LOC110510471 (LOC106577854)


Basic Information

Item Value
gene id LOC110510471
gene name LOC106577854
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14743721 ~ 14777153 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021591836.2
GGCCCAAATCTCACCTGGCGTTCTGGACGTTTACAAAGGTGTGGGCGTGGCTAAATGTTGTGGGTGTGGATGGAAAGGGTCAGTTTCAAGAAACAATTGTTGACTGAAACAAACACCTCAGCCACGACAACCACAAAGGTGTCACAACTTTTAACCAGAGGAGTCATTGAAGAATTTTACCAATGGTAAAAAAGTTGCTACTTTTGATCATAATTTCATTAATCTCCCTCCCGCGTTGACTTGAAACGTCTTGGACCTCGGGAGGGAGGAATATAGTCCCGTGTTTCTAAATCGTTTTTGTTTGATTGAACTGTCTACCAACTGGATTTAACTCTTAAGTAATTGAAGAAAATGAATTCCGCACGATTTGAATACGAGGGGCAGAACGGGCGGCATGAGCAGGTCACCTTCTTGGATAACAAAGAGAAGATGGCATCGAAGAAGAAGACTGGAGTGATAGTGGGAGTCCTCATCACTCTGCTTGTCTTGGCAGCCGTGACAGGAATCCTCATCTGGTTCTTTGTTAGCAGGGAGTCTGCGGCCACCATAAGTATGAAGCGTGTCCCAGCTCAGCGGCTGTATAGCGGGCACATGAAGCTGGACAATGTGCCCTACAACCAGAATCTGGAGGACCCCACCAGCACAGAATTCAACAAGCTGGCAGACGACCTGGAAGAGATTCTTAAGATCAACTACAAACAAGTTGAGTTCCTCTCCAAGTACTACACCACATCTGTGGTGACTGCCTTCAGtgaggGGGTGCTGGCCTACTACTGGACCCAGTTTGACATCCCGGCAGCGGACCTGGAGATACTGCCAGAGTTCTCTGAGGAGCGGGTCCTGGAGGTGCTGTGGAACGGCATCAGGGAGCAGGGCAAACGCTCCGGCCAGAGCCTCCACATCAGCCAAGTCACTGCCTCACgCACAGACCCCAGGATGGCCAGGAACCCCAGAGCCGATTTCGAGTGTTTCTTCCGGTTGGAGGCTGGCACTTTAGTTCAGAGCTTCCAGTCTCCAGGCTTTCCAGATCAGTACCCGGCCCAGTCCCGCTGCCAGTGGCAGatcagagccccggaacagaacGCCATCTCAGTCCGCTTCGTCTACTTCCACATAGAGGACGACTGCTCTGATGATTTTGTGTCCATCTACGACTCCCTCAGCCCGGATGAGTCCCAGGCCATCACTCACAAGTGTGGTCAGAGGCCTCCCAGCAATCCCCTGGACGTGGTGTCGTCCAGTAACATCATGCTCATCAACCTTGTCACCGACAGTGCTGTCCAGAGGCCCGGCTTCAGTGCAGAGTACTCAATCATCCCCCTAACAACATCCAAAAGTTGTGGAGGAGTCCTGAATGATGCTCAGGGGAACTTTAGCTCTCCCCATTACCCCAGCTTCTATCCCCCAGCCCTGGACTGCAAGTGGACCATTGAGgTCCCTGCAGGGAAGCAGGTACGTGTCAAGTTCACCATGTTCCGTATGAAGGAGCCGAGAGTGGACGTCAGGGTGTGTCATAAAGACTACATAGAGGTCATGGGCACCAAATACTGTGGGGAGTTGTCTTCTCTGGCCCTTACCAGTACCACCAGCTCTCTGGTTGTGATGTTCCACTCTGACGAGTCCTTCACAGACAAAGGCTTCCAGGCTCAGTACAACGCATACGATCCTTCCAACCCTTGCCCCAACCAGTTTGCCTGTGGCTCTGGGTTCTGTATCAAGAAGGAGCTGCATTGTGATGGCTGGAACGACTGTGGGGACATGAGTGATGAAATGAACTGCAAATGTGAAAAGGACCAGTTTGCCTGTGACAACGGGATGTGCAAGCCCAAGTACTGGGTGTGTGACCGTGTCGACGACTGCGGTGACGAGAGTGATGAGAAGCACTGCAGCTGTGCTAAGAATGAGTGGAGGTGTGGTGACGGGACCTGTTTGCCTCAGGATGTGGTGTGTGACACTAAGACGGACTGTGTGGACGGGAGTGACGAGGCTTCCTGTACCGTCTctCCTGGCACCTGCTCTGACTTCAGCTTTAAGTGTAAGAACGAGGCGTGTGTGAACAAGGTGAACGCTGAATGTGACCGGGTCAAAGACTGCACAGACGAATCAGATGAGGAGGGCTGCGACTGTGGCGTCCGGCCATATAAGCTTAACCGTATTGTGGGCGGGGAGAATGCGCAGCTGGGGGAGTGGCCCTGGCAGGTGAGCCTGCACTTCCAGACCCGTGGGCATGTGTGTGGCGCGTCAATCATCTCCAACCGCTGGCTCCTGTCTGCCGCCCACTGCTTCAAGACCATCAGCCCTGAaAACCACGTGGCCGCCAACTGGCAGACGTACAGTGGCATGCAGGACCAGTATAAGCAGGATAATGTTCAGAGAAGCTCGGTGAAGACCATTATCACCCACAATGACTACAACCAGATGACCTATGACTACGACATCGCCCTGCTGGAGCTGAGCCAGCCGCTGGAGTTCACCAACACCATCCACCCCATCTGCCTACCCGCACGCTCCCACCTCTTCCCTGCTGGCATGTCCTGTTGGGTTACAGGCTGGGGCACGCTCCGCGAAGGAGGTGCCATAGCACGGCTGCTGCAGAAGGCGGAGGTGAAGATCATTAACGACACGGTGTGTAACGTGGTCACCGAGGGTCAGGTCACATCCAGGATGCTCTGCTCCGGCTTCCTGTCCGGAGGAGTCGACGCCTGTCAGGGAGACTCGGGGGGTCCCCTGGTGTGCTTCGAAGAAAGTGGAATGTGGTTCCAGGCAGGCATCGTGAGCTGGGGTGAGGGCTGCGCTCGTCGGAACAAGCCCGGCGTCTACTCGCGCGTCACCAAGCTGAGAGATTGGATCCGCAAGAACACGGGGGTTTGATGATGAGGGGATATggggaaggggggaggggggggggtgaagacagCGGGTAGACAATTTGAGGGTctgacaggacaagacaaaaaatAAGGAATATGGAACATTGCGTCTGATTGAGGACGAGTCCCCCCATGATGACCAGAGCTATCTAGCCAGCCTCAACCAGCCTCCGACACCCACTGAGGGCCTGCATGGGGCTAGCTACTGCTCAGACGAAGGATTTCAAATGGGTTTGGGATTAGGTTTTTATGCTGTACTGATGCAACCCTTGTTCTCGAAGGCTCCGAGGACCAGCAAGACTCCTGCACCTCCATCAATCATGTCATGTTCCACTGGTTTGATTAATATTCTCCCAGTGTAAATAATGGAAGATGTATATTTTGAGGACACACTTTGTTTTTGGTGGTATTTGCCTAGTTTCCACCATTTTTATGATGTGAGATCACATCTTCTGTTGGGCAGACAGACATGCCAAATGAACTGAGGGAATCAGAAATAGAACAGAAATAGAATagatataaaataaatattttagagtatagtttttttttttttacaatgtattTCTTTACCAGCTGTTTTCACCTGACAATTTTCACTTAAAGTGCCTAGACAAGAACATGAAATGTTTTATAAGTGAGTGTGATATTATCAATGCAGAGATGCATGGAATCTTGAGTTCTAACAAAGATTGTCTattgcagtgccttcagaatcaATTCACACCCTTTGATTTATTACAcatttttgttacagcctgaattaaaaatggatgaaatataaacaaatcacccatctacacacaataccccataatgacaaagtgaaaacctaTTTTTAGAAtttgaatacataatttacatatgtattcacacccctgagtaaaTTCATGTTATAATTACCTTCGGCAGAGGTTACAGCTGCGAGTCTTTCTTGGTAAGTCCCTATGAGTTTTccatacctggattgtacaatatttgcacattattcttttccatattcttcaagctctgtcaagttggttgttgatcattactagacaaccattttcaagtcttgccataggttTTCAAGCAGATTTTAATTCGAAACTGTCACTAAGCCACTTaggaatattcaatgtcgtcttggaaagcaactccagtgtatatttggccttgtgttttaggttattgtcctg
>XM_036975396.1
CTGCCCCAACTTCCAGGTATTCTGATACCCTGTGGATCCCAGACCTGTCCTGACTCAATCCCCCTCCAGCCTCGCTGCTGCTCACCCACAGAGGAAGACTACTGAGAAGAAAGTTAGTCGCTGCACAGAGGAGtttagagagggggggaagGGGCAGAACGGGCGGCATGAGCAGGTCACCTTCTTGGATAACAAAGAGAAGATGGCATCGAAGAAGAAGACTGGAGTGATAGTGGGAGTCCTCATCACTCTGCTTGTCTTGGCAGCCGTGACAGGAATCCTCATCTGGTTCTTTGTTAGCAGGGAGTCTGCGGCCACCATAAGTATGAAGCGTGTCCCAGCTCAGCGGCTGTATAGCGGGCACATGAAGCTGGACAATGTGCCCTACAACCAGAATCTGGAGGACCCCACCAGCACAGAATTCAACAAGCTGGCAGACGACCTGGAAGAGATTCTTAAGATCAACTACAAACAAGTTGAGTTCCTCTCCAAGTACTACACCACATCTGTGGTGACTGCCTTCAGtgaggGGGTGCTGGCCTACTACTGGACCCAGTTTGACATCCCGGCAGCGGACCTGGAGATACTGCCAGAGTTCTCTGAGGAGCGGGTCCTGGAGGTGCTGTGGAACGGCATCAGGGAGCAGGGCAAACGCTCCGGCCAGAGCCTCCACATCAGCCAAGTCACTGCCTCACgCACAGACCCCAGGATGGCCAGGAACCCCAGAGCCGATTTCGAGTGTTTCTTCCGGTTGGAGGCTGGCACTTTAGTTCAGAGCTTCCAGTCTCCAGGCTTTCCAGATCAGTACCCGGCCCAGTCCCGCTGCCAGTGGCAGatcagagccccggaacagaacGCCATCTCAGTCCGCTTCGTCTACTTCCACATAGAGGACGACTGCTCTGATGATTTTGTGTCCATCTACGACTCCCTCAGCCCGGATGAGTCCCAGGCCATCACTCACAAGTGTGGTCAGAGGCCTCCCAGCAATCCCCTGGACGTGGTGTCGTCCAGTAACATCATGCTCATCAACCTTGTCACCGACAGTGCTGTCCAGAGGCCCGGCTTCAGTGCAGAGTACTCAATCATCCCCCTAACAACATCCAAAAGTTGTGGAGGAGTCCTGAATGATGCTCAGGGGAACTTTAGCTCTCCCCATTACCCCAGCTTCTATCCCCCAGCCCTGGACTGCAAGTGGACCATTGAGgTCCCTGCAGGGAAGCAGGTACGTGTCAAGTTCACCATGTTCCGTATGAAGGAGCCGAGAGTGGACGTCAGGGTGTGTCATAAAGACTACATAGAGGTCATGGGCACCAAATACTGTGGGGAGTTGTCTTCTCTGGCCCTTACCAGTACCACCAGCTCTCTGGTTGTGATGTTCCACTCTGACGAGTCCTTCACAGACAAAGGCTTCCAGGCTCAGTACAACGCATACGATCCTTCCAACCCTTGCCCCAACCAGTTTGCCTGTGGCTCTGGGTTCTGTATCAAGAAGGAGCTGCATTGTGATGGCTGGAACGACTGTGGGGACATGAGTGATGAAATGAACTGCAAATGTGAAAAGGACCAGTTTGCCTGTGACAACGGGATGTGCAAGCCCAAGTACTGGGTGTGTGACCGTGTCGACGACTGCGGTGACGAGAGTGATGAGAAGCACTGCAGCTGTGCTAAGAATGAGTGGAGGTGTGGTGACGGGACCTGTTTGCCTCAGGATGTGGTGTGTGACACTAAGACGGACTGTGTGGACGGGAGTGACGAGGCTTCCTGTACCGTCTctCCTGGCACCTGCTCTGACTTCAGCTTTAAGTGTAAGAACGAGGCGTGTGTGAACAAGGTGAACGCTGAATGTGACCGGGTCAAAGACTGCACAGACGAATCAGATGAGGAGGGCTGCGACTGTGGCGTCCGGCCATATAAGCTTAACCGTATTGTGGGCGGGGAGAATGCGCAGCTGGGGGAGTGGCCCTGGCAGGTGAGCCTGCACTTCCAGACCCGTGGGCATGTGTGTGGCGCGTCAATCATCTCCAACCGCTGGCTCCTGTCTGCCGCCCACTGCTTCAAGACCATCAGCCCTGAaAACCACGTGGCCGCCAACTGGCAGACGTACAGTGGCATGCAGGACCAGTATAAGCAGGATAATGTTCAGAGAAGCTCGGTGAAGACCATTATCACCCACAATGACTACAACCAGATGACCTATGACTACGACATCGCCCTGCTGGAGCTGAGCCAGCCGCTGGAGTTCACCAACACCATCCACCCCATCTGCCTACCCGCACGCTCCCACCTCTTCCCTGCTGGCATGTCCTGTTGGGTTACAGGCTGGGGCACGCTCCGCGAAGGAGGTGCCATAGCACGGCTGCTGCAGAAGGCGGAGGTGAAGATCATTAACGACACGGTGTGTAACGTGGTCACCGAGGGTCAGGTCACATCCAGGATGCTCTGCTCCGGCTTCCTGTCCGGAGGAGTCGACGCCTGTCAGGGAGACTCGGGGGGTCCCCTGGTGTGCTTCGAAGAAAGTGGAATGTGGTTCCAGGCAGGCATCGTGAGCTGGGGTGAGGGCTGCGCTCGTCGGAACAAGCCCGGCGTCTACTCGCGCGTCACCAAGCTGAGAGATTGGATCCGCAAGAACACGGGGGTTTGATGATGAGGGGATATggggaaggggggaggggggggggtgaagacagCGGGTAGACAATTTGAGGGTctgacaggacaagacaaaaaatAAGGAATATGGAACATTGCGTCTGATTGAGGACGAGTCCCCCCATGATGACCAGAGCTATCTAGCCAGCCTCAACCAGCCTCCGACACCCACTGAGGGCCTGCATGGGGCTAGCTACTGCTCAGACGAAGGATTTCAAATGGGTTTGGGATTAGGTTTTTATGCTGTACTGATGCAACCCTTGTTCTCGAAGGCTCCGAGGACCAGCAAGACTCCTGCACCTCCATCAATCATGTCATGTTCCACTGGTTTGATTAATATTCTCCCAGTGTAAATAATGGAAGATGTATATTTTGAGGACACACTTTGTTTTTGGTGGTATTTGCCTAGTTTCCACCATTTTTATGATGTGAGATCACATCTTCTGTTGGGCAGACAGACATGCCAAATGAACTGAGGGAATCAGAAATAGAACAGAAATAGAATagatataaaataaatattttagagtatagtttttttttttttacaatgtattTCTTTACCAGCTGTTTTCACCTGACAATTTTCACTTAAAGTGCCTAGACAAGAACATGAAATGTTTTATAAGTGAGTGTGATATTATCAATGCAGAGATGCATGGAATCTTGAGTTCTAACAAAGATTGTCTattgcagtgccttcagaatcaATTCACACCCTTTGATTTATTACAcatttttgttacagcctgaattaaaaatggatgaaatataaacaaatcacccatctacacacaataccccataatgacaaagtgaaaacctaTTTTTAGAAtttgaatacataatttacatatgtattcacacccctgagtaaaTTCATGTTATAATTACCTTCGGCAGAGGTTACAGCTGCGAGTCTTTCTTGGTAAGTCCCTATGAGTTTTccatacctggattgtacaatatttgcacattattcttttccatattcttcaagctctgtcaagttggttgttgatcattactagacaaccattttcaagtcttgccataggttTTCAAGCAGATTTTAATTCGAAACTGTCACTAAGCCACTTaggaatattcaatgtcgtcttggaaagcaactccagtgtatatttggccttgtgttttaggttattgtcctg

Function

NR:

description
suppressor of tumorigenicity 14 protein homolog

GO: NA

KEGG:

id description
K08670 ST14, PRSS14; suppressor of tumorigenicity protein 14

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021591836.2 False 4051 mRNA 0.50 19 14743721 14777153
XM_036975396.1 True 3824 mRNA 0.51 19 14744967 14777153

Neighbor

gene id symbol gene type direction distance location
LOC110503699 NA coding upstream 112559 14628884 ~ 14631162 (+)
LOC110510370 LOC106605615 coding upstream 142112 14525705 ~ 14601609 (+)
proser3 LOC106577938 coding upstream 224009 14511659 ~ 14519712 (+)
si:dkey-42l23.2 cml1 coding upstream 235595 14506201 ~ 14508126 (+)
LOC110510788 ctrl coding upstream 241942 14500459 ~ 14501779 (+)
LOC110510982 NA coding downstream 142446 14919599 ~ 14941872 (+)
LOC118944476 LOC106605624 coding downstream 165954 14942150 ~ 14984145 (+)
LOC110510950 LOC106605624 coding downstream 207618 14984771 ~ 14991394 (+)
LOC110510993 fxyd5a coding downstream 221523 14998676 ~ 15022578 (+)
LOC110511152 NA coding downstream 278677 15055830 ~ 15061264 (+)
G226935 NA non-coding upstream 53776 14689650 ~ 14689945 (+)
G226931 NA non-coding upstream 57208 14686204 ~ 14686513 (+)
G226889 LOC106577926 non-coding upstream 120504 14618940 ~ 14623217 (+)
G226845 LOC107675859 non-coding upstream 219207 14523181 ~ 14524514 (+)
LOC110510729 LOC106578340 non-coding upstream 273458 14468093 ~ 14471031 (+)
G227323 NA non-coding downstream 112225 14889378 ~ 14889745 (+)
G227333 NA non-coding downstream 118880 14896033 ~ 14896321 (+)
G227354 NA non-coding downstream 138899 14916052 ~ 14916301 (+)
G227369 NA non-coding downstream 150355 14927508 ~ 14927748 (+)
G226941 NA other upstream 39746 14703601 ~ 14703975 (+)
G226791 NA other upstream 333640 14408872 ~ 14410081 (+)
G226807 LOC106578340 other upstream 353293 14389198 ~ 14390428 (+)
LOC110510822 smg9 other upstream 463866 14278350 ~ 14284963 (+)
G225920 NA other upstream 696873 14046586 ~ 14046848 (+)
G227405 NA other downstream 220006 14997159 ~ 14998075 (+)
LOC110511049 LOC106605627 other downstream 295991 15072005 ~ 15095913 (+)
G227606 NA other downstream 466793 15243946 ~ 15244282 (+)

Expression


Co-expression Network