LOC110510592 (hsp70-3)


Basic Information

Item Value
gene id LOC110510592
gene name hsp70-3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14495344 ~ 14498631 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110510592
TACTGTCAATTCATTACAGCATGTCATTTACTGTACAAACTAGAATGTGCTTTGCTGCTTGCTTTCCTGCGTTTCTAATGAATGTGAATCTACAGGCCGGTTGCTGGTAGGAGATATCTGTAGTCTTCTCACAGTGCTTATATCACTGAACAGCCCCCAGACCATGTGAACCAAGTTAAACATGCCCTGAGAAAACCTCCTTTCTCTGTGGACAGGAcaaacttttttcacattttattttttataaatcagAGAAAATACAATAGTCTTCCTTTTCTAATTTCTAACAGCAATGTCTAACAGCAATTCCGCTAACTCCTATACCAGATAAAGTTAGTTGGCTAGCACTGAATGGGCACACAAACTACGTGGGCCTGGAACTTTCTCTGGCTGAGTCACCTGATTCCCTGATGGAATCTCAGTGAGccgtctgctgtctgtctgtcgttatATACTCTGTAGAGACACGGTACTCGCCCTCTTAGTCTCTgtacaggaaaggaagaggagtGCTTCAGTGGAATTGAGCAGCCGTTGTTCTGAGGTTTGTGTGGTAATCTTTGAAGCATTGCACAACTGACTGAGCAAGGTAACTCCTTTTCTAAGAAGCGTTGCATTCAGCTCTGCTTTTTCAGGTTGACTTGCCAGCTCCTGTCCAACTCAAGGGACATGACCTCACTCTCATAATGACACTATTATGCTTTATGTCAGCTATTGGCTGACGGAAGAGCATTAAGAACTAGCATAAAGCTTATCTCAAATTGTTTAAGCAGTGTTTAAGTAGCATGAAGCCAAAAGTTATTGTCAAGCCTGTTTGAATGATTTGTCTATCGCATGACTTTCTGTTTCTGGACACACATGTTGTCCAATGTCCAGGCAAGCCCAAGATGGAAGTAGAgtaaaagggagagaggaagacctTTTTCCCTGAGGAGGTGTCCTCCATGGTGCTCACCAAGATGAAGGAGATTCTGAAGCTTACCTGGGCAAGCCAGTGAACAATGCTGTCATCACAGTCCCTGCCTACTTCAACGACTCCCAGCGCCAAGCAACCAAAGATACTGGAGTGATCTCTGGACTCAATGTCCTGCGTATCATCAACGAGCTCACCACTGCAGCCATCACCTGTGGCCTGGACAAGAAGGTCGGCGGTGAGCGCAAGAGTCCTGTTCTTCGACCTGGGTGGCGGCACCTTAGACGTGTCCATCCTGACCATCGAGGATGGCATCTTTGAGGTCAAGTCCACCGCTGGCGACACCCACCTGGGAGGCCGCATGGTCAATCACTTCATCAGCGAGTTCAAGCGTAAATTCAAGAAGGACATCAGCGGCAACAAGAGGTGGTGCGGCGCCTGCGCACTGCCTGTGAGCGGGCCAAGCGCACCCTGTCCTCCAGTACCCAGGCCAGCATCAAGATTGACTCTCTCTATGAAGGTGCCgacatctacacctccattacgGGGCTCGCTTTGAGGAGCTCAACGTTGACCTGTTCCGCAGCACCCTGGAACCCATGGAGAAGTCTATGAGAGATGCCAAGATGGACAAGGCCCAGATACACGACATCGTCCTGGTGGGAGGCTCGACACGTATCCCCAAGATCTAGAAGCTTCTGCAGGACTTATTCAAATGGGCGAGACCTCAACAAGAGCATCATCCCTGATGAGGCTCTGGCTTATGGCGCCTCTGTGCAGACTGCCATCTTGGCCGGTGACAAGTCAGAGAACGTGCAGGACCTGCTGCTGCTGGACTTAAGATGCTTGGTATTGAGATGGCGGGAGGGGTCATGACTGTGCTCATCAAGAGGAACACCACCATCCCCATCATGCAGACTCAGACCTTCACAACATACTCAGAAAACCAACCCGGAGTGCTCATCCAGGTGAATTAGGGGGAGAGAGCCATGACCAAGGACAACAATATCCTCTGCAAGTTTGAGCCCACTGGAATCCCCCCTGCGCCCAGATCGAGGTGAACTTTGACTTTGACGCCAATGGCCTCCTCAATGTGTCTGCGGTGGACAAGAGCACCGGCAAGAAGAACAAGATCACCATCACCAATGACAAAGGACGTCTGACCAAGGAGGACATTGAGAGCATGGTGCAAGAGGCTGACCAGTACAGGGCTGAGGACGAGGCACAGAAGGAGAACGTCACAGCTAAGAACTCGCTGGAGTCCCTGGCTTTCAACATGAAGAGCACAGTGGACGACAAGAAGCTCACGGAAAAGATCAGCCCGGAGGACGTGTTCTTTGTGGTTAGCAATGGTTTCACATTGATGCATTTCCTCCCATGGTAAAAGTAGGCTTCACAACAGCAGAGAAGGATGAGTATGAGCACCAGCAGAAGGAGCTGGAGAAGGTGTGTAAGTAACCCCACCAATCTGTATCAGGGTGCCGGAGGCCCGCCAGGAGGTATGCCAGGAGGCTTCCCTGGAGGTGCTGGAGCTGGCTCCTCCTCTGGCCCAAACATCAAGGAGGTCGACAAAAATCCCTGACCTCTACAGGAGAGAA

Function

NR:

description
heat shock cognate 70 kDa

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110510592 True 2511 mRNA 0.50 7 14495344 14498631

Neighbor

gene id symbol gene type direction distance location
LOC110510603 LOC106578002 coding upstream 151 14484922 ~ 14495193 (+)
LOC110510729 LOC106578340 coding upstream 24313 14468093 ~ 14471031 (+)
LOC110510549 LOC106578340 coding upstream 52430 14431940 ~ 14442914 (+)
LOC118964341 NA coding upstream 88386 14406121 ~ 14406958 (+)
LOC110510776 LOC106578012 coding upstream 164034 14327225 ~ 14331310 (+)
LOC110510788 ctrl coding downstream 1828 14500459 ~ 14501779 (+)
si:dkey-42l23.2 cml1 coding downstream 7570 14506201 ~ 14508126 (+)
proser3 LOC106577938 coding downstream 13028 14511659 ~ 14519712 (+)
LOC110510370 LOC106605615 coding downstream 27074 14525705 ~ 14601609 (+)
LOC110503699 NA coding downstream 130253 14628884 ~ 14631162 (+)
G226807 LOC106578340 non-coding upstream 105503 14389198 ~ 14390428 (+)
G226797 NA non-coding upstream 124266 14367459 ~ 14371078 (+)
G226793 NA non-coding upstream 134566 14360504 ~ 14360778 (+)
G226774 NA non-coding upstream 181720 14313355 ~ 14313624 (+)
G226845 LOC107675859 non-coding downstream 24550 14523181 ~ 14524514 (+)
G226889 LOC106577926 non-coding downstream 120309 14618940 ~ 14623217 (+)
G226931 NA non-coding downstream 187573 14686204 ~ 14686513 (+)
G226935 NA non-coding downstream 191019 14689650 ~ 14689945 (+)
G226902 NA non-coding downstream 195985 14694616 ~ 14747965 (+)
G226791 NA other upstream 85263 14408872 ~ 14410081 (+)
LOC110510822 smg9 other upstream 215489 14278350 ~ 14284963 (+)
G225920 NA other upstream 448496 14046586 ~ 14046848 (+)
LOC110503682 trp-iii other upstream 491418 14001152 ~ 14003950 (+)
G226941 NA other downstream 204970 14703601 ~ 14703975 (+)
LOC118944476 LOC106605624 other downstream 443519 14942150 ~ 14984145 (+)
LOC110510950 LOC106605624 other downstream 491889 14984771 ~ 14991394 (+)
G227405 NA other downstream 498528 14997159 ~ 14998075 (+)
LOC110511049 LOC106605627 other downstream 574513 15072005 ~ 15095913 (+)

Expression


Co-expression Network