LOC118944484


Basic Information

Item Value
gene id LOC118944484
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 15064079 ~ 15066323 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118944484
ATGAAGCAGGTGGACAATGAGTTGGTCAACCTGCCTATGTATCTGAACAGCAGTCAGGTGTCTGTCTACAGGAGTGGCTGGTACTCTGTGGTCATCACCAGCTTTGGCCTTAACGTCTCCTTCGACTGGAACAGTGCAATGTTTGTCACCCTACCCTCCACCAACAGGGCGCTGTCTGTGGCCTGTGTGGCAACTAAGATACCAAGCCTGTCCCCTCCCTCAGGTTACCTCACCCAGTGTAACGAGGGCTTCTCGGTGACCACTGTGTCCGCGTCGCCCAGTGTGGCTGTGTTCATAGTGGCCGCTACTACAACACCAACCAGATGTTCTACCCCAACCGGAAGTCGTTGGGCGGCTGTGCCTGCCAAACACTGCGGCTGCTCCTCCCAGGGTCGCTACTACAAGGCTGGTCAGCGCTTCTGGGCAGAccgtgtctgtgtgagtgtaaCACCTCTCTGGGCATGGTGAACTGCTTCGAGGCCTCCTGTTCGGCCAACAAGAAGTGCAGTCTGCTGGATGGGTAACACTCCTGCCTACCACCCAGCACTTGCACCGTTTCAGGTGACTCTCATTACCTTCGACGGCCACCGGTTTGACTACCAGGGTACTTGTGTGTACCAGCTGGTGGCGGTGTGCACCCAGAAGCCGGGCCTGGTGCCGTTCAAGGTGACAGTGCAGAAATGTGGCCTACATGAAGATTGTCATCTACGGCGTCTCCCTCACCATCAGCAGGGACTACCCCTTCAAGATCCTGGGGAGTGTTACTGGatagggacagatgtatagagggggGTTAGTTAGTATATTTACAGGACTTTATAATTGTTATTTAACACGTAGTTTATTCTACCACTCATGATGCTGTTACAGCTATTTTAATTAAGCTGTCTAGTCATTAATCCTTGCGGATTTAATTAAATTATCGTTTAACTGGGAATTACAATGAAAAAAATCTATAAACTCCCATTTAATTTTCTTTACTCTTTCGTCTCGGTTGGATGGACAGCTTGCGTCCCTGCCCCTGGAGCTGAAGAGTCAGCTGATGGTGTTCCGTAGTGACCGAAGGGCGGTGGTGGAGACTGCTGCGGGCATCACGCTGACCTTTGACAAACTCCCCAGCACCTACCA

Function

NR:

description
IgGFc-binding protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118944484 True 1128 mRNA 0.52 4 15064079 15066323

Neighbor

gene id symbol gene type direction distance location
LOC110511152 NA coding upstream 2815 15055830 ~ 15061264 (+)
LOC110510993 fxyd5a coding upstream 41501 14998676 ~ 15022578 (+)
LOC110510950 LOC106605624 coding upstream 72685 14984771 ~ 14991394 (+)
LOC118944476 LOC106605624 coding upstream 79934 14942150 ~ 14984145 (+)
LOC110510982 NA coding upstream 122207 14919599 ~ 14941872 (+)
LOC110511049 LOC106605627 coding downstream 5682 15072005 ~ 15095913 (+)
LOC110511142 fxyd7 coding downstream 32542 15096725 ~ 15102227 (+)
tyrobp tyrobp coding downstream 49534 15115857 ~ 15132280 (+)
LOC118944490 LOC106578274 coding downstream 70449 15136772 ~ 15138356 (+)
LOC118944493 LOC106578274 coding downstream 72235 15138558 ~ 15141461 (+)
G227492 NA non-coding upstream 18825 15044947 ~ 15045254 (+)
G227489 NA non-coding upstream 20126 15043663 ~ 15043953 (+)
G227369 NA non-coding upstream 136331 14927508 ~ 14927748 (+)
G227354 NA non-coding upstream 147778 14916052 ~ 14916301 (+)
G227569 NA non-coding downstream 81444 15147767 ~ 15147995 (+)
G227570 NA non-coding downstream 81758 15148081 ~ 15148286 (+)
G227573 NA non-coding downstream 85025 15151348 ~ 15151581 (+)
G227405 NA other upstream 66004 14997159 ~ 14998075 (+)
G226941 NA other upstream 360104 14703601 ~ 14703975 (+)
G226791 NA other upstream 653998 14408872 ~ 14410081 (+)
G227606 NA other downstream 177623 15243946 ~ 15244282 (+)
zgc:162160 LOC106605640 other downstream 622020 15672260 ~ 15697397 (+)
LOC118944532 NA other downstream 1447180 16477925 ~ 16515897 (+)
LOC110503770 LOC106605493 other downstream 1577028 16619192 ~ 16674738 (+)

Expression


Co-expression Network