prkcg (LOC105019084)



Basic Information


Item Value
gene id prkcg
gene name LOC105019084
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10661090 ~ 10701728 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036968582.1
tcccatCTTCTTCTTGGTAAAAAATAATCCATCTTAAAGAgaattccatctctccatctcttctccctcttcaccCTGTGTGGGTTAACTTAACAGATACATAGCAGTCCactcctcctctgtcttctctcGTTCTTGGAAAGCTTCAATCTCATCCCTTGTTACTTGCTCTTTTTTTGTAGGCAGCTCTTTTTCCCAGCTCTTCCTCCCTGCCACCACttgcctttctctctttccttcactttTTCTTTTTTGACGTGACCAGCGACAGGTTCAGAGCGATAGCAGGCTGCCTATCAAaggaggagagataaagagagggggagaggaagaggagaagcctGCTCTTTGATCAAGTCTGTCAGCCCAAACAACCACAAATACAggCAGCATGTCTACTCCCGTGTCCccgtccccctccctctcccccctgacCCTGGCCTCCCCCGTGGCCACCCCTGGggcctctcccctgccctcccccctcaccccccctcccAGGGTGCCAGTGTTCCAGAGGAAGGGGGCGCTGAAACACAAGAGGATCATCGAGGTCAAGGACCACCAGTTCACCGCTCGCTTCTTCAAACAGCCCACCTTCTGCAGCCACTGCACTGACTTTATctgGGGAATTGGAAAGCAGGGATTTCAATGTCAAGTGTGCAGTTTCTCTGTCCACAAACGATGTCACGAGTATGTAACCTTCACCTGTCCTGGAGCCCCCACTGCTCCTACAGAAgacttGAAGAGTAAACACAGATTTCGACCTCAGACCTACACTTCTCCAACATTCTGTGATCACTGTGGTTCTCTGCTCTATGGCCTTATCCAACAGGGCATGAAATGCTCCTGTTGTGAGATGAATGTCCACAAGCGTTGTGAGAGCCTGGTGCCCAGCCTGTGTGGTCAAGATCATACAGAGAAGAGAGGCAGGATCCACCTGACCGTCCGGGGAGAGAACGAGGACATCTTCATCACAGtgCGGGAGGCTCGTAACCTGATCCCCATGGACCCCAACGGTCTGTCTGACCCCTACGTAAAGCTCAAGCTAATCCCTGACCCCAAGAGCCAGAGCAAACAGAAGACCAAGACTATCCGCTCCACACTCAACCCCGTCTGGAACGAGAGCTTCaccttctcGGTGCGTGGGCGGCAGTGGGACCGGCGTCTGTCGGTGGAGGTGTGGGATTGGGATCGTACGTCTCGGAATGACTTCATGGGATCGCTGTCGTTCGGAGTGAGCGAGATATTCCGTCACTCAGTTAGCGGCTGGTTCAAACTGCTGGATCAGGATGAGGGAGAGTACTACAACATGCCTGTCCCTGACGAAAATGAGCCTAGTGGTCTAGATGCtattcccccctcccttctccccccctccctgAGGCCTGCccctgtgtctgtccctgtccccgtGTCTGTCCTGTCCCCCTCAATCCCGTCAGTCCCCTGTCTGGCCACCCTACCTGCAGGACCGGTCAAGCCCAGGGTTTGCCTCCAGGACTTCAACTTCCTCATGGTGCTGGGAAAAGGCAGCTTCGGAAAGgtACTGCtggctgaggagagaggaagtgagcGGCTGTTTGCGGTGAAGGTGTTGAAGAAGGATGTGCTGTTCCAGGATGAGGACACAGAGAGTGCCATGGTGGAGAGGAGGGTTCTGGGACTGGCCAACCGCCCCCACTTCCTCACAGCACTCTACTCAGCCTTCcagacagagGACCGTCTCTACTATGTGATGGAGTATGTCAACGGAGGAGACCTCATGTTTCACATCCAGATAGTTGGCAAGTTCAAAGAGCCTCACGCAGCgTTCTATGCAGCAGAGATAGCCATAGGCCTCTTCTTCCTCCATAATAAAGGAATCATCTACAGGGATCTGAAGCTGGATAATGTGTTGCTGGACAGTGAGGGTCATATAAAGATAGCTGATTTTGGGATGTGCAGGGAGGGCATGTTTGAAGGTGACACTACACGTACCTTCTGTGGGACCCCAGACTACATCGCACCAGAGATTGTAGCCTACCAGTCCTATGGTAAGGCAGTTGACTGGTGGTCGTATGGGGTGCTGCTCTATGAGATGTTGGCTGGACAGCCTCCCTTTGATGGTGTTGATGAGGAGGAGTTATTTCAGTCCATCATGGAGCAGAGTGTCTCCTATCCCAAGAGTCTGTCCCGTGAGGCCGTCGCCATCTGCAAGGGGCTCTTGACCAAGCACCCAGCGAAGCGACTGggcggaggggaggagggggagaaagagatacGGGAGCATCACTTCTTCCGTTGGATGGACTGGGACCGACTGGAGAGAATGGAGATACAGCCTCCCTTCAAACCCAGAACTggtgggAAGAAAGGGGAGAACTTTGACAAGTTCTTCACAGCGGCTCCGTCCGTGCTGACACCCTCTGACCCTGACGTTCTGGCGGCCATTGACCAGGAAGACTTCCTGGGCTTCTCCTTCATTAACCCTGAGCTCGCCCCCCCGACCCTCACTGCCATCTGAGGGgggcagctctgtctctctccacccacaCTTTTTTGAAGGGCACGACTCTATTTCGCTCTGCTCTCCGCTCTTTCGGAGGGGGCAGCTCTCTGTATTTTTATCCTCTTCTCTTGGTCTGAAGGgagcagctctgtctctctctatcctctctgtctgaggggggggggggggggggggctccccaCACATTCCCCTCACCGCCTAACAGTCATTTTCTAAAGAAAATAAGTTAAAAACAGAGAATAGCACACAATTTAAACACAAACAATCAGTATACACAACCTACAGATAACTCTCCCTCTGTGCTATACTCTAGAGCCTGAGTTCATGGCTTATTTTTCAGAGGAAAATCTGTGTGATACAGGGATGAATGGGCAGATTAGCGGTAAAAGTCAAATAACACATTTAGTTGATGCAATGCATACAAAACAACATTACTGTTATTTAAAGATGATGCAGTTAATTGCAAACAGATACCGTAAGATGACACTGAATCTGACTTAAATCTGTAGTGATGTTAAGGTAAATGTATTTTATGACATGGTATCATGCTATTGTAGTATCAATATCAGATCTATTACATAGAAATACAGCTAGAGCTGTCTATATGCCACATTTATCATCTATTACTTATGAAATTAATTACCTCTGATATTATGTAAAGCAGTATTTCTTGTGTCATGTAATGTCATATTGTGTTCTATTACATtgttctattatattattacccaAAAATTGCTCCTTGTTTTGTGTTTCCAATTGAACTTCAATCCATTGATGATATAATTGTGATATATAGCTAGAAACCTAGAAGATGGGTAAGAAATCAAAtcaatcattatatattactgcttGAAGAAAAGCTGCTCCTAATCAGTGATCTGGGATCAGATTCCCCTACCTGCCCCCAGTCCTAACTTTAACCGTTAGACCTGAGGTGAATGGTAACCATTCTTGAAAATGAAACCATCTAACCCTGTGTTCTGAGGTTAAGGGTTATTTTAATTAACTACATGATTACttactctcccatctccatcaacaaataaaatattttccACCA
>XM_036968583.1
tcccatCTTCTTCTTGGTAAAAAATAATCCATCTTAAAGAgaattccatctctccatctcttctccctcttcaccCTGTGTGGGTTAACTTAACAGATACATAGCAGTCCactcctcctctgtcttctctcGTTCTTGGAAAGCTTCAATCTCATCCCTTGTTACTTGCTCTTTTTTTGTAGGCAGCTCTTTTTCCCAGCTCTTCCTCCCTGCCACCACttgcctttctctctttccttcactttTTCTTTTTTGACGTGACCAGCGACAGGTTCAGAGCGATAGCAGGCTGCCTATCAAaggaggagagataaagagagggggagaggaagaggagaagcctGCTCTTTGATCAAGTCTGTCAGCCCAAACAACCACAAATACAggCAGCATGTCTACTCCCGTGTCCccgtccccctccctctcccccctgacCCTGGCCTCCCCCGTGGCCACCCCTGGggcctctcccctgccctcccccctcaccccccctcccAGGGTGCCAGTGTTCCAGAGGAAGGGGGCGCTGAAACACAAGAGGATCATCGAGGTCAAGGACCACCAGTTCACCGCTCGCTTCTTCAAACAGCCCACCTTCTGCAGCCACTGCACTGACTTTATctgGGGAATTGGAAAGCAGGGATTTCAATGTCAAGTGTGCAGTTTCTCTGTCCACAAACGATGTCACGAGTATGTAACCTTCACCTGTCCTGGAGCCCCCACTGCTCCTACAGAAgacttGAAGAGTAAACACAGATTTCGACCTCAGACCTACACTTCTCCAACATTCTGTGATCACTGTGGTTCTCTGCTCTATGGCCTTATCCAACAGGGCATGAAATGCTCCTGTTGTGAGATGAATGTCCACAAGCGTTGTGAGAGCCTGGTGCCCAGCCTGTGTGGTCAAGATCATACAGAGAAGAGAGGCAGGATCCACCTGACCGTCCGGGGAGAGAACGAGGACATCTTCATCACAGtgCGGGAGGCTCGTAACCTGATCCCCATGGACCCCAACGGTCTGTCTGACCCCTACGTAAAGCTCAAGCTAATCCCTGACCCCAAGAGCCAGAGCAAACAGAAGACCAAGACTATCCGCTCCACACTCAACCCCGTCTGGAACGAGAGCTTCaccttctcGGTGCGTGGGCGGCAGTGGGACCGGCGTCTGTCGGTGGAGGTGTGGGATTGGGATCGTACGTCTCGGAATGACTTCATGGGATCGCTGTCGTTCGGAGTGAGCGAGATATTCCGTCACTCAGTTAGCGGCTGGTTCAAACTGCTGGATCAGGATGAGGGAGAGTACTACAACATGCCTGTCCCTGACGAAAATGAGCCTAGTGGTCTAGATGCtattcccccctcccttctccccccctccctgAGGCCTGCccctgtgtctgtccctgtccccgtGTCTGTCCTGTCCCCCTCAATCCCGTCAGTCCCCTGTCTGGCCACCCTACCTGCAGGACCGGTCAAGCCCAGGGTTTGCCTCCAGGACTTCAACTTCCTCATGGTGCTGGGAAAAGGCAGCTTCGGAAAGgtACTGCtggctgaggagagaggaagtgagcGGCTGTTTGCGGTGAAGGTGTTGAAGAAGGATGTGCTGTTCCAGGATGAGGACACAGAGAGTGCCATGGTGGAGAGGAGGGTTCTGGGACTGGCCAACCGCCCCCACTTCCTCACAGCACTCTACTCAGCCTTCcagacagagGACCGTCTCTACTATGTGATGGAGTATGTCAACGGAGGAGACCTCATGTTTCACATCCAGATAGTTGGCAAGTTCAAAGAGCCTCACGCAGCgTTCTATGCAGCAGAGATAGCCATAGGCCTCTTCTTCCTCCATAATAAAGGAATCATCTACAGGGATCTGAAGCTGGATAATGTGTTGCTGGACAGTGAGGGTCATATAAAGATAGCTGATTTTGGGATGTGCAGGGAGGGCATGTTTGAAGGTGACACTACACGTACCTTCTGTGGGACCCCAGACTACATCGCACCAGAGATTGTAGCCTACCAGTCCTATGGTAAGGCAGTTGACTGGTGGTCGTATGGGGTGCTGCTCTATGAGATGTTGGCTGGACAGCCTCCCTTTGATGGTGTTGATGAGGAGGAGTTATTTCAGTCCATCATGGAGCAGAGTGTCTCCTATCCCAAGAGTCTGTCCCGTGAGGCCGTCGCCATCTGCAAGGGGCTCTTGACCAAGCACCCAGCGAAGCGACTGggcggaggggaggagggggagaaagagatacGGGAGCATCACTTCTTCCGTTGGATGGACTGGGACCGACTGGAGAGAATGGAGATACAGCCTCCCTTCAAACCCAGAACTggtgggAAGAAAGGGGAGAACTTTGACAAGTTCTTCACAGCGGCTCCGTCCGTGCTGACACCCTCTGACCCTGACGTTCTGGCGGCCATTGACCAGGAAGACTTCCTGGGCTTCTCCTTCATTAACCCTGAGCTCGCCCCCCCGACCCTCACTGCCATCTGAGGGGGGGCAGCTCTCTGTATTTTTATCCTCTTCTCTTGGTCTGAAGGgagcagctctgtctctctctatcctctctgtctgaggggggggggggggggggggctccccaCACATTCCCCTCACCGCCTAACAGTCATTTTCTAAAGAAAATAAGTTAAAAACAGAGAATAGCACACAATTTAAACACAAACAATCAGTATACACAACCTACAGATAACTCTCCCTCTGTGCTATACTCTAGAGCCTGAGTTCATGGCTTATTTTTCAGAGGAAAATCTGTGTGATACAGGGATGAATGGGCAGATTAGCGGTAAAAGTCAAATAACACATTTAGTTGATGCAATGCATACAAAACAACATTACTGTTATTTAAAGATGATGCAGTTAATTGCAAACAGATACCGTAAGATGACACTGAATCTGACTTAAATCTGTAGTGATGTTAAGGTAAATGTATTTTATGACATGGTATCATGCTATTGTAGTATCAATATCAGATCTATTACATAGAAATACAGCTAGAGCTGTCTATATGCCACATTTATCATCTATTACTTATGAAATTAATTACCTCTGATATTATGTAAAGCAGTATTTCTTGTGTCATGTAATGTCATATTGTGTTCTATTACATtgttctattatattattacccaAAAATTGCTCCTTGTTTTGTGTTTCCAATTGAACTTCAATCCATTGATGATATAATTGTGATATATAGCTAGAAACCTAGAAGATGGGTAAGAAATCAAAtcaatcattatatattactgcttGAAGAAAAGCTGCTCCTAATCAGTGATCTGGGATCAGATTCCCCTACCTGCCCCCAGTCCTAACTTTAACCGTTAGACCTGAGGTGAATGGTAACCATTCTTGAAAATGAAACCATCTAACCCTGTGTTCTGAGGTTAAGGGTTATTTTAATTAACTACATGATTACttactctcccatctccatcaacaaataaaatattttccACCA
>TU255030
ACCGCCTAACAGTCATTTTCTAAAGAAAATAAGTTAAAAACAGAGAATAGCACACAATTTAAACACAAACAATCAGTATACACAACCTACAGATAACTCTCCCTCTGTGCTATACTCTAGAGCCTGAGTTCATGGCTTATTTTTCAGAGGAAAATCTGTGTGATACAGGGATGAATGGGCAGATTAGCGGTAAAAGTCAAATAACACATTTAGTTGATGCAATGCATACAAAACAACATTACTGTTATTTAAAGATGATGCAGTTAATTGCAAACAGATACCGTAAGATGACACTGAATCTGACTTAAATCTGTAGTGATGTTAAGGTAAATGTATTTTATGACATGGTATCATGCTATTGTAGTATCAATATCAGATCTATTACATAGAAATACAGCTAGAGCTGTCTATATGCCACATTTATCATCTATTACTTATGAAATTAATTACCTCTGATATTATGTAAAGCAGTATTTCTTGTGTCATGTAATGTCATATTGTGTTCTATTACATtgttctattatattattacccaAAAATTGCTCCTTGTTTTGTGTTTCCAATTGAACTTCAATCCATTGATGATATAATTGTGATATATAGCTAGAAACCTAGAAGATGGGT

Function


NR:

description
PREDICTED: protein kinase C alpha type isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036968582.1 False 3572 mRNA 0.49 17 10661090 10701728
XM_036968583.1 False 3494 mRNA 0.49 18 10661090 10701728
TU255030 True 624 lncRNA 0.32 1 10700862 10701485

Neighbor


gene id symbol gene type direction distance location
LOC110520829 LOC102782376 coding upstream 56034 10431758 ~ 10605056 (+)
LOC110508924 LOC106605777 coding upstream 297417 10340929 ~ 10363673 (+)
LOC110508886 LOC106605776 coding upstream 346555 10306848 ~ 10314535 (+)
LOC110520828 NA coding upstream 354891 10295464 ~ 10306199 (+)
LOC110508875 LOC106605773 coding upstream 374001 10278141 ~ 10287089 (+)
LOC110520833 LOC106575226 coding downstream 14885 10716613 ~ 10767669 (+)
cacng8b LOC106576929 coding downstream 67910 10769638 ~ 10827279 (+)
LOC110508993 LOC106576906 coding downstream 175068 10876757 ~ 10878635 (+)
LOC110509020 LOC106605819 coding downstream 211353 10913081 ~ 10925718 (+)
isoc2 isoc2 coding downstream 240053 10941781 ~ 10944125 (+)
G223350 NA non-coding upstream 9947 10650821 ~ 10651143 (+)
G223349 NA non-coding upstream 11347 10649316 ~ 10649743 (+)
G223344 NA non-coding upstream 19771 10635605 ~ 10641319 (+)
G223339 NA non-coding upstream 23740 10625637 ~ 10637350 (+)
G223283 NA non-coding upstream 146452 10514385 ~ 10514638 (+)
G223255 NA non-coding downstream 1185 10702913 ~ 10704072 (+)
G223385 NA non-coding downstream 76155 10777883 ~ 10779973 (+)
G223381 NA non-coding downstream 125661 10827389 ~ 10829316 (+)
G223414 NA non-coding downstream 145917 10847645 ~ 10847885 (+)
LOC110508845 LOC106605771 other upstream 384917 10267749 ~ 10276176 (+)
sphk2 LOC106605743 other upstream 747992 9900809 ~ 9916529 (+)
G222353 LOC106573525 other upstream 979338 9679760 ~ 9681752 (+)
G222345 LOC106594812 other upstream 1049951 9606305 ~ 9611139 (+)
G223418 u2af2 other downstream 151974 10853702 ~ 10856200 (+)
G223434 LOC106595748 other downstream 248421 10950149 ~ 10952739 (+)

Expression



Co-expression Network