagtaACCCGAACAAGATAATAACCTTAAGTGTTGTTTTCACATTTACTTCAGTTCTTAGTTCCCAAATATTTGTCTTGTTAATCTTTGTTTTGTACATAACCTTTGACTTTTGTGGTATATATAAGTCAAACGCTGTCCTTATTATGTTGTTACAAAGAAACTGTTAATAAAGACTAGTTTGGTACTGACGTacta

Function

NR:

description
cytochrome P450 11B, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968228.1 True 1793 mRNA 0.48 3 9654293 9656911

Neighbor

gene id symbol gene type direction distance location
cyp11b cyp11b coding downstream 341 9641638 ~ 9653952 (-)
LOC110536519 LOC106573729 coding downstream 13060 9603201 ~ 9641233 (-)
LOC110520821 LOC106574299 coding downstream 59639 9559133 ~ 9594654 (-)
LOC110508584 LOC104949237 coding downstream 102650 9528874 ~ 9551643 (-)
LOC110508594 LOC106605789 coding downstream 128980 9515908 ~ 9525313 (-)
LOC118944443 LOC106573533 coding upstream 8951 9665862 ~ 9673439 (-)
LOC110534283 LOC106573819 coding upstream 22847 9679758 ~ 9689081 (-)
LOC110536579 LOC106593149 coding upstream 51891 9708802 ~ 9713188 (-)
LOC110508630 LOC106605751 coding upstream 286170 9943081 ~ 9960032 (-)
LOC110508696 ndufa3 coding upstream 344534 10001415 ~ 10002941 (-)
G222672 NA non-coding downstream 16386 9637249 ~ 9637907 (-)
G222661 NA non-coding downstream 31237 9612664 ~ 9623056 (-)
G222662 NA non-coding downstream 31359 9617625 ~ 9622934 (-)
G222658 NA non-coding downstream 54636 9595705 ~ 9599657 (-)
G222657 NA non-coding downstream 58963 9595020 ~ 9595330 (-)
G222680 NA non-coding upstream 222 9657133 ~ 9659694 (-)
G222685 NA non-coding upstream 19027 9675938 ~ 9676294 (-)
G222686 NA non-coding upstream 19569 9676480 ~ 9676700 (-)
G222665 NA non-coding upstream 75244 9732155 ~ 9735857 (-)
G222607 LOC106574954 other downstream 157440 9494796 ~ 9496853 (-)
LOC110501040 LOC106605812 other downstream 535920 9101425 ~ 9118437 (-)
G223070 NA other upstream 356050 10012961 ~ 10014892 (-)
LOC110508724 prpf31 other upstream 363737 10019313 ~ 10024005 (-)

Expression


Co-expression Network