Gene
RNA
| Item | Value |
|---|---|
| gene id | wu:fj39g12 |
| gene name | cnp-1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 11658813 ~ 11661113 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| C-type natriuretic peptide 1 precursor |
| id | name | namespace |
|---|---|---|
| GO:0005576 | extracellular region | cellular_component |
| GO:0005179 | hormone activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036969034.1 | True | 1357 | mRNA | 0.46 | 3 | 11658813 | 11661113 |
11,657,000
11,658,000
11,659,000
11,660,000
11,661,000
11,662,000
11,663,000
11,664,000
11,665,000
NC_048567.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ncapd2 | ncapd2 | coding | upstream | 4551 | 11635677 ~ 11654262 (+) |
| LOC118964382 | NA | coding | upstream | 15053 | 11643456 ~ 11643760 (+) |
| LOC118964381 | NA | coding | upstream | 18482 | 11640038 ~ 11640331 (+) |
| LOC118964379 | NA | coding | upstream | 19393 | 11639116 ~ 11639420 (+) |
| LOC118964380 | NA | coding | upstream | 21549 | 11636966 ~ 11637264 (+) |
| gapdh | LOC100135813 | coding | downstream | 7384 | 11668497 ~ 11673146 (+) |
| LOC110509388 | LOC106576962 | coding | downstream | 19128 | 11680241 ~ 11682756 (+) |
| iffo1b | LOC106576644 | coding | downstream | 21953 | 11683066 ~ 11708251 (+) |
| LOC110509555 | LOC106575195 | coding | downstream | 47736 | 11708849 ~ 11727254 (+) |
| LOC110509537 | LOC106575188 | coding | downstream | 76837 | 11737950 ~ 11747921 (+) |
| G224138 | NA | non-coding | upstream | 39701 | 11618687 ~ 11619112 (+) |
| G224116 | LOC106575912 | non-coding | upstream | 42838 | 11613566 ~ 11615975 (+) |
| G224134 | NA | non-coding | upstream | 82355 | 11576151 ~ 11576458 (+) |
| G224126 | NA | non-coding | upstream | 96832 | 11561759 ~ 11561981 (+) |
| G224105 | NA | non-coding | upstream | 106223 | 11552284 ~ 11552590 (+) |
| G224163 | NA | non-coding | downstream | 32710 | 11693823 ~ 11694023 (+) |
| G224165 | NA | non-coding | downstream | 35381 | 11696494 ~ 11696725 (+) |
| G224167 | NA | non-coding | downstream | 39939 | 11701052 ~ 11701355 (+) |
| G224177 | NA | non-coding | downstream | 90601 | 11751714 ~ 11751899 (+) |
| G224182 | NA | non-coding | downstream | 100835 | 11761948 ~ 11765453 (+) |
| LOC110520911 | zyx | other | upstream | 68469 | 11580308 ~ 11600483 (+) |
| G224052 | gstk1 | other | upstream | 222353 | 11433120 ~ 11436460 (+) |
| G224035 | NA | other | upstream | 266851 | 11391333 ~ 11391962 (+) |
| LOC110509074 | LOC106576860 | other | upstream | 484450 | 11166919 ~ 11174363 (+) |
| G223748 | NA | other | upstream | 615121 | 11041848 ~ 11043692 (+) |
| mrpl51 | LOC100194563 | other | downstream | 127416 | 11788492 ~ 11790660 (+) |
| LOC110537447 | LOC106577011 | other | downstream | 353395 | 12005269 ~ 12053650 (+) |
| G224297 | NA | other | downstream | 359852 | 12020965 ~ 12022444 (+) |
| LOC110509826 | LOC106576393 | other | downstream | 598208 | 12259134 ~ 12357204 (+) |
| LOC110503596 | LOC106576258 | other | downstream | 707878 | 12368841 ~ 12430981 (+) |
