LOC110510606 (LOC106605835)


Basic Information

Item Value
gene id LOC110510606
gene name LOC106605835
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11370632 ~ 11386718 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968814.1
TCCTGTATTTGGTGAGAGAGGAATGGAgcaggagagtgagagagtgagagagagatagtgagtcaGCGAGCTTTATCTCGGGGTCAACAGTAACTGATCACGTCAGTGTTGGAGGAAGGAGAACAGATTGATTTGTGAGATACAGTCCGCAGCCTTTCATTTGCTTTGTCCAGATTCCTCTGTTCATTAACAGCGGCTGTGAAGACAAGACAGAGACAAAAAGAGGAGGGGGAAGATAAGTGTCAATCTGTTCAGACTTGTTTGGGAATTtgagcagggaaggagggaggaggggtgaaaCAGCAAccgggagaagagcagaggggagaggttgacagacagaccgagaaggAAACCGATGCGGAGCGAGACAGAGGGTCAGGATTGGATTAAAGTTGAAATATAATTTTGTTCGCCAttctgacaccccccccccccccccccccttgcttgTGTTGTGCAATCGTTGTTAGTTTACACTACTGAACTAACTGAGAGctgcagagagaagggagactgGACATCTCTAGCGTACTAAACTCAGGTTCTAAAAAAAGTATGTTACCATGGGGACCAAACGTCCCAGTCTGACTCCCTTTGATACATTTGATCCATCCAATCAAAGCGCTTCCTACCGGAACCCTCAGCCAATCAGCCAGATCTACCGCGAAACAAGTCCCAGACCTGGAACTGTGGCCCGGACAGACCGAGACAGGGAGAGGATccaagaggaggaatggaggagagaaagagaaatggagagattgAAGGACAAAACAAGAAATAGAAGAAAAGAGATGGAACCCGGAccaagagagaggaacagagagaaggagtgtgCCCTCATatccagagggagggaggaggaaagggaatggagagagagagaaagggggggagcgggagagagacgtGCCAATGGAAGACCTACTTCAAATCTGGAGATCAGGaaccacagagacagagaaaaggagagaaagaaaggagacaCGTTTCCTAGAATGGTAAAACAtagcaaagagagagacagaagaatacGTGCATTTGTGGAGGAAGATGTGGGGAAAGAAGGAATGAGACAATTGGAGAGACCGAAGGGAACAGAGATGGACGactgggagagagaacgagagacagcaGCAAAGATACAGCGGTATCGAGATGCAGAGAGGGACTTCCAaaggcacagagagagggagagggagaaggagagaatcggggcacaggaggacagagagagaaatggaggaaaGCCCATGGAGGATAAGACAgtgagacggagggagagagcgagggaagcgGAGCCAGATttcagagagaggagaagagagagggactcAAAGGGTAATGACCTACGGAGCAAAAGAGAGAGgtatatggatggagagagagagaggtcaaaactctggcagggagaaagagaggatggaagaagagagggagattcaCAGAACTATTCCGATAGAGAGggcagggatggaaggagggaaggaaatacagagggacagagggacaccAGGAGTGAGGGAGACagtgatggagagaagaggaaagagagagtgagagatgacaACAGAAGAGAACTGAAACATCTGCACAGTAAAAGTGAGGGGGACACTGAGGGGAACGCAGCatgggatagagtgagggagaaagagaaggagagacagaaatggagagggggggagatatacagagagagggatggaaggagagatgcttatagagagagagttagggaaggggacagggatggaAAGAGTGacatggagagatacagagagagggacaggagaaaagtgagggaagtggagagagagagggatgaggtgaGAGAAGGGGGCAGGCGAGAGGACAGACCAAGGGAAAGGAGGGACCTAGAGAAAGTGAGGGTGGGAACACAGCCCAATGTAACTGGAGAGAGAAGGAAgcggatggatggagagagattcagagagagggagagatattccaagggggaggatgaagagaggaggcgcagggagaagagggacagagagacagatctcaaaagggagggaggagcagacgGAGCTAGTCGATCGCTGAGCGAGACAGCCCCAAGGGTGCCACCACGAGTCCAGAGCAGCGGAGAATGGAGCAGTGACatagagaaggaaagaaaatggagaagaggaagagaaagtcATGAAGAGaaggagtcagagggagagaaggatgtggacagggggcagagagactgtagtgaaagagagagaccagatagagtgagggggagagaagaaggaaaggaagagacgatACCAAAGCGCCCTGAGCAGAGGAGGATGTGGTTATTACCACAGAGGGTCAGATATAACAAAGACTCCTCTTTAGAGGATGAGGTTATAGAGCGAGAAAGAGATAGGCAcactaacagatggagagagagaagtgaagaaGAGGACAGATCCGTGGAACAAAGGAcaggcagagaaaaagagaggaagacagagggagaaggacaagAGGACAGATCCGTGGAACAAAGGAcaggcagagaaaaagagaggaagacagagggagaaggacaagAGGACAGATCCGTGGAACAAAGGAcaggcagagaaaaagagaggaagacagagggagaaggacaagAGGACAGATCCGTGGAACAAAGGAcaggcagagaaaaagagaggaagacagagggagaaggacaagAGGATAGGCCGGTGGAACAAAGAAAGTCCATAGACGAAGAGAGAGaagctgagagggagggagggagggagaggtatttGGAGAGAGGGTTAAATGTAGATGAAGACGATGAGACAGAAGCCTGGAGGAGTTAtagcagaggagaggaacacCAGACTtacagcgatggagagagagaggaacgctggcagagggacagggagacggagagagagaatgtgacagATAACACAGAAGGTGACAGTGAGGAAGAAGGAGGAAGTGATAGATATACACTCTTCGAGAGCGATGGAGGAAGTGATAGAgagtgggaaggagggagggatagaatcGCTTCCTCTGAGGACGGCTTTATCACTGTGTCCAGTGGTGGAGAAGAGGAGTTTGAGGACTGCAAGGAATTCTTGGAAGTTGGGGTTGCTATTCATGTTACCAGGCAACCTGTTAGCTTTcaggggagcgagggagagatgaagagaggtggagggagaagacatgaaagagagagagaaagaacagaagagaggacagagcaaAAGGATGATGCAGTGGTGGGAGAGGTGAATGATGGAAAGGGGAAGAAGCAACCAACCTATGTATTCTGTGTGATTGGGCAAACACTGCCCAGGTCAAAACCCAATCAGACAGCAGTCTTGGGTGACATGGAATCAGAGCGGACCAATCAAAATCCTGGATATGGTCATAGGGacagtgatgacatcacacaccTCCCTCATGAGAACCCTTCCAGAGATGGAGACCAAGGGGCAGAGGATGAGAGAAAAATAGTGAGGGATGAGATCCATGTGCCAaaggaggagagaacagacacagaaGAGAGCTCCATAGTGGACGTCAGTCACACCACCCTAGAACAAGAGAGCGGAGAACGACTGAAGGTCATGGAGGAGAACCCATACGCTGAGATAGAGCGAAGGAGGAACTCTGAGACCGAAAAACTCCTCAAAGAGTGGAGAGAAAGACATGAAGAGTACACAGAAACAAGAGAGAGGGACCCAAcagacaggaggaggacagaacCAGAGATAGGTCCATCTTCACATCCCAGTGGAGAGTACCACCACCATGGGATCCCTGTAGTTGACCAAGCCACCTCTGACCAAAATGACCCTGGAGTGATGAGCCCAGAGGAAGCTGTGGCCATCCAAATCTGTATAAGTGAAGCCTGGAGCACAGAAGAGGAGGCCAAGCGCCACTCCCAGCCCTCACACATGAAGTGGGCCAAGAACGTATTGAGCGAAATCCTTGGCAGCTCGGAGGAACCAGCCCTCAGCAACCCCCAGCCAGAGTCACAGGGAAGTCAAGAGGTCAGCCAGACTGCGAGAGGGACCGAGAGGGTAGAAGAGGAGCTAGAGGAAGAAAAGGATGAGACGCTAGAGGGGGGAGGAGCCTCAACCGTCTACGCCACGGTTCAGAAGAGGAAGAAGCGTGGGAGGAAGTCGGTGGAGGAGAGGCTGGTTGAACGGGAGGCAGAGCCAGGGAAGCTGGAGGATGAGAGAGGTACAGGGGAGAAACTAACAGACGTGCATGCTGAGGCTTTCACAGCTATGCTTGGTGATGGCAAACCCATAGACATGCATGCTGCTCTGACCCTACACAATACTCATGGTGACACacctacagacacacagggagaggaggtggagggtaaCAATGTGTGTgcggacagacaaacagacagtcaTATACATATCCAGGTAGAGATGGTGACAGAGgatgagggtgagatggagaaagGGGTCGAAGTTGGGGACGAGGTTCATATACTGGATGCAGAGAAAGAAGCGAATTCCCAGAAAGAGGAagatctgtttctctctgtgagcAACACCCTGTACAAACCAACCAGCTGCCCCAGCCTTATATACAACCCTGATTCAGAACAACCTATCACCACCACAGAGGAAAAGACggaggaagaaggggagaaagagaggactgtGGGAGATGGGGAAGAGAATAGTGTGGTAGAGAGGAAGCAGGAAAGAAGGATCGAGGATGGGACCGAGGACATTGGGAAAGTGGGAGAGGCGACTGAGGAAAGGAAagtggaaagggaggaggagaagagggtaggaggggaagaggagaggatgagggagggcaAGGAAGAGAGTAAAAAAacgggaggagggggggtgaagAGCACTTGTAGCTTCCAAGATTTGGGCACCGATGTTCGGTATAGGAGGCGGGGGTTCCGCAAGACAACAGAAAGAAGAAacgaggaagaagaagaaggaagaggagatgCGAGGGATCGCAGAACAAGAATATTCCAGGCGTcagatgatgatgaggaggaggaggtgaactTCAACTGGGGAGATGTGGATCTGAGGAATGTCACGGATACCATCAGAATGGCTAGGAGGAACTCCAAATTTTACAATTCACAGCTCTACCAGGAGTACAGTGAGACGGCTCAGAACAGGGAGATCCTCAGTCAGTCTTGCTCTGACGCCCTCTCCATCTACGAGGAgctccctgtccccctgtcccccgTACCCCCCTCTCTGGCCCCCTCGCTTCCTCCGGCACGCAGGCCCTTACCCTGTCTCCCCCCAGTCATCCACCCCCACTCTCTGTCCCACTCTGGCTCTACCTCCAGTGGCACCAGTGCCAAGTTCCTACCCGTACCACAGCCGCCCCAGCCCCCCCCGGCCAGGCCTTCCTCTCCCcgcctctccatctccctcacccAGTCCCCCAGCCTGTGGCAAGAGATCCCTGAGGTCAGGAACAGTGCTGCGTTTGGGGAGCTGACTAACGACCAGAGACGCCTGCAggagGTGCAGTTTGAGGTTGTAACTTCAGAAGCGTCATACTGTCGTAGTCTGGATATTGTGGTGGATCACTTTGTCAAGTCTAAGCAGCTCGGGGAGCTGTTGACTACTCAGGACAGGAGCTGGCTGTTCTCCAGGCTGGCTGATGTCCGAGCCATCAGCCACAGTTTTCTGTCGAAGCTGGAAGAGAGGGTGGAATCTGATATGATGCACTTCACCGTGTGTGACATCATCGCTCGCCACTGTCAACGCTTCAAGAAGGTCTACGTGCCCTACCTCACCAACCAATCATATCAGGATGCCACTTACCAGAGACTCATGGATGAGAACCAAGGGTTCAGGCGGGTAGTGGAGAAGTTGGAACGCAGTCCAGTGTGTCAGCGCCTTCCTCTTCGCTCCTTCCTCATCCTCCCCTTCCAGAGGATCACACGAATCAAACTCCTTGtgcagAACATTGTGAAGAGAACAGCCCAAGGCACAGAGGAGGAGGTCCAGGCCATCAAAGCTATGAAGCTACTGGAGAGGTTGATCCAGGAGAGCAATGACAGTATTACTCAGATGAAGAGCATTGAGTCGCTGGTCTCTCTCAGTGCCAGAGTGGACTTTGAATGCAGGactcTCCCCCTGGTCAGTCAGTCTCGTAGGCTGGTGAGAGAGGGACCGGTGACTGAGATGATGGATTTCTCtctgaaggagacagagaggagcgtCTACCTTCACCTCTTCAATGACTACCTGCTGCTGTCGCTGAACAAAGAAGGGGGCAGGTTCACGGTGATAGACCATGCTCCAGTGTCAGAACTGCGAGCTGAGAACTGTCGGGTCAAACTGCACTCTCTAGAGAAGAACCTTTTCCGCCTCCACCTTAACAAGAAAGCCCTGCTACTTAGCACCGACACACAAGGTGATAAACTGCGTTGGATCTCAGCGGTCTCCAGGCCCCATCCTGTTATTGACTACTCTGCAGAACAAGACTTCACACAGATGCAGTGCGTCCGAGCCTTCGTTGCCCACCAACCAGATGAGCTGTCCCTGGAGAAGGCTGAGGTCATTCTCGTCCACCAGCAGAGCAGCGACGGTTGGGTGGAGGGGACCAGgctgtcagacagacacagaggatgGACTCCTGAGTCCCATTTGGAAACCATAGCCAGCCTCAGGGTCCGACAGCGCAACCTGCTGGATGCTCTAAAAATTACCACAGCCACGGCTGCAGTATGACAAACCATCCACTGTCTGACTGCGCTGGGGGAATCCTAGTCACTGTGTATCAATGTGGTGGAGTTACTGGGGACATGTGGATTTGGACAGTGGATGAAACATAGTGTTTCTGGAGTTGGCCTTCCCGGCCTCAGCCTGCTTATTGGGGATGAATGGCAAGGGGATGAATGGCTTTAGAGGGGGTGCCTTAGAGAGAGGCACTGGACTGACATGAATACCTTTAACACTTACAGGAGTGTCAACGTAAATTATTGGAAGGGTTTTGGAGGTGTCTGGGAGTGTCTAGGGTAGCCTTGTAAATCAAACCTTGCGAATGAATGCCGATTGACTGTTACAGGATCTATTGGAAATCAGCCATCTAAGAACATCAGTGGATTGAGGACCTGTGGCCCCGGAGAAGGACAGAAGTTTCTCCATAACTACTTTACTTGGGGACTTTAAAAAGACATGGTATGGggccttccgagtggcgcagcggtctaaggccgcTACaggtcactacagacctgggttcgatcccaggctctgtcacagccggccacgacccgggagacccatgaggcggcatacaattggcccagcgtcgtccgggttaggggaaggtttggccggctgggatgtcctcgtcccattgtgctctagtgactcctgcaCGCTGACTTCGTTTGCCaattgtacagtgtttcctccacattggctggcttctgggttaagcaagcagttTTGGAAGACGcctggctctcgaccttcgcctctcccgagtccgtacaggagttgcagcgatgagacaagactataactaccaattggatatcacaaaaaaggggtaaaaagtacaaaaACAAAAATAAGACATGGTATGTGTTTTGCAATAGAGGTTATTGTATTTGAAGAAAATGTTTCTACATATTCAGGGAAATGTATTATTTGTGTATATTACAAAGATTTTCATAAAGTACTTTTATGGGGTACATATTTGCTGACGGCTCAAATTGAATAGTTCTGCTGCtctatgtttactacatacttcAGTCTAAGTAAGACTGCCATCGTTGAAGTCGTTTGTGGTGACGTCTaaatgaggggtgttgtacaaaacaaatgaaTCAGctttaaccaatcagagtatcaaagccaatgacaaaTGTTTTAAAACGCCGCTTTAACGACGTGTGCACTGGATCTGGCCCAACCCattggtttctgggaccaatcagaacggttAGAATGTGTTTGCTTTCTAGAAATCGTCAGGGAGGTACTCAGATTCAGATCCGGAGAAGAAACTAATGTCTGTGGGCAAGGAGTAGCATTTGGCTGGAGCAAAGAGTTTGAGTAGCCAGACAAGGATACTTAATCCCATTTGAGATACAGAAGACTATGAGATAAAGAGAGTTTGTATGCACATTGTTAAGAATGTTGAAAGGGCTGTAAGTGCAATACATTTCCAGGACTGTGCATGTAGCCTACACAATTTGATTTTATGAAAAAGAGGTGCAATGATCAAAATAAGCAGTTCTGTCTGTGTTGAGGAGACTGAGAAAGTATGCTTTGGAAATAAATGACAATACTCATGAA

Function

NR:

description
PREDICTED: trichohyalin-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968814.1 True 8294 mRNA 0.51 15 11370632 11386718
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110509134 LOC106576832 coding downstream 2401 11365423 ~ 11368231 (-)
LOC110509113 c209e coding downstream 6787 11359013 ~ 11363845 (-)
rasip1 LOC106605844 coding downstream 205662 11151396 ~ 11164970 (-)
LOC110509048 il-11 coding downstream 283503 11079975 ~ 11087129 (-)
znf628 LOC106605829 coding downstream 291062 11068525 ~ 11079570 (-)
styk1b LOC106576787 coding upstream 38075 11424793 ~ 11432989 (-)
LOC110509171 LOC100196661 coding upstream 46400 11433118 ~ 11436628 (-)
LOC110509245 LOC106576972 coding upstream 62540 11449258 ~ 11454366 (-)
fam131bb fam131b coding upstream 117149 11503867 ~ 11548741 (-)
LOC110509335 NA coding upstream 226495 11613213 ~ 11614838 (-)
G224679 NA non-coding downstream 12216 11358172 ~ 11358416 (-)
G224676 NA non-coding downstream 17606 11346661 ~ 11353026 (-)
G223969 LOC106605840 non-coding downstream 92004 11275917 ~ 11278628 (-)
G223949 LOC100846954 non-coding downstream 145802 11216565 ~ 11224830 (-)
G223950 NA non-coding downstream 190749 11178455 ~ 11179883 (-)
G224692 NA non-coding upstream 4305 11391023 ~ 11392426 (-)
G224693 NA non-coding upstream 5896 11392614 ~ 11393104 (-)
G224699 NA non-coding upstream 20882 11407600 ~ 11407909 (-)
G224702 LOC106576792 non-coding upstream 26989 11413707 ~ 11414069 (-)
G224706 NA non-coding upstream 35027 11421745 ~ 11423947 (-)
G223942 LOC106576860 other downstream 196265 11172120 ~ 11174367 (-)
LOC110508724 prpf31 other downstream 1347429 10019313 ~ 10024005 (-)
G223070 NA other downstream 1355740 10012961 ~ 10014892 (-)
LOC110509576 LOC106576947 other upstream 340644 11727284 ~ 11741584 (-)
G224869 NA other upstream 366133 11752851 ~ 11753680 (-)
G224873 NA other upstream 409172 11795890 ~ 11796309 (-)
LOC110509592 LOC100136300 other upstream 422065 11808113 ~ 11811663 (-)
G224954 LOC106576536 other upstream 628208 12014926 ~ 12016101 (-)

Expression

LOC110510606(LOC106605835) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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LOC110510606(LOC106605835) Expression in each Bioproject

Bar chart with 21 bars.
LOC110510606(LOC106605835) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network