Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110509831 |
| gene name | LOC106576382 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 12439946 ~ 12460864 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: glycogen synthase kinase-3 beta-like |
| id | name | namespace |
|---|---|---|
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004674 | protein serine/threonine kinase activity | molecular_function |
| id | description |
|---|---|
| K08822 | GSK3A; glycogen synthase kinase 3 alpha |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036969338.1 | True | 4042 | mRNA | 0.47 | 10 | 12439946 | 12460864 |
12,436,000
12,440,000
12,444,000
12,448,000
12,452,000
12,456,000
12,460,000
12,464,000
12,468,000
12,472,000
12,476,000
12,480,000
NC_048567.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503596 | LOC106576258 | coding | upstream | 8965 | 12368841 ~ 12430981 (+) |
| LOC110509826 | LOC106576393 | coding | upstream | 82742 | 12259134 ~ 12357204 (+) |
| LOC118945814 | NA | coding | upstream | 192033 | 12243040 ~ 12247913 (+) |
| LOC110537505 | LOC106576414 | coding | upstream | 198202 | 12154214 ~ 12241744 (+) |
| LOC110509740 | LOC106605858 | coding | upstream | 331806 | 12089901 ~ 12108140 (+) |
| LOC110509786 | LOC106576357 | coding | downstream | 2208 | 12463072 ~ 12488166 (+) |
| grik5 | grik5 | coding | downstream | 36674 | 12497538 ~ 12664742 (+) |
| LOC110509875 | LOC106578696 | coding | downstream | 316404 | 12777268 ~ 12781208 (+) |
| LOC110509883 | LOC106605563 | coding | downstream | 348064 | 12808928 ~ 12825486 (+) |
| LOC110503610 | LOC106578751 | coding | downstream | 377188 | 12838052 ~ 12840215 (+) |
| G224426 | NA | non-coding | upstream | 88893 | 12349603 ~ 12351053 (+) |
| G224425 | NA | non-coding | upstream | 90430 | 12348661 ~ 12349516 (+) |
| G224409 | NA | non-coding | upstream | 128622 | 12307188 ~ 12311324 (+) |
| G224405 | NA | non-coding | upstream | 143701 | 12290294 ~ 12296245 (+) |
| G224377 | NA | non-coding | upstream | 185495 | 12253938 ~ 12254451 (+) |
| G224395 | NA | non-coding | downstream | 61122 | 12521986 ~ 12522519 (+) |
| G224394 | NA | non-coding | downstream | 82585 | 12543449 ~ 12546273 (+) |
| G224390 | NA | non-coding | downstream | 85657 | 12546521 ~ 12548469 (+) |
| G224510 | NA | non-coding | downstream | 132776 | 12593640 ~ 12594244 (+) |
| G224297 | NA | other | upstream | 417502 | 12020965 ~ 12022444 (+) |
| LOC110537447 | LOC106577011 | other | upstream | 425141 | 12005269 ~ 12053650 (+) |
| mrpl51 | LOC100194563 | other | upstream | 649307 | 11788492 ~ 11790660 (+) |
| G225451 | NA | other | downstream | 505168 | 12966032 ~ 12966533 (+) |
| LOC110509972 | LOC106596703 | other | downstream | 515309 | 12972069 ~ 12977823 (+) |
| LOC110509979 | LOC106574911 | other | downstream | 540707 | 12985236 ~ 13022032 (+) |
| LOC110510042 | LOC106578847 | other | downstream | 586636 | 13047440 ~ 13074579 (+) |
