mrpl51 (LOC100194563)


Basic Information

Item Value
gene id mrpl51
gene name LOC100194563
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11788492 ~ 11790660 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021590639.2
TGTTTAGGAGTTTTACGGTAAATGCGCGTTGCATCGTGGGAATAATAGTAAAATGGAGGTGCCCGTATGGCATGCATGACTTTATACATGTCGACGCTTTAAAACGTGAATTTCGATTTGTCTATAGTTAATGAACAACTATTAATGCGTGCCTTTGTTTTGTATTAGATTTTTATTATCATATTAGCTTGACGACTACAAGGTCATAAAGACGTGCAACACTTCAGGTGAGCCATGTCTCTGTTGAGAGGGTGGCTGAAGGCTGGGGTGTCTCTTTGCCACTCCACACTACAAACAACCAGACAGATACGCACTGGTGTGTGCTGTCCAGTCCGTATGAATGCCATTCCTGAGCTGAAGAAGGTGGACAGGTGGACTGAGAAGAGGAGCATGTTTGGGGTTTATGACAACATAGGAATTTTAGGTGACTTCAAAGCCCACCCTAAGGATCTGATCGTCGGGCCGGTCTGGGTGAAGGGTTTCCGTGGCAATGAGCTGCAGCGTCTGACGAGGAAGAAGAGGATGGTAGGAGACAGGATGATGACGCAGGACAAACATGATATGGAGAAGAGGATCCGCTTCCTCTATCGACACTTCAACCGCTTTGGGAAACATCGCTGATCTGATCTGGGACTGAGCGATCTGGCTAACAATGCTAAATGACTACTGTACTAACAACCTGCCCACTGGACCACATTCAGACTCTAAAGAGAGAAATGTGAGCTACTCAGTTATGCCACTTAGATTTATATCAGCCCCTTATTTTCACCATTTGGTAAGAGGAAGCTGATTGTACATTTTCTGTTAAGTTGACAGCTGGAAAATGTTGGATTCATTTAGTATTGTTAGCACTAAATCAACACGCACATctgtaaaatacatgttttgaaCCACACAAAAATGTGATGCTCTATGGTCGGTTAATGTTATCACATTGGGGACTAATGTAAGTCATGTTGTGGGTATACCATGTGTTGTGTAAGATAATAAACAGAAGCTCATTACATTTGAGTTGTAAGCCTA
>XM_021590647.2
GTTTTACGGTAAATGCGCGTTGCATCGTGGGAATAATAGTAAAATGGAGGTGCCCGTATGGCATGCATGACTTTATACATGTCGACGCTTTAAAACGTGAATTTCGATTTGTCTATAGTTAATGAACAACTATTAATGCGTGCCTTTGTTTTGTATTAGATTTTTATTATCATATTAGCTTGACGACTACAAGGTCATAAAGACGTGCAACACTTCAGGTAAACATGGTCTTGCCTGTTTGCTACGCTAGCTGGCTGAGCTAGCTTAGCTAGGTCAACTTGTAGGCAAAGAggaacatatttttattttagcTACAGAAGCTACCTCTCTTGTTTTTGCAAACATTGTACCTAATATTACACCCGTAGCTAGGTGAGCCATGTCTCTGTTGAGAGGGTGGCTGAAGGCTGGGGTGTCTCTTTGCCACTCCACACTACAAACAACCAGACAGATACGCACTGGTGTGTGCTGTCCAGTCCGTATGAATGCCATTCCTGAGCTGAAGAAGGTGGACAGGTGGACTGAGAAGAGGAGCATGTTTGGGGTTTATGACAACATAGGAATTTTAGGTGACTTCAAAGCCCACCCTAAGGATCTGATCGTCGGGCCGGTCTGGGTGAAGGGTTTCCGTGGCAATGAGCTGCAGCGTCTGACGAGGAAGAAGAGGATGGTAGGAGACAGGATGATGACGCAGGACAAACATGATATGGAGAAGAGGATCCGCTTCCTCTATCGACACTTCAACCGCTTTGGGAAACATCGCTGATCTGATCTGGGACTGAGCGATCTGGCTAACAATGCTAAATGACTACTGTACTAACAACCTGCCCACTGGACCACATTCAGACTCTAAAGAGAGAAATGTGAGCTACTCAGTTATGCCACTTAGATTTATATCAGCCCCTTATTTTCACCATTTGGTAAGAGGAAGCTGATTGTACATTTTCTGTTAAGTTGACAGCTGGAAAATGTTGGATTCATTTAGTATTGTTAGCACTAAATCAACACGCACATctgtaaaatacatgttttgaaCCACACAAAAATGTGATGCTCTATGGTCGGTTAATGTTATCACATTGGGGACTAATGTAAGTCATGTTGTGGGTATACCATGTGTTGTGTAAGATAATAAACAGAAGCTCATTACATTTGAGTTGTAAGCCTA
>TU256282
GGGAATAATAGTAAAATGGAGGTGCCCGTATGGCATGCATGACTTTATACATGTCGACGCTTTAAAACGTGAATTTCGATTTGTCTATAGTTAATGAACAACTATTAATGCGTGCCTTTGTTTTGTATTAGATTTTTATTATCATATTAGCTTGACGACTACAAGGTCATAAAGACGTGCAACACTTCAGGTAAACATGGTCTTGCCTGTTTGCTACGCTAGCTGGCTGAGCTAGCTTAGCTAGGTCAACTTGTAGGCAAAGAggaacatatttttattttagcTACAGAAGCTACCTCTCTTGTTTTTGCAAACATTGTACCTAATATTACACCCGTAGCTAGGTGAGCCATGTCTCTGTTGAGAGGGTGGCTGAAGGCTGGGGTGTCTCTTTGCCACTCCACACTACAAACAACCAGACAGATACGCACTGGTGTGTGCTGTCCAGTCCGTATGAATGCCATTCCTGAGCTGAAGAAGGTGGACAGGTGGACTGAGAAGAGGAGCATGTTTGGGGTTTATGACAACATAGGAATTTTAGGTGACTTCAAAGCCCACCCTAAGGATCTGATCGTCGGGCCGGTCTGGGTGAAGGGTTTCCGTGGCAATGAGCTGCAGCGTCTGACGAGGAAGAAGAGGATGGTAGGAGACAGGATGATGACGCAGGACAAACATGATATGGAGAAGAGGATCCGCTTCCTCTATCGACACTTCAACCGCTTTGGGAAACATCGCTGATCTGATCTGGGACTGAGCGATCTGGCTAACAATGCTAAATGACTACTGTACTAACAACCTGCCCACTGGACCACATTCAGACTCTAAAGAGAGAAATGTGAGCTACTCAGTTATGCCACTTAGATTTATATCAGCCCCTTATTTTCACCATTTGGTAAGAGGAAGCTGATTGTACATTTTCTGTTAAGTTGACAGCTGGAAAATGTTGGATTCATTTAGTATTGTTAGCACTAAATCAACACGCACATctgtaaaatacatgttttgaaCCACACAAAAATGTGATGCTCTATGGTCGGTTAATGTTATCACATTGGGGACTAATGTAAGTCATGTTGTGGGTATACCATGTGTTGTGTAAGATAATAAACAGAAGCTCAT

Function

NR:

description
39S ribosomal protein L51, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021590639.2 False 1023 mRNA 0.43 4 11788492 11790660
XM_021590647.2 False 1168 mRNA 0.43 4 11788501 11790660
TU256282 True 1119 TUCP 0.43 4 11788529 11790639

Neighbor

gene id symbol gene type direction distance location
LOC118936286 LOC106575183 coding upstream 12459 11754136 ~ 11776033 (+)
LOC110509537 LOC106575188 coding upstream 40571 11737950 ~ 11747921 (+)
LOC110509555 LOC106575195 coding upstream 61238 11708849 ~ 11727254 (+)
iffo1b LOC106576644 coding upstream 80241 11683066 ~ 11708251 (+)
LOC110509388 LOC106576962 coding upstream 105736 11680241 ~ 11682756 (+)
LOC110509655 NA coding downstream 570 11791230 ~ 11808120 (+)
tnfr tnfr coding downstream 47223 11837883 ~ 11858967 (+)
LOC110509543 LOC106576564 coding downstream 167112 11957772 ~ 11966128 (+)
LOC110509582 mlf2 coding downstream 189647 11927476 ~ 11985113 (+)
LOC110509600 LOC106576545 coding downstream 196593 11987253 ~ 12004723 (+)
G224184 LOC106605850 non-coding upstream 10288 11777789 ~ 11778204 (+)
G224183 LOC106605731 non-coding upstream 10991 11776750 ~ 11777501 (+)
G224182 NA non-coding upstream 23039 11761948 ~ 11765453 (+)
G224177 NA non-coding upstream 36593 11751714 ~ 11751899 (+)
G224167 NA non-coding upstream 87137 11701052 ~ 11701355 (+)
G224197 NA non-coding downstream 18088 11808748 ~ 11809478 (+)
G224225 NA non-coding downstream 118371 11909031 ~ 11909554 (+)
G224267 NA non-coding downstream 168632 11959292 ~ 11959895 (+)
LOC110520911 zyx other upstream 198148 11580308 ~ 11600483 (+)
G224052 gstk1 other upstream 352032 11433120 ~ 11436460 (+)
G224035 NA other upstream 396530 11391333 ~ 11391962 (+)
LOC110509074 LOC106576860 other upstream 614129 11166919 ~ 11174363 (+)
G223748 NA other upstream 744800 11041848 ~ 11043692 (+)
LOC110537447 LOC106577011 other downstream 223848 12005269 ~ 12053650 (+)
G224297 NA other downstream 230305 12020965 ~ 12022444 (+)
LOC110509826 LOC106576393 other downstream 468661 12259134 ~ 12357204 (+)
LOC110503596 LOC106576258 other downstream 578331 12368841 ~ 12430981 (+)
grik5 grik5 other downstream 869960 12497538 ~ 12664742 (+)

Expression


Co-expression Network