isoc2 (isoc2)


Basic Information

Item Value
gene id isoc2
gene name isoc2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10941781 ~ 10944125 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623027.2
GCACTAGATTCTGACACGCACTCGTTATGGGGAAAACGCTGCATGCTATTGGCCGAAACCAATGTCAATGTTCAATGCATCTCATTCGATTGGTGTATTGGAAATTGGGGCGTTTTAGGGTAATTTGTGAACAGTGGTCGTAGTTGACAGTTGATCTCTTGGTTTTTCCATCTATTCGTGAATTGTTGAGATTTTGCTAATAAGGAGGGGGTGTCAACTGTCCGGTAGCTGAAGAAAGTTGGACCTTCAAGTTCAACCATTCCACACGTCGACCCCCCACTATCAACTATCAACATGGCAGGGATTGGCAGACTGTCAACAAAGGGCTCAGTACTCTTACTGTGTGACATGCAGGAGAAGTTCAGACCCAACATCTTCCAGTTCACCAACATTGTCAGCAACGCAGCCAGACtgctacagGCAGCCCGTGTTCTGGGCATCCCCCCCATAGTGACAGAGCAGTACCCTAAAGGCCTGGGTCCCACGGTGCCTGAGCTGGGGGCTGGGGACCTGACAGCCCACGCCAAGACCAAGTTCACCATGATGATAGAGCCAGTGGAGAAGGAGCTCAAAGCCCTGGGAGATCCCAAGATAGCCATCCTCTGTGGGATAGAGACACAGGCCTGCATCGCGTGCACGACCTTTGACCTGCTGGAGAAGGGTATGGAGGTGCATATCGTGGCTGATGCCGTCTCATCCAGAAGTCAGACAGACCGGTTGTTTGCCCTGTCCCGGTTGAGGCAGAGTGGAGCCTTCCTGACCACCACAGAGGCCGTCCTACTACAGCTAGTGCAAGATGCCCAACACCCCAACTTTAGAGAGATCCAGAAGCTGTTGGTCCAGCCATCCCCTGACACAGCCTTGCTGGCCTTCTTCAGCTCTCTGTAGAGAAGACAAGCTCCTTCTTGTTGTCTGTGAAATCATCTGAAACACTGTGTGAACACAAGTACGGAAATAAACCCATGCTGCTGTTTTCCATGCTGA

Function

symbol description
isoc2 Predicted to be active in cytoplasm. Orthologous to human ISOC2 (isochorismatase domain containing 2).

NR:

description
isochorismatase domain-containing protein 2

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623027.2 True 984 mRNA 0.51 7 10941781 10944125

Neighbor

gene id symbol gene type direction distance location
LOC110509020 LOC106605819 coding upstream 16063 10913081 ~ 10925718 (+)
LOC110508993 LOC106576906 coding upstream 63146 10876757 ~ 10878635 (+)
cacng8b LOC106576929 coding upstream 114660 10769638 ~ 10827279 (+)
LOC110520833 LOC106575226 coding upstream 188964 10716613 ~ 10767669 (+)
prkcg LOC105019084 coding upstream 240053 10661090 ~ 10701728 (+)
foxj2 LOC106605824 coding downstream 1500 10945625 ~ 10947532 (+)
LOC110537149 LOC106591073 coding downstream 38695 10982780 ~ 10995885 (+)
mfap5 LOC106575133 coding downstream 92113 11036238 ~ 11041281 (+)
LOC110509074 LOC106576860 coding downstream 222794 11166919 ~ 11174363 (+)
LOC110509082 gtr3 coding downstream 244833 11188958 ~ 11216832 (+)
G223449 NA non-coding upstream 32099 10909452 ~ 10909682 (+)
G223444 NA non-coding upstream 38255 10903179 ~ 10903526 (+)
G223441 NA non-coding upstream 40873 10900596 ~ 10900908 (+)
G223424 NA non-coding upstream 69597 10868327 ~ 10872184 (+)
G223421 NA non-coding upstream 83904 10857553 ~ 10857877 (+)
G223433 NA non-coding downstream 4818 10948943 ~ 10950025 (+)
G223752 NA non-coding downstream 44950 10989075 ~ 10989274 (+)
G223757 NA non-coding downstream 58005 11002130 ~ 11002335 (+)
G223775 LOC106605829 non-coding downstream 128493 11072618 ~ 11077866 (+)
G223418 u2af2 other upstream 85581 10853702 ~ 10856200 (+)
LOC110508886 LOC106605776 other upstream 629529 10306848 ~ 10314535 (+)
G223434 LOC106595748 other downstream 6024 10950149 ~ 10952739 (+)
G223748 NA other downstream 97723 11041848 ~ 11043692 (+)

Expression


Co-expression Network