XLOC_021598 (CR339055.1)


Basic Information

Item Value
gene id XLOC_021598
gene name CR339055.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 18289074 ~ 18289201 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042869
tgtggccggtgagtgtatgtgtatagcttctgcaactctcacattgtcgcccactgaagctaagcgggGCTGCGCCTGGTCGGTACCTGGATTGGGGACcccatgggaaagctaggttgctgccagaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000084859

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042869 True 128 rRNA 0.57 1 18289074 18289201

Neighbor

gene id symbol gene type direction distance location
XLOC_021596 tafa4a coding upstream 143841 18134313 ~ 18145233 (+)
XLOC_021597 NA coding upstream 152780 18134466 ~ 18136294 (+)
XLOC_021595 CR352232.1 coding upstream 156751 18129860 ~ 18132323 (+)
XLOC_021594 mfsd4ab coding upstream 174184 18103080 ~ 18114890 (+)
XLOC_021593 chia.6 coding upstream 295411 17980875 ~ 17993663 (+)
XLOC_021599 avpr2ab coding downstream 237827 18527028 ~ 18543359 (+)
XLOC_021600 NA coding downstream 399153 18688354 ~ 18691482 (+)
XLOC_021601 myh7bb coding downstream 433514 18722715 ~ 18757078 (+)
XLOC_021602 CR847953.2 coding downstream 442121 18731322 ~ 18731399 (+)
XLOC_021603 emp3b coding downstream 489842 18779043 ~ 18794561 (+)
XLOC_021588 CR381647.1 non-coding upstream 415476 17873526 ~ 17873598 (+)
XLOC_021584 dre-mir-124-5 non-coding upstream 505533 17783413 ~ 17783541 (+)
XLOC_021583 CR381647.3 non-coding upstream 506030 17782508 ~ 17783044 (+)
XLOC_021604 NA non-coding downstream 635269 18924470 ~ 18929002 (+)
XLOC_021606 CR788311.1 non-coding downstream 762284 19051485 ~ 19066987 (+)
XLOC_021607 NA non-coding downstream 816345 19105546 ~ 19119443 (+)

Expression


Co-expression Network