Item | Value |
---|---|
gene id | LOC110508861 |
gene name | NA |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 10245328 ~ 10266902 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021589732.2 | False | 8337 | mRNA | 0.44 | 6 | 10245328 | 10266902 |
TU254548 | False | 2035 | lncRNA | 0.42 | 1 | 10263242 | 10265276 |
TU254549 | False | 3464 | lncRNA | 0.37 | 1 | 10263397 | 10266860 |
TU254551 | False | 1880 | lncRNA | 0.41 | 1 | 10263397 | 10265276 |
TU254550 | True | 1457 | lncRNA | 0.34 | 1 | 10265404 | 10266860 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110508838 | ube2s | coding | upstream | 5364 | 10233152 ~ 10239964 (+) |
LOC110508830 | LOC106592928 | coding | upstream | 18492 | 10180438 ~ 10226836 (+) |
LOC110508782 | LOC106605762 | coding | upstream | 104963 | 10135891 ~ 10140365 (+) |
LOC110508764 | LOC106577172 | coding | upstream | 150337 | 10078045 ~ 10094991 (+) |
cnot3a | NA | coding | upstream | 226887 | 10005877 ~ 10018441 (+) |
LOC110508845 | LOC106605771 | coding | downstream | 847 | 10267749 ~ 10276176 (+) |
LOC110508875 | LOC106605773 | coding | downstream | 11239 | 10278141 ~ 10287089 (+) |
LOC110520828 | NA | coding | downstream | 28562 | 10295464 ~ 10306199 (+) |
LOC110508886 | LOC106605776 | coding | downstream | 39946 | 10306848 ~ 10314535 (+) |
LOC110508924 | LOC106605777 | coding | downstream | 74027 | 10340929 ~ 10363673 (+) |
G222879 | NA | non-coding | upstream | 91633 | 10153218 ~ 10153695 (+) |
G222875 | grwd1 | non-coding | upstream | 95180 | 10149049 ~ 10150148 (+) |
G222858 | NA | non-coding | upstream | 116085 | 10129028 ~ 10129243 (+) |
G222855 | NA | non-coding | upstream | 121017 | 10124074 ~ 10124311 (+) |
G222783 | NA | non-coding | upstream | 128947 | 10115928 ~ 10116381 (+) |
G222910 | NA | non-coding | downstream | 22519 | 10289421 ~ 10289629 (+) |
G222911 | NA | non-coding | downstream | 23650 | 10290552 ~ 10290846 (+) |
G222916 | NA | non-coding | downstream | 32246 | 10299148 ~ 10299461 (+) |
G222918 | NA | non-coding | downstream | 35302 | 10302204 ~ 10303215 (+) |
G222919 | NA | non-coding | downstream | 37962 | 10304864 ~ 10305088 (+) |
sphk2 | LOC106605743 | other | upstream | 332230 | 9900809 ~ 9916529 (+) |
G222353 | LOC106573525 | other | upstream | 563576 | 9679760 ~ 9681752 (+) |
G222345 | LOC106594812 | other | upstream | 634189 | 9606305 ~ 9611139 (+) |
LOC110520820 | LOC107573682 | other | upstream | 738542 | 9490333 ~ 9508263 (+) |
G222287 | NA | other | upstream | 799624 | 9445047 ~ 9445704 (+) |
LOC110520833 | LOC106575226 | other | downstream | 449749 | 10716613 ~ 10767669 (+) |
cacng8b | LOC106576929 | other | downstream | 502771 | 10769638 ~ 10827279 (+) |
G223418 | u2af2 | other | downstream | 586800 | 10853702 ~ 10856200 (+) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|