LOC110520828


Basic Information

Item Value
gene id LOC110520828
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10295464 ~ 10306199 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110520828
ATGCGTGTCCAGAGAGGCTGCTGGGTAACGAGCGGAGAAGGACGTGTCCAAAACCCTGTACACAGGACAAGGACTGTGGCAACAAGCGCCAGTGTCTGTGACGGCCAGTGTGGCCTCAGCTGTGTGGCTcaagTGTGGCCTCAGCTGTGTGGCTccaggtacgtgtgtgtgttctggtttgTCAGTGTGGCCTCAGCTGTGTGGCTccagGTGCGTTGTGACACAGGCTACATGTTGCCCAATGGCTTGGATGCAGCCATCCGTCGTTGCCAAGGCGACCGACAATGGAGCAGTGATGATCCCAACTGCACAGCCCCCACCTCCCCCCAGGTCTCATGTCCTTTACCTGAGGAGTTGACCAACACCTTCAGCATCGATGGATCCACAGTCGCTGGAACAACCATTCGCtacacctgtctgtctggGGAGCTGGTGGGAAACAGTGAGAATCTCTGTAATATTGATCAGACCTGGCAGTACCCTCAGCCCATCTGtcaaaGGGTGTGGTGCCCGCCCCCCCCAGGAGGTGAACCAGGGGTACCTGGTGGCGGTACAGAGGACTGAGTACGATGTGGGTGATGCCATCTATTACCTCTGTAAGAAGAACCACCTGCTGGATGGACCCAACCGGGTCACCTGCCAGCCCAACAGCACCTGGAGTGCAGTGACCTACTGA

Function

NR:

description
beta-2-glycoprotein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110520828 True 676 mRNA 0.57 6 10295464 10306199

Neighbor

gene id symbol gene type direction distance location
LOC110508875 LOC106605773 coding upstream 8375 10278141 ~ 10287089 (+)
LOC110508845 LOC106605771 coding upstream 19288 10267749 ~ 10276176 (+)
LOC110508861 NA coding upstream 28562 10245328 ~ 10266902 (+)
LOC110508838 ube2s coding upstream 55500 10233152 ~ 10239964 (+)
LOC110508830 LOC106592928 coding upstream 68628 10180438 ~ 10226836 (+)
LOC110508886 LOC106605776 coding downstream 649 10306848 ~ 10314535 (+)
LOC110508924 LOC106605777 coding downstream 34730 10340929 ~ 10363673 (+)
LOC110520829 LOC102782376 coding downstream 125559 10431758 ~ 10605056 (+)
prkcg LOC105019084 coding downstream 354891 10661090 ~ 10701728 (+)
LOC110520833 LOC106575226 coding downstream 410414 10716613 ~ 10767669 (+)
G222911 NA non-coding upstream 4618 10290552 ~ 10290846 (+)
G222910 NA non-coding upstream 5835 10289421 ~ 10289629 (+)
G222879 NA non-coding upstream 141769 10153218 ~ 10153695 (+)
G222875 grwd1 non-coding upstream 145316 10149049 ~ 10150148 (+)
G222938 NA non-coding downstream 29644 10335843 ~ 10336320 (+)
G222939 NA non-coding downstream 30184 10336383 ~ 10336717 (+)
G222940 NA non-coding downstream 31170 10337369 ~ 10337761 (+)
G223226 NA non-coding downstream 85838 10392037 ~ 10392260 (+)
sphk2 LOC106605743 other upstream 382366 9900809 ~ 9916529 (+)
G222353 LOC106573525 other upstream 613712 9679760 ~ 9681752 (+)
G222345 LOC106594812 other upstream 684325 9606305 ~ 9611139 (+)
LOC110520820 LOC107573682 other upstream 788678 9490333 ~ 9508263 (+)
cacng8b LOC106576929 other downstream 463474 10769638 ~ 10827279 (+)
G223418 u2af2 other downstream 547503 10853702 ~ 10856200 (+)
LOC110508993 LOC106576906 other downstream 570558 10876757 ~ 10878635 (+)

Expression


Co-expression Network