LOC110509600 (LOC106576545)


Basic Information

Item Value
gene id LOC110509600
gene name LOC106576545
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11987253 ~ 12004723 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036969197.1
CCTCCCTgtgcccctctctcactctccctctctctcatttgctCACATTCTCTCACTTTCCCTACCAGGCTTCACACACACTGCAGGATGTCGATAGTGATCATTGTTGCCAGGGAGATCCTGGACTCCAGGGGGAACCCCACAGTGGAAGTGGACCTGCACACAGACAAAGGTGTCTTCAGGGCAGCTGTGCCTAGCGGAGCGTCTACTGGCATCTATGAAGCCCTGGAGCTGAGAGACGGAGACAAAAGCCGCTACAAGGGCAAAGGTGTGCTCAAGGCTGTTGGTCACATCAATGACACCATCGGTCCTGCCCTCATCCAGTCAGGGGTCAGTGTGGTAGAACAGGAGAAACTGGACAAGATGATGATAGAGATGGACGGCACTGAAAAAAAGTCTCAGTTTGGGGCCAATGCTATTCTGGGTGTGTCCTTGGCCATATGCAAAGCTGGTGCTGCAGAGAAAGGTGTCCCCCTGTACCGTCACATTGCTGACCTGGCAGGAAACACAGAGCTAGTGCTTCCAGTTCCTGCCTTTAACGTTATCAACGGGGGCTCTCACGCGGGCAACAAGCTGGCCATGCAGGAGTTCATGGTACTTCCTGTAGGGGCGGAGTCTTTCAAGGATGCTGTGCGTGTGGGGGCAGAGCTGTACCAGACGCTGAGGGAAGTGATCAAGGAGAAGTATGGCCAGAACGCCACCAACGTGGGGGACGAGGGGGGGTTCGCCCCAAACATACTGGAGAACACTGAagCCCTGGAGCTGATCAAGACAGCCATTGAGAAGGCAGGTTTCACAGACAAGGTGGTGATCGGGATGGACGTGGCAGCCTCTGAGTTCTACAAAGAGGGCAAGTACGACCTGGACTTCAAGTCTCCGCCCAACGCAGACCGCCACATCAGCGCCCAAGAGCTCTGCGACATGTACCAGGGCTTCGTCAATGACtacccagtggTGTCCATTGAGGATCCGTTTGACCAGGATGACTGGCCGGCCTGGTCCCAGATGACAGCCTCCGTGGGTATCCAGGTGGTGGGGGACGACCTGACCGTCACCAACCCCAAGAGGATAGAGCGCGCCCTGGAGGAGAGGGCCTGCAACTGCCTGCTGCTCAAAGTCAACCAGATCGGGTCCGTCACCGAAGCCATCCAGGCgtgTAAGCTGGCTCAGGAGAATGGCTGGGGGGTGATGGTGAGCCACCGCTCAGGTGAGACAGAAGACACCTTCATTGCTGATCTGGTGGTGGGCCTCTGCACTGGACAAATCAAGACTGGAGCTCCCTGTCGATCAGAGCGGCTGGCCAAATACAATCAACTCATGAGGATTGAGGAGGAGTTAGGGGATCAGGCTCGCTTCGCAGGGCACAACTTCCGGAACCCCGCCGCCCTCTAAGACTCCTCTGGGCTGACGGACACGGACACAGaatcacagacacacatcacATCACTGCAGGGCACAGATGGACTGACAGATGTCCACAGACAGATATACACAACTACCTACAATGAATCCTTCAGACAGATATACATAACTACCTACAATGAATCCTTCAGACAGATCGGTCAGACAGACATATGTTTgtaaggacagagagacagacagactgaataAGACGTTattttccatccctctcttttctccttccctTTACCTCAGTTTTCTCATCTCAATTTCCTCAATTGCCCAACCCTTCCCCTTTCCTCCCACCCTTCCAGGTTaggcaacctttcagttaccacTTCATTTAAAAGCCTGCCACATAATTGTCTGTTACCACCTACATGTAAAAGCTTACCACAGAAACCCTCCAATCAATAAAGATATGAACACTTATGATGTAAACATCAGCCA

Function

NR:

description
PREDICTED: gamma-enolase-like

GO:

id name namespace
GO:0006096 glycolytic process biological_process
GO:0000015 phosphopyruvate hydratase complex cellular_component
GO:0004634 phosphopyruvate hydratase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K01689 ENO, eno; enolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036969197.1 True 1851 mRNA 0.53 11 11987253 12004723

Neighbor

gene id symbol gene type direction distance location
LOC110509582 mlf2 coding upstream 2140 11927476 ~ 11985113 (+)
LOC110509543 LOC106576564 coding upstream 21125 11957772 ~ 11966128 (+)
tnfr tnfr coding upstream 128286 11837883 ~ 11858967 (+)
LOC110509655 NA coding upstream 179133 11791230 ~ 11808120 (+)
mrpl51 LOC100194563 coding upstream 196593 11788492 ~ 11790660 (+)
LOC110537447 LOC106577011 coding downstream 546 12005269 ~ 12053650 (+)
LOC110509740 LOC106605858 coding downstream 85178 12089901 ~ 12108140 (+)
LOC110509764 NA coding downstream 92204 12096927 ~ 12103146 (+)
LOC110537505 LOC106576414 coding downstream 149491 12154214 ~ 12241744 (+)
LOC118945814 NA coding downstream 238317 12243040 ~ 12247913 (+)
G224267 NA non-coding upstream 27358 11959292 ~ 11959895 (+)
G224225 NA non-coding upstream 77699 11909031 ~ 11909554 (+)
G224189 c1r/c1s non-coding upstream 151083 11785487 ~ 11836170 (+)
G224294 NA non-coding downstream 11744 12016467 ~ 12016767 (+)
G224295 NA non-coding downstream 12184 12016907 ~ 12017156 (+)
G224296 NA non-coding downstream 15227 12019950 ~ 12020685 (+)
G224308 LOC106576519 non-coding downstream 65493 12070216 ~ 12078021 (+)
G224309 NA non-coding downstream 80055 12084778 ~ 12088970 (+)
LOC110520911 zyx other upstream 396909 11580308 ~ 11600483 (+)
G224052 gstk1 other upstream 550793 11433120 ~ 11436460 (+)
G224035 NA other upstream 595291 11391333 ~ 11391962 (+)
LOC110509074 LOC106576860 other upstream 812890 11166919 ~ 11174363 (+)
G224297 NA other downstream 16242 12020965 ~ 12022444 (+)
LOC110509826 LOC106576393 other downstream 254598 12259134 ~ 12357204 (+)
LOC110503596 LOC106576258 other downstream 364268 12368841 ~ 12430981 (+)
grik5 grik5 other downstream 655897 12497538 ~ 12664742 (+)

Expression


Co-expression Network