LOC110520911 (zyx)


Basic Information

Item Value
gene id LOC110520911
gene name zyx
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11580308 ~ 11600483 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968965.1
agagagggggatctaACAGCTGTAGGGgaactgagagagagggggggtagaggaaaGTTAACAAGCACACTTTCTTTCTGTGTCGGTTTGGATCTACAGCTAGGGAAAAGGAGAAGGAAGAGATACTGTAGGGGGGTTAATAGTTTGCTCTCCCAACTGCACACATAGaCAGTAAAACGACAACATGGCTGAATCCAGCGGTAGTAAACCCTTCATGGTGACTTCCTCCATCAACCTCAAAGTCACCACCCCCTCCTTCTACAACCAGCCAAAGAAGTTTGCCTCGGTCAACCCGCCGCGCCCCAAAAGCCAGTCCGACCCGTGGCCTCCCCCGGGCTCAACTCCTCCCGCaggtccctctcctccccccagcctGGTCTCAACACGCGGTGTCGGCACAGCTGTCATTGGTCGAGTTGGAGTGATGCCTCCACCCCCACCATCGCTCTGCGAAGACTTCCcgccccctcctcctccgttgGACGATGAGCTGCCAGCCCCTCCCCCCAACTGTGCAACCACACCCCCAGCCTCTGATGCCCCTCCCCCtgccttccctccccctcccgcGGTGGATGACCTGCCCCTCCCCCCCGCCCCGCTTGAGGAGAATGCCTGTCTCCCCCGTTCcccgtctccccctcctccaccaccccctccccctctcccagtctctggtcCCAGCAGTGTCCCCAGTGCTGGGGAGAACTTTCAGCGTCTGGCAAAACAGACTAGTTTTGACAAACAGCTGGATTCTCTGACTGACCTGCTCTCTGAGATGGAGACCAGAGGACCCTTCAACCCCAAGTTGCCCAGTCAGTactcagctcctcctcctcctgcccccaAGCCTGCAGGTCCTCCCCCCACTGCTCCCAAGCccaacctctccttcctcccccctccagaGATGGGAGACAAGCCCCCTCCCGCTCCCTGGGCCGAGGAGCTCAAACTCCGGACGACACACAGACAAGCCAATAACCCTATATCCGCCCCAGCTCCTGCTCCTGCCCCACAGCCATTTGCTAAAGCCCCAGTCGTGGCTCCTAAGGCTTTTGGGGACATGAAAACGGGGACGTTCGTGTCTCCTGTGGGGCTGAAGAACCAGAACCACGCCCCGGCTCCATTTGGTGTTGCTCCTAAACCTTCCCCTGCAGCcagctccttccctcctcctcctgccgcTCCTCCCGCCCCACCAGCCAACAAAGTGGCTCCCCCAGCCTTCAATCACTCAAAGCCCTCTTCCATTGACTCTCAGATGACTGTGAGCCCACCCCCTCCTGCTCCCGTGCACCCTCCTCAGCCCAAAGCGATGACATCACCACCTTCTTCTTTCAGCCAGCCAATGAAATCTCCCCCTTCATCAAAGCCCTCGCCTCCTGGGCCTGTCTCTGTCCCAGGTGGAGGTGTTCCTCTCTCcatgagggaggtggaggagctggagagaATGACCAATGCATTCATCAAAGACATGGACACACACGCTCCCGTCATCACCTCAGcacctacagAGGTATGTGGTAAGTGTGGTGAGGCTCTGTCTCGTTCCCAGCCTGCAGTGAGAGCCATGAACAAACTCTTCCACTCTGACTGTTTCTGCTGTATGAGCTGCCATCGCCCCCTGCAGGGCATGCAGTTCTACGACAAGGACGGGACGCCACAGTGTGACGACTGCTACACTagTTCTCTGGCGGTGTGTTCTCGGTGTGGGGAGCGTATTACAGACCGTGTGTTGAAGGCGGTGGGCCAGTGTTTCCATGCCCATTGTTTCCGCTGCTGCACCTGCGCCTGCAGCCTGGAGGGGGCGCCCTTCATCACCGACGAcgacaacaacccatactgtgTCCCAGACTACCACAGGCGTTTCTCTCCCCTGTGTGTGAGCTGTAATGAGCCCATAGTTCCTGACGCCGGCAGTCAAGAGACCGTCAGAGTCGTGGCCCTCGACAAGAACTTCCACCTCAAGTGCTACCGCTGTGAGGATTGTTCCCGCCCCCTCTCCATAGAGGCGGACGCAGACGGCTGCTACCCATTGGACGGCAGGATCCTGTGCATGAAGTGCCACACCCAGCGGGCCAAGGCTATGCAGTGATTGGTGGACACATCTGTTATTCAAGTCAAACTTTGAACCAAATCCAAGACGGGATCCATTCAGCTTCCACCATTCTGTATTTGCAACAGGGCTTTacttgtgagtgagtgagtgagtgagtatgttTGCATGCAGATGTCgttatgtctctctcctctttctgcttATTCCCCCTCTCAGTCCAGAGGTAATGTACTGCACTGAGAgactccattcctcctccccttctccccttgtGTTAATGCCAGTGTTATCAAGGCCATTTTTTGTTTATGCTTAAATTCCCAGCATGACTTGCACAAGTATAGCTTAGTCATGGGCTGTCCCAACAGTCAAAGatggtttcctctcctcttctctctccactgaTAGGAAAACATGTTGAGAAGGTTTCAGCCTTAAAACTTTGATTTGTCTTTCACTTTTCAGTGGTAAGGAAGGAAAAGAGTGGAAGTATTTCAGAGTGAGACATAGTAAGATGAAGTTGACCCTaaatgctgatcttgggtcagtctTGCAATCCCCCCCTTACTGATTATGGTTAGATCTTAGATCTGTGCCTACTGGCAACTTTTCCCAGAAGTTTAGTGTAACCCCCTGACCCCAGTGCATGAGGAGTTGAACAAAAGTTTAAGGTGGACTAATTCATGTTCCCCTGCACCTCCCATAGGGCTGAGCTCTGGTGGGCTGGTGGCACATGAAGCACTTTGGAGTGCCTGCAAACATACAAGTTACTTAACTGCCTTTAGAGAGTGCTTTCTAGAGAACTACATATCCCACCAGACACAATGTAGCAGAGCAGTGTGTTGTAGGAAATGTAGTTCCTCTTGGGCTAAAAACTgagtgcaaaaaaatatatatatatatatgtgaatgTCGCTCTcgtttgtttttgttgtgtgtgtttgttgctttATAGGCATGCATAGCTACAGATCACTGTCAGTTACTCTCACCAGTTTGTCAAGCACAGAATGAGGGTACAATACGATCAAAATGACCATTTATTTCTTTGTCAAAAGAATAGAAGATTTAAGATCATGATTAGAGACACTACCTAGAACAAAGGTCAAAAGTTAGCCCAGCACAGATTCCATTCCTATGATCTCCTCATGTTAAATAGAGTGCTGTAGTTTAAAGAGGACCACATGGCTTAGAACAGAACCTACGCTACAGGCAGAAgttgctcttaaccgctaggatcagattaccctacCCCATCCCTAATCTTAATTTAAAGGGGATGGAGGGAAAACGTCGGATCCTGCATCAGTAGTTAGGGGCAACttccaggacctacagtacagtataatcctaTCATCCTCAATGAAGCGCTCTTGAACACATACTTATGTAGTGTGCAGGCGAGTTAAGATATCTAATGATTAACATAGAGATATTACCTCTCATTAATTCAATTCACCTAAAGGTAAACTCATGGATTTTTGCACTATACACCTGCATTTACAAATGCTTAGTATTTTGGGCATTTGCAGCTCTCTGAATAACATGATAGAACTGATTCTGAATCAGGGTTTTAAGTATTATAAACATGCAACAGATCAAATGGCCAGTCTGTTTTCCAGTAGAGTGTAGTAGGTCATTGACTGTAGCAGTAGCATGTAGATCAAACCAATACAGTTCAAGGTGATGGTAACACGTCACTCAAACGCATCACACTTTAAATTCACTGCCTTTGTTTTTGTGGAATTCACTTCAAGTTTTAATCATATTTTTTGTGCTTTACACAGTATattgttcctcttcctctctcataaTACTTCAATAAATACCACTGTTTCCATTAGTCAGCTTAGTGTTCTTTTATGTCTCGATATCAGTTATATTTACTCTGCTTGTAATCTTAccatactgtattttattgatAAGTACTTATTTTCAGTGATTTTTCTGTGAAACTTGGTGAGTTGCCATTTCCACCCTAGTATTCCTATCTCTCCTGTTCAGACTGGTTTGGCACCGAACACCCATCCTTATTACAATCCTCAGTCTGGCATAGCAACACAACCCTAATGACAAATCTAACATCCTAAACCATATGGCCAAATACAACTCCATATGCATGTTATCTGGGTCGTCGGTATCATCTTTAGTATtctcagttttttgtttttttatttgcaCAAATGATTCCACCTTTGTGACCATGCCTTTGTCTTCACTGTCAGACCATTGGTGTGTGATGATGCCTTTGCTCATTTATTTAATGATAATTGCCTTGTTCTTTTCATATAGTTTTTTATAAATTCCTCTTATATTTGTGTGTTTACGGTTCCAAACATGCCAACATGAATTACCTGTACATGTCAttctttttcttctttcattTTACTGTACTCAAAATAAAACTGCTAATAGCCTAAATGCTGTGTGGTTTTATTGTGCCTGTTTGGCATTTGCGATAATTAAAGGTCTTTACCCCTGGAA
>XM_036968958.1
GGTCTAAGCAATGCTATAATCAGATGATGTGATATAAAGTTTTGGTGCATTGCAGAGTTTCAACAGTTAAGAAGATGTATGAAAGAACAATAGCAAAGTGCCTGGTACGATTATTACTCATCTACCGGGGCGGGTGTTCCGCTTTTTAGTCCACTGAGCAGTCCTTGTGCAAGGGGGCATTTACACTTTTACAGCTTTTGATAGATTCCCGCTCGCTCACGACAAAGAAAAATTCAGAGGCTGTAACCGGAAGTACAGTTTAGGAGGAATAGTTAGCTGGCTGATTAGCCAGACAGAAATCTCACATTCCTTTGGAAATAGACAGGGAAAGGGTGATGGCAACATCCATTTAGGGTACATATAGATCTGCCGTTGAAGAATAAATAGAAAGGGGCCGGTTGAGAACGATAAACCGTGTCATCGAAGTAGAGAGGCGAGGAAGTAACGttagccctctacaacctctggcTAGCTACCAACTGTAGGGAGGCTGCTAGCCAGCAAAAATATAGaCAGTAAAACGACAACATGGCTGAATCCAGCGGTAGTAAACCCTTCATGGTGACTTCCTCCATCAACCTCAAAGTCACCACCCCCTCCTTCTACAACCAGCCAAAGAAGTTTGCCTCGGTCAACCCGCCGCGCCCCAAAAGCCAGTCCGACCCGTGGCCTCCCCCGGGCTCAACTCCTCCCGCaggtccctctcctccccccagcctGGTCTCAACACGCGGTGTCGGCACAGCTGTCATTGGTCGAGTTGGAGTGATGCCTCCACCCCCACCATCGCTCTGCGAAGACTTCCcgccccctcctcctccgttgGACGATGAGCTGCCAGCCCCTCCCCCCAACTGTGCAACCACACCCCCAGCCTCTGATGCCCCTCCCCCtgccttccctccccctcccgcGGTGGATGACCTGCCCCTCCCCCCCGCCCCGCTTGAGGAGAATGCCTGTCTCCCCCGTTCcccgtctccccctcctccaccaccccctccccctctcccagtctctggtcCCAGCAGTGTCCCCAGTGCTGGGGAGAACTTTCAGCGTCTGGCAAAACAGACTAGTTTTGACAAACAGCTGGATTCTCTGACTGACCTGCTCTCTGAGATGGAGACCAGAGGACCCTTCAACCCCAAGTTGCCCAGTCAGTactcagctcctcctcctcctgcccccaAGCCTGCAGGTCCTCCCCCCACTGCTCCCAAGCccaacctctccttcctcccccctccagaGATGGGAGACAAGCCCCCTCCCGCTCCCTGGGCCGAGGAGCTCAAACTCCGGACGACACACAGACAAGCCAATAACCCTATATCCGCCCCAGCTCCTGCTCCTGCCCCACAGCCATTTGCTAAAGCCCCAGTCGTGGCTCCTAAGGCTTTTGGGGACATGAAAACGGGGACGTTCGTGTCTCCTGTGGGGCTGAAGAACCAGAACCACGCCCCGGCTCCATTTGGTGTTGCTCCTAAACCTTCCCCTGCAGCcagctccttccctcctcctcctgccgcTCCTCCCGCCCCACCAGCCAACAAAGTGGCTCCCCCAGCCTTCAATCACTCAAAGCCCTCTTCCATTGACTCTCAGATGACTGTGAGCCCACCCCCTCCTGCTCCCGTGCACCCTCCTCAGCCCAAAGCGATGACATCACCACCTTCTTCTTTCAGCCAGCCAATGAAATCTCCCCCTTCATCAAAGCCCTCGCCTCCTGGGCCTGTCTCTGTCCCAGGTGGAGGTGTTCCTCTCTCcatgagggaggtggaggagctggagagaATGACCAATGCATTCATCAAAGACATGGACACACACGCTCCCGTCATCACCTCAGcacctacagAGGTATGTGGTAAGTGTGGTGAGGCTCTGTCTCGTTCCCAGCCTGCAGTGAGAGCCATGAACAAACTCTTCCACTCTGACTGTTTCTGCTGTATGAGCTGCCATCGCCCCCTGCAGGGCATGCAGTTCTACGACAAGGACGGGACGCCACAGTGTGACGACTGCTACACTagTTCTCTGGCGGTGTGTTCTCGGTGTGGGGAGCGTATTACAGACCGTGTGTTGAAGGCGGTGGGCCAGTGTTTCCATGCCCATTGTTTCCGCTGCTGCACCTGCGCCTGCAGCCTGGAGGGGGCGCCCTTCATCACCGACGAcgacaacaacccatactgtgTCCCAGACTACCACAGGCGTTTCTCTCCCCTGTGTGTGAGCTGTAATGAGCCCATAGTTCCTGACGCCGGCAGTCAAGAGACCGTCAGAGTCGTGGCCCTCGACAAGAACTTCCACCTCAAGTGCTACCGCTGTGAGGATTGTTCCCGCCCCCTCTCCATAGAGGCGGACGCAGACGGCTGCTACCCATTGGACGGCAGGATCCTGTGCATGAAGTGCCACACCCAGCGGGCCAAGGCTATGCAGTGATTGGTGGACACATCTGTTATTCAAGTCAAACTTTGAACCAAATCCAAGACGGGATCCATTCAGCTTCCACCATTCTGTATTTGCAACAGGGCTTTacttgtgagtgagtgagtgagtgagtatgttTGCATGCAGATGTCgttatgtctctctcctctttctgcttATTCCCCCTCTCAGTCCAGAGGTAATGTACTGCACTGAGAgactccattcctcctccccttctccccttgtGTTAATGCCAGTGTTATCAAGGCCATTTTTTGTTTATGCTTAAATTCCCAGCATGACTTGCACAAGTATAGCTTAGTCATGGGCTGTCCCAACAGTCAAAGatggtttcctctcctcttctctctccactgaTAGGAAAACATGTTGAGAAGGTTTCAGCCTTAAAACTTTGATTTGTCTTTCACTTTTCAGTGGTAAGGAAGGAAAAGAGTGGAAGTATTTCAGAGTGAGACATAGTAAGATGAAGTTGACCCTaaatgctgatcttgggtcagtctTGCAATCCCCCCCTTACTGATTATGGTTAGATCTTAGATCTGTGCCTACTGGCAACTTTTCCCAGAAGTTTAGTGTAACCCCCTGACCCCAGTGCATGAGGAGTTGAACAAAAGTTTAAGGTGGACTAATTCATGTTCCCCTGCACCTCCCATAGGGCTGAGCTCTGGTGGGCTGGTGGCACATGAAGCACTTTGGAGTGCCTGCAAACATACAAGTTACTTAACTGCCTTTAGAGAGTGCTTTCTAGAGAACTACATATCCCACCAGACACAATGTAGCAGAGCAGTGTGTTGTAGGAAATGTAGTTCCTCTTGGGCTAAAAACTgagtgcaaaaaaatatatatatatatatgtgaatgTCGCTCTcgtttgtttttgttgtgtgtgtttgttgctttATAGGCATGCATAGCTACAGATCACTGTCAGTTACTCTCACCAGTTTGTCAAGCACAGAATGAGGGTACAATACGATCAAAATGACCATTTATTTCTTTGTCAAAAGAATAGAAGATTTAAGATCATGATTAGAGACACTACCTAGAACAAAGGTCAAAAGTTAGCCCAGCACAGATTCCATTCCTATGATCTCCTCATGTTAAATAGAGTGCTGTAGTTTAAAGAGGACCACATGGCTTAGAACAGAACCTACGCTACAGGCAGAAgttgctcttaaccgctaggatcagattaccctacCCCATCCCTAATCTTAATTTAAAGGGGATGGAGGGAAAACGTCGGATCCTGCATCAGTAGTTAGGGGCAACttccaggacctacagtacagtataatcctaTCATCCTCAATGAAGCGCTCTTGAACACATACTTATGTAGTGTGCAGGCGAGTTAAGATATCTAATGATTAACATAGAGATATTACCTCTCATTAATTCAATTCACCTAAAGGTAAACTCATGGATTTTTGCACTATACACCTGCATTTACAAATGCTTAGTATTTTGGGCATTTGCAGCTCTCTGAATAACATGATAGAACTGATTCTGAATCAGGGTTTTAAGTATTATAAACATGCAACAGATCAAATGGCCAGTCTGTTTTCCAGTAGAGTGTAGTAGGTCATTGACTGTAGCAGTAGCATGTAGATCAAACCAATACAGTTCAAGGTGATGGTAACACGTCACTCAAACGCATCACACTTTAAATTCACTGCCTTTGTTTTTGTGGAATTCACTTCAAGTTTTAATCATATTTTTTGTGCTTTACACAGTATattgttcctcttcctctctcataaTACTTCAATAAATACCACTGTTTCCATTAGTCAGCTTAGTGTTCTTTTATGTCTCGATATCAGTTATATTTACTCTGCTTGTAATCTTAccatactgtattttattgatAAGTACTTATTTTCAGTGATTTTTCTGTGAAACTTGGTGAGTTGCCATTTCCACCCTAGTATTCCTATCTCTCCTGTTCAGACTGGTTTGGCACCGAACACCCATCCTTATTACAATCCTCAGTCTGGCATAGCAACACAACCCTAATGACAAATCTAACATCCTAAACCATATGGCCAAATACAACTCCATATGCATGTTATCTGGGTCGTCGGTATCATCTTTAGTATtctcagttttttgtttttttatttgcaCAAATGATTCCACCTTTGTGACCATGCCTTTGTCTTCACTGTCAGACCATTGGTGTGTGATGATGCCTTTGCTCATTTATTTAATGATAATTGCCTTGTTCTTTTCATATAGTTTTTTATAAATTCCTCTTATATTTGTGTGTTTACGGTTCCAAACATGCCAACATGAATTACCTGTACATGTCAttctttttcttctttcattTTACTGTACTCAAAATAAAACTGCTAATAGCCTAAATGCTGTGTGGTTTTATTGTGCCTGTTTGGCATTTGCGATAATTAAAGGTCTTTACCCCTGGAA
>TU256224
CGGAAGTACAGTTTAGGAGGAATAGTTAGCTGGCTGATTAGCCAGACAGAAATCTCACATTCCTTTGGAAATAGACAGGGAAAGGGTGATGGCAACATCCATTTAGGGTACATATAGATCTGCCGTTGAAGAATAAATAGAAAGGGGCCGGTTGAGAACGATAAACCGTGTCATCGAAGTAGAGAGGCGAGGAAGTAACGttagccctctacaacctctggcTAGCTACCAACTGTAGGGAGGCTGCTAGCCAGCAAAAATATAGaCAGTAAAACGACAACATGGCTGAATCCAGCGGTAGTAAACCCTTCATGGTGACTTCCTCCATCAACCTCAAAGTCACCACCCCCTCCTTCTACAACCAGCCAAAGAAGTTTGCCTCGGTCAACCCGCCGCGCCCCAAAAGCCAGTCCGACCCGTGGCCTCCCCCGGGCTCAACTCCTCCCGCaggtccctctcctccccccagcctGGTCTCAACACGCGGTGTCGGCACAGCTGTCATTGGTCGAGTTGGAGTGATGCCTCCACCCCCACCATCGCTCTGCGAAGACTTCCcgccccctcctcctccgttgGACGATGAGCTGCCAGCCCCTCCCCCCAACTGTGCAACCACACCCCCAGCCTCTGA

Function

symbol description
zyx Predicted to enable metal ion binding activity. Predicted to be involved in integrin-mediated signaling pathway and transforming growth factor beta receptor signaling pathway. Predicted to be active in cytoplasm; focal adhesion; and stress fiber. Orthologous to human ZYX (zyxin).

NR:

description
zyxin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968965.1 False 4546 mRNA 0.48 10 11580308 11600483
XM_036968958.1 False 4890 mRNA 0.48 10 11580535 11600483
TU256224 True 634 TUCP 0.44 3 11580782 11590344

Neighbor

gene id symbol gene type direction distance location
LOC118944486 LOC106592935 coding upstream 78983 11496306 ~ 11501325 (+)
LOC118944450 LOC106605830 coding upstream 90476 11479797 ~ 11489832 (+)
LOC110509281 LOC106576719 coding upstream 103532 11468774 ~ 11476776 (+)
LOC110509154 LOC106576792 coding upstream 159501 11411388 ~ 11420807 (+)
m6pr mprd coding upstream 173730 11399020 ~ 11406578 (+)
kel LOC106575861 coding downstream 1900 11602383 ~ 11608965 (+)
LOC110509324 LOC106575899 coding downstream 10096 11610579 ~ 11613064 (+)
LOC110509359 LOC106576663 coding downstream 23482 11623965 ~ 11630699 (+)
LOC110509378 LOC106605735 coding downstream 30360 11630843 ~ 11635397 (+)
ncapd2 ncapd2 coding downstream 35194 11635677 ~ 11654262 (+)
G224134 NA non-coding upstream 3850 11576151 ~ 11576458 (+)
G224126 NA non-coding upstream 18327 11561759 ~ 11561981 (+)
G224105 NA non-coding upstream 27718 11552284 ~ 11552590 (+)
G224099 NA non-coding upstream 38822 11540868 ~ 11541486 (+)
G224097 NA non-coding upstream 48576 11530489 ~ 11531732 (+)
G224116 LOC106575912 non-coding downstream 13083 11613566 ~ 11615975 (+)
G224138 NA non-coding downstream 18204 11618687 ~ 11619112 (+)
G224163 NA non-coding downstream 93340 11693823 ~ 11694023 (+)
G224165 NA non-coding downstream 96011 11696494 ~ 11696725 (+)
G224167 NA non-coding downstream 100569 11701052 ~ 11701355 (+)
G224052 gstk1 other upstream 143848 11433120 ~ 11436460 (+)
G224035 NA other upstream 188346 11391333 ~ 11391962 (+)
LOC110509074 LOC106576860 other upstream 405945 11166919 ~ 11174363 (+)
G223748 NA other upstream 536616 11041848 ~ 11043692 (+)
mfap5 LOC106575133 other upstream 539048 11036238 ~ 11041281 (+)
mrpl51 LOC100194563 other downstream 188046 11788492 ~ 11790660 (+)
LOC110537447 LOC106577011 other downstream 414025 12005269 ~ 12053650 (+)
G224297 NA other downstream 420482 12020965 ~ 12022444 (+)
LOC110509826 LOC106576393 other downstream 658838 12259134 ~ 12357204 (+)
LOC110503596 LOC106576258 other downstream 768508 12368841 ~ 12430981 (+)

Expression


Co-expression Network