Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964381 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 11640038 ~ 11640331 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051431.1 | True | 294 | mRNA | 0.51 | 1 | 11640038 | 11640331 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964379 | NA | coding | upstream | 618 | 11639116 ~ 11639420 (+) |
| LOC118964380 | NA | coding | upstream | 2774 | 11636966 ~ 11637264 (+) |
| LOC110509378 | LOC106605735 | coding | upstream | 4641 | 11630843 ~ 11635397 (+) |
| LOC110509359 | LOC106576663 | coding | upstream | 9339 | 11623965 ~ 11630699 (+) |
| LOC110509324 | LOC106575899 | coding | upstream | 26974 | 11610579 ~ 11613064 (+) |
| LOC118964382 | NA | coding | downstream | 3125 | 11643456 ~ 11643760 (+) |
| wu:fj39g12 | cnp-1 | coding | downstream | 18482 | 11658813 ~ 11661113 (+) |
| gapdh | LOC100135813 | coding | downstream | 28166 | 11668497 ~ 11673146 (+) |
| LOC110509388 | LOC106576962 | coding | downstream | 39910 | 11680241 ~ 11682756 (+) |
| iffo1b | LOC106576644 | coding | downstream | 42735 | 11683066 ~ 11708251 (+) |
| G224138 | NA | non-coding | upstream | 20926 | 11618687 ~ 11619112 (+) |
| G224116 | LOC106575912 | non-coding | upstream | 24063 | 11613566 ~ 11615975 (+) |
| G224134 | NA | non-coding | upstream | 63580 | 11576151 ~ 11576458 (+) |
| G224126 | NA | non-coding | upstream | 78057 | 11561759 ~ 11561981 (+) |
| G224105 | NA | non-coding | upstream | 87448 | 11552284 ~ 11552590 (+) |
| G224163 | NA | non-coding | downstream | 53492 | 11693823 ~ 11694023 (+) |
| G224165 | NA | non-coding | downstream | 56163 | 11696494 ~ 11696725 (+) |
| G224167 | NA | non-coding | downstream | 60721 | 11701052 ~ 11701355 (+) |
| G224177 | NA | non-coding | downstream | 111383 | 11751714 ~ 11751899 (+) |
| G224182 | NA | non-coding | downstream | 121617 | 11761948 ~ 11765453 (+) |
| LOC110520911 | zyx | other | upstream | 49694 | 11580308 ~ 11600483 (+) |
| G224052 | gstk1 | other | upstream | 203578 | 11433120 ~ 11436460 (+) |
| G224035 | NA | other | upstream | 248076 | 11391333 ~ 11391962 (+) |
| LOC110509074 | LOC106576860 | other | upstream | 465675 | 11166919 ~ 11174363 (+) |
| G223748 | NA | other | upstream | 596346 | 11041848 ~ 11043692 (+) |
| mrpl51 | LOC100194563 | other | downstream | 148198 | 11788492 ~ 11790660 (+) |
| LOC110537447 | LOC106577011 | other | downstream | 374177 | 12005269 ~ 12053650 (+) |
| G224297 | NA | other | downstream | 380634 | 12020965 ~ 12022444 (+) |
| LOC110509826 | LOC106576393 | other | downstream | 618990 | 12259134 ~ 12357204 (+) |
| LOC110503596 | LOC106576258 | other | downstream | 728660 | 12368841 ~ 12430981 (+) |
