LOC110509335


Basic Information

Item Value
gene id LOC110509335
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11613213 ~ 11614838 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021590257.2
TATTGAATAACTAATGACCCCATCCCTATCTCCATCTGTATCCAGCGACCCCAGTTCGCCTGTTCAAGTACCAGGCAGAGGCTACATCTGCACCCAAAACCAACGATGCAAGGCGTGTGGCTACCCGGGTCTCCCAGCTCATCCTTCGGGTAGTCTCCCAGTGCAAGCACCGGGGTGGCATCTCCATGGTGGACCTCAAGCATGCCCTGGCTGCTGGTGGCTATGATGTTACCAAGAACAATACCCGTGTGAACTTAGCTGTGAAAGGCCTGGTGAGGAAGGAGACACTGGTGCAGACTACTGGAGTTGGTGCATCTGGGTCATTTAAACTCAACAAGAAACTGACGTATGAGAAGAGAGTTAAGACAAGAGCCATGAGAAACCTTGCAGCAGCTGAGAGGGCCAAGCAGAAAAAAGGAATTTTGAAGCCAGCAGCAGAGAAAGGAAAGGCCTTGAAACCAACAGGAAAAGGCCAGAAACCAGGAGCAAAAACAACTAAACCAGCAGGAAAAGCTCTGAAACCAGGAGCAAAAACAACTAAACCAGCAGGAAAAGCTCTGAAACCAGGAGCAAAAACAACTAAACCAGCAGGAAAAACAGCTCAACCAGCAGACAAGAACAAAACAGTTGTAGGAAAAGGTCAAAGGGAAATAGGAGATAGACCAAAACAAGTAGGCAAAAGCCACAAACCAGCAGGACAAGCATCAAAATCACCAGCCAAGGTCCAAAAAACAGGCTACAAAGCCCCTAAATCTGCAGGAAAGTCCTTGAAAGCAGCCAATCAGAAAACCCGTAAAATGGTTGTAAGCCGCAATACAAAGCCACGGATATAGTGACCTGGGCTTGCTAAAAGACGTGCTTCCTTGTGGAAATGGACTGAGTATGGACTAGAAGAATAATATGTCCGTAGTAGATTTGCCAAATTACCGTAGCCTTACGTATACGACTGTTATATTTTGTCAATGTAATAAAAATCAATACAATGTTCCTCACAAAttacatgtacactaccgttcaaaggtttggggtcacatagaaatgtcctttaaatcagaacagttttcagctgtactaacaattaccaaatggttttctaatgatcaattagccctttaaaacaaacttggattatctaacacaatgtgccattggaacacaggaggttgctgataatgggcctctgtacacccatggagatattccataaaatatctgccgtttccagctacaatagtctacactgtatttctgatcaatttgatgttattttatttaatggacaaaacatttgcttttctttcaaaaacaaggccaTTTAAGTGACCCTAAagttttgaacagtagtgtatattgaGTGATTATTTGACCAGTATTACATGAAAACATGATTTTTGTCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021590257.2 True 1398 mRNA 0.43 2 11613213 11614838

Neighbor

gene id symbol gene type direction distance location
fam131bb fam131b coding downstream 64472 11503867 ~ 11548741 (-)
LOC110509245 LOC106576972 coding downstream 158847 11449258 ~ 11454366 (-)
LOC110509171 LOC100196661 coding downstream 176585 11433118 ~ 11436628 (-)
styk1b LOC106576787 coding downstream 180224 11424793 ~ 11432989 (-)
LOC110510606 LOC106605835 coding downstream 226495 11370632 ~ 11386718 (-)
LOC110509576 LOC106576947 coding upstream 112446 11727284 ~ 11741584 (-)
LOC110509520 lag-3 coding upstream 161217 11776055 ~ 11779268 (-)
LOC110509592 LOC100136300 coding upstream 193275 11808113 ~ 11811663 (-)
c1r c1r/c1s coding upstream 204775 11819613 ~ 11825101 (-)
LOC110509614 ret1 coding upstream 243880 11858718 ~ 11862407 (-)
G224795 zyx non-coding downstream 24245 11580307 ~ 11588968 (-)
G224788 NA non-coding downstream 37688 11575163 ~ 11575525 (-)
G224783 NA non-coding downstream 43453 11569535 ~ 11569760 (-)
G224779 NA non-coding downstream 46699 11565287 ~ 11566514 (-)
G224776 NA non-coding downstream 50877 11562048 ~ 11562336 (-)
G224822 NA non-coding upstream 1614 11616452 ~ 11617005 (-)
G224821 NA non-coding upstream 2413 11617251 ~ 11618294 (-)
G224800 NA non-coding upstream 31672 11646510 ~ 11659065 (-)
G224806 NA non-coding upstream 38425 11653263 ~ 11654318 (-)
G224797 LOC100135813 non-coding upstream 40041 11654879 ~ 11693327 (-)
G223969 LOC106605840 other downstream 334585 11275917 ~ 11278628 (-)
G223942 LOC106576860 other downstream 438846 11172120 ~ 11174367 (-)
znf628 LOC106605829 other downstream 539463 11068525 ~ 11079570 (-)
LOC110508724 prpf31 other downstream 1590010 10019313 ~ 10024005 (-)
G223070 NA other downstream 1598321 10012961 ~ 10014892 (-)
G224869 NA other upstream 138013 11752851 ~ 11753680 (-)
G224873 NA other upstream 181052 11795890 ~ 11796309 (-)
G224954 LOC106576536 other upstream 400088 12014926 ~ 12016101 (-)

Expression


Co-expression Network