Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110508993 |
| gene name | LOC106576906 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 10876757 ~ 10878635 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transmembrane protein 238-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021589928.2 | False | 1354 | mRNA | 0.45 | 2 | 10876796 | 10878635 |
| TU255340 | True | 1150 | TUCP | 0.49 | 2 | 10876757 | 10878534 |
10,874,800
10,875,200
10,875,600
10,876,000
10,876,400
10,876,800
10,877,200
10,877,600
10,878,000
10,878,400
10,878,800
10,879,200
10,879,600
10,880,000
10,880,400
10,880,800
10,881,200
10,881,600
10,882,000
10,882,400
NC_048567.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cacng8b | LOC106576929 | coding | upstream | 49675 | 10769638 ~ 10827279 (+) |
| LOC110520833 | LOC106575226 | coding | upstream | 123979 | 10716613 ~ 10767669 (+) |
| prkcg | LOC105019084 | coding | upstream | 175068 | 10661090 ~ 10701728 (+) |
| LOC110520829 | LOC102782376 | coding | upstream | 271740 | 10431758 ~ 10605056 (+) |
| LOC110508924 | LOC106605777 | coding | upstream | 513123 | 10340929 ~ 10363673 (+) |
| LOC110509020 | LOC106605819 | coding | downstream | 34446 | 10913081 ~ 10925718 (+) |
| isoc2 | isoc2 | coding | downstream | 63146 | 10941781 ~ 10944125 (+) |
| foxj2 | LOC106605824 | coding | downstream | 66990 | 10945625 ~ 10947532 (+) |
| LOC110537149 | LOC106591073 | coding | downstream | 104185 | 10982780 ~ 10995885 (+) |
| mfap5 | LOC106575133 | coding | downstream | 157603 | 11036238 ~ 11041281 (+) |
| G223424 | NA | non-coding | upstream | 4612 | 10868327 ~ 10872184 (+) |
| G223421 | NA | non-coding | upstream | 18919 | 10857553 ~ 10857877 (+) |
| G223414 | NA | non-coding | upstream | 28911 | 10847645 ~ 10847885 (+) |
| G223381 | NA | non-coding | upstream | 47480 | 10827389 ~ 10829316 (+) |
| G223385 | NA | non-coding | upstream | 96823 | 10777883 ~ 10779973 (+) |
| G223441 | NA | non-coding | downstream | 21961 | 10900596 ~ 10900908 (+) |
| G223444 | NA | non-coding | downstream | 24544 | 10903179 ~ 10903526 (+) |
| G223449 | NA | non-coding | downstream | 30817 | 10909452 ~ 10909682 (+) |
| G223433 | NA | non-coding | downstream | 70308 | 10948943 ~ 10950025 (+) |
| G223418 | u2af2 | other | upstream | 20596 | 10853702 ~ 10856200 (+) |
| LOC110508886 | LOC106605776 | other | upstream | 564544 | 10306848 ~ 10314535 (+) |
| LOC110508845 | LOC106605771 | other | upstream | 600623 | 10267749 ~ 10276176 (+) |
| G223434 | LOC106595748 | other | downstream | 71514 | 10950149 ~ 10952739 (+) |
| G223748 | NA | other | downstream | 163213 | 11041848 ~ 11043692 (+) |
| LOC110509074 | LOC106576860 | other | downstream | 288374 | 11166919 ~ 11174363 (+) |
