LOC110511142 (fxyd7)


Basic Information

Item Value
gene id LOC110511142
gene name fxyd7
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 15096725 ~ 15102227 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005041175.1
GTTTGTACAGGGCTTGGCAGTTGCTCCGCCTGTGCATGTGGAATGCATCAGTCTTTGGAAGAGGAGTCCCCACCAAATACAGGATGGCTTTACTAATACTATTTTACTGTTACCATGTCtgtcctttccccctctctcccctcccacagTGGAACCCATGTCTGAATGCTGCCTATTGGTTAAGATATTACAGTCCCGCACTCCCTCCCTAAATCCAACAACACTGCCCAGCCATTCAACCAACTAAGCAATCACCCTACAGAGCATCACATTACAGTCAAATGTCTCAAAATAGTCTAGTAGTCTAACTCTGTGACATTTTTGAAAATCAAGTGTTCTTGTCAACCAAGCAATATTAAGGAAATGTCTGCATTAGGACTTTTTTGGGGCCCCTAGTTGAGAATGGGGGCCGTTGTTGCATGGGTTGGCAGTGTGGGTGGATGGCCTCAAAGAGTGTATGTTTACAGCCAATGGCATGCCGACccagtctcttcctctcccctaaCCTTTGAGAGAGGACACCGATTGGGAAGATCCTGACATATCTCTGCATTTTGCCCCAAATTGAATCCTGTGATTGTCAAAACTTTGTGGCCCCAGCCCCTTCTGTGCATGGATACAGTTGACCTAATCCGTCTAAAATACCTTCTCTTTGGTCAGAACACACATGATCTTGGTTACATTGTGGTTGTTTCCACAAAGCTTTGAGGTGAACTGAACTGTCTAAACTATCCAGGATTGCTTCCTTTAATTTCATTTCTCTCCTTGTGTCAGAGTGAATAACTGTCTCCTCTTGTCTTCTCGTCTTCAGCTCTAATCCAGCAGGCACCCAAATACCAAAGACAGAGGTGCCTCCTCAAACAGTATAGATGAAGTGTGCATGGAGGCGAGGGAGAGTCATCATGGGAGGTGCTGCAGAGAGGCCAACACACATAataacacacactctcacatttATGGCTGCCACACACCAGCACCCATTGGAACATCAAGTATGGTGCACACCCAGCCCATGCTGACCAGAAGAATGACTGAATTGTCATTCTTgatttaaataaaatgtatatcaAGCCAAGATGAAGATGTTACTCTTAACCGTCTTTGTGACTTGTGTATTAGGTGCTATCAATCTACCTTGCCCAGGAGAGAATGTAAAGTAGCCTTCAGTGCTGATTTGGGGTTTATCCTTACCCCAACTGGCACCAAAAGCACCTAAAAGCAAAAAAACATACCTGGCGCAAGATCAGCTTTCAGGTGCACTGTAAATCTATATCATGATATGGGTAGTGTTGAAACAGAACTGAATGCTGTGCTCTCTCTGTTCCTTGCTTTTGACTTCATGCACACCCAAGAAAGTTGATTGCATGTCTCGTTTTACTGTATAGTACTCTCAATGCACTTTAGAAATCTACAACTTTATCATCCAGTCGTGATTTAGGATTTCACATTGGACCTGTATTATTAACCTCCAGCATGAATTAAGATATCAAACCAACCCCATTATCTCACTGTTTTACTGATGGTTGGCTCAGGATCTATCTGCTGTCATTTTTGATGGCATTAAGTGGACTGccgtgtgtggttgtgttctagGTAGCAATGAGAAGGATGTCAACCCCATGTCAGATGTTAATTTGAAACAGAAGCAGGAATGAAGTCTCCTGTCATTCTCTGGGGTCTGTAAGAGGGTGCCACCAGTATAGTATTGTATGTCAACAGCCTTTTTCTTTCTCCTATGGCATTTTAAGTTACATTGCACGAGTAGAATCATTCAAAGCACTAAAAAGGTATTACCTTGGGTGTGAAGGAGCGGGCATTTCAAAAGTGTATGAGTTTAAGCTTAACGAAAAGATCAATACATTAAGATAAGAAGTCATAGTAACTAGCTGCAAATAAAATGTCTGTATTATCATTATTTAGAGCTGTTTCTAACTTGCTGCAAGTACAATGTCTGTTATCTTCAGATATTTTTATTTACCGGTATGCAGCACTAGTAATGCCTGATCCTGAGCCAATGGCGTAACAGTTAACCAAAAGCAAATGAGTGATTCTCACCAGAGCTAACCAATAAGACAGCTGCTGCAATAAAAATCACCCTGTATACAATGGTC
>TU260287
CGCCAATGGGTGGAATAGGGAGAGACCTGTTAGCGCATTCCGCCTCTCGCAGTTTCCCACGCCTCCTCGGGGTATAATGATAGTAGGCTACTCGAGTGCAGTAGAAAACCATCCGCATTGGCAGGcacatttttttttcaacttcACACGGTCTTTGGGGGATACCTCAGTAGACTGAGGCTGCAGTATTGAAAAGCCTATAACCGAATGCAGTGCCTGTGCATCACCACCAGAGGACCCCCCCATGCCTTCTAAGTGTTGGTGCAATTTACTTTATTGAGCCGCagttttctttcttttcttccaATCCTACTCCACACACCTCAAAAGTGCGCGTCTTCCCATTTTCTGTCCGCTGACCTGAAAACCTGCATCGGGGCGCAAGAGAGAGACTCAGCAGACAAAGACCCAGTATATCCAGACTGCAGTCATGGCAACTGAAAGAGAATCGATGTTTCATGATCAAAGTGACTTTGAATATGATTATGAGACACTTCGAACTACAGGGGTCATCATTGGTGTGATCTTGTTTGTGTCTGGTATCCTAATAGCTCTTAGTAAAAAACTCACATGCTCAAAATCGTCTTCCAACTCTAATCCAGCAGGCACCCAAATACCAAAGACAGAGGTGCCTCCTCAAACAGTATAGATGAAGTGTGCATGGAGGCGAGGGAGAGTCATCATGGGAGGTGCTGCAGAGAGGCCAACACACATAataacacacactctcacatttATGGCTGCCACACACCAGCACCCATTGGAACATCAAGTATGGTGCACACCCAGCCCATGCTGACCAGAAGAATGACTGAATTGTCATTCTTgatttaaataaaatgtatatcaAGCCAAGATGAAGATGTTACTCTTAACCGTCTTTGTGACTTGTGTATTAGGTGCTATCAATCTACCTTGCCCAGGAGAGAATGTAAAGTAGCCTTCAGTGCTGATTTGGGGTTTATCCTTACCCCAACTGGCACCAAAAGCACCTAAAAGCAAAAAAACATACCTGGCGCAAGATCAGCTTTCAGGTGCACTGTAAATCTATATCATGATATGGGTAGTGTTGAAACAGAACTGAATGCTGTGCTCTCTCTGTTCCTTGCTTTTGACTTCATGCACACCCAAGAAAGTTGATTGCATGTCTCGTTTTACTGTATAGTACTCTCAATGCACTTTAGAAATCTACAACTTTATCATCCAGTCGTGATTTAGGATTTCACATTGGACCTGTATTATTAACCTCCAGCATGAATTAAGATATCAAACCAACCCCATTATCTCACTGTTTTACTGATGGTTGGCTCAGGATCTATCTGCTGTCATTTTTGATGGCATTAAGTGGACTGccgtgtgtggttgtgttctagGTAGCAATGAGAAGGATGTCAACCCCATGTCAGATGTTAATTTGAAACAGAAGCAGGAATGAAGTCTCCTGTCATTCTCTGGGGTCTGTAAGAGGGTGCCACCAGTATAGTATTGTATGTCAACAGCCTTTTTCTTTCTCCTATGGCATTTTAAGTTACATTGCACGAGTAGAATCATTCAAAGCACTAAAAAGGTATTACCTTGGGTGTGAAGGAGCGGGCATTTCAAAAGTGTATGAGTTTAAGCTTAACGAAAAGATCAATACATTAAGATAAGAAGTCATAGTAACTAGCTGCAAATAAAATGTCTGTATTATCATTATTTAGAGCTGTTTCTAACTTGCTGCAAGTACAATGTCTGTTATCTTCAGATATTTTTATTTACCGGTATGCAGCACTAGTAATGCCTGATCCTGAGCCAATGGCGTAACAGTTAACCAAAAGCAAATGAGTGATTCTCACCAGAGCTAACCAATAAGACAGCTGCTGCAATAAAAATCACCCTGTATACAATGGTCTTATTGATGTATTGTTTACAGTTATTTCCCATATCTTTTAATCTGAACTTTTATCAATACATACATGTGGATTAAAATAGAGTATAAAATAGATGACAAATAGAGATATTTGAAGAACAGATTTAATTccagggttaagtttaggcaatTCAGTTAATCAGAAGGATACATTCAGTGAAAAGTAACAGGAGTATTACACTGTTACAAACTGTCAAAGTAGACCCAAGCAGCCAAAATCACCAGATTCTCTCGTACCATTTTTTTAACGATAACATCAGTTATTCTCCCTCATGTTAACTCACCTATGATTTAGACCTAGGAACACATAAAGACATCTCTTTATGTTCCTTGACTAAGACTGCCCAGGTTCCAAAACTAGGGGAAATCACAGTCAAGTCTGGGGAAATGTTGTGTCATATCTCCAATGAGATGTTttattttgttgtattttctaTGCCACTTACACTTATGAAGTGGTATATTCACTACAGCAATATTTCAAAGGGCACATGCATGCTACCTCAttggagatttttttttaaaacagtcaTAAAAGGTATATGAGTAAGTGATGCATGTTTTCTTGTCAGCACAAAACATGTTGTGGTATTTTCAATCATGAGTCATGTTTGAAAATACCTGATTACTTTAAGGTGAAACGAGTCATAACTGAAATACTCCTCCTATAATGCCCTTTAAGAAATGAATACTACTGGTACTACATTGTATACACTGTTGATATGTTATATAATATTACATAGCATGTGTGGTCAATATCAACATATTCCCTTtacacagtaaatgtaaaatgttattTTCATAAGTCATAGTATGAATGAGACAATAtagagtggtgtaaagtacttaaagtaaaaatactttaaagtactgcgttttggggggggtatctgtactttactattcatttttttgacaacttttacttttacttcactacattcataaagaaaataatgtactttttactccatacattatCTCTGACAACCAAacgtacttgttacattttgacagggaAATGGTCcagttcacacacttatcaaaagaaaatccctggtcatccctactgcctctgatctggcagactcacttaacacaaatgagtgttgtagtgtgcccctggctatctgtaaattaaaaaaTTTACAAAata
>TU260288
CGCCAATGGGTGGAATAGGGAGAGACCTGTTAGCGCATTCCGCCTCTCGCAGTTTCCCACGCCTCCTCGGGGTATAATGATAGTAGGCTACTCGAGTGCAGTAGAAAACCATCCGCATTGGCAGGcacatttttttttcaacttcACACGGTCTTTGGGGGATACCTCAGTAGACTGAGGCTGCAGTATTGAAAAGCCTATAACCGAATGCAGTGCCTGTGCATCACCACCAGAGGACCCCCCCATGCCTTCTAAGTGTTGGTGCAATTTACTTTATTGAGCCGCagttttctttcttttcttccaATCCTACTCCACACACCTCAAAAGTGCGCGTCTTCCCATTTTCTGTCCGCTGACCTGAAAACCTGCATCGGGGCGCAAGAGAGAGACTCAGCAGACAAAGACCCAGTATATCCAGACTGCAGTCATGGCAACTGAAAGAGAATCGATGTTTCATGATCAAAGTGACTTTGAATATGATTATGAGACACTTCGAACTACAGGGGTCATCATTGGTGTGATCTTGTTTGTGTCTGGTATCCTAATAGCTCTTAGTAAAAAACTCACATGCTCAAAATCGTCTTCCAAGTAAGAGTTTGTACAGGGCTTGGCAGTTGCTCCGCCTGTGCATGTGGAATGCATCAGTCTTTGGAAGAGGAGTCCCCACCAAATACAGGATGGCTTTACTAATACTATTTTACTGTTACCATGTCtgtcctttccccctctctcccctcccacagTGGAACCCATGTCTGAATGCTGCCTATTGGTTAAGATATTACAGTCCCGCACTCCCTCCCTAAATCCAACAACACTGCCCAGCCATTCAACCAACTAAGCAATCACCCTACAGAGCATCACATTACAGTCAAATGTCTCAAAATAGTCTAGTAGTCTAACTCTGTGACATTTTTGAAAATCAAGTGTTCTTGTCAACCAAGCAATATTAAGGAAATGTCTGCATTAGGACTTTTTTGGGGCCCCTAGTTGAGAATGGGGGCCGTTGTTGCATGGGTTGGCAGTGTGGGTGGATGGCCTCAAAGAGTGTATGTTTACAGCCAATGGCATGCCGACccagtctcttcctctcccctaaCCTTTGAGAGAGGACACCGATTGGGAAGATCCTGACATATCTCTGCATTTTGCCCCAAATTGAATCCTGTGATTGTCAAAACTTTGTGGCCCCAGCCCCTTCTGTGCATGGATACAGTTGACCTAATCCGTCTAAAATACCTTCTCTTTGGTCAGAACACACATGATCTTGGTTACATTGTGGTTGTTTCCACAAAGCTTTGAGGTGAACTGAACTGTCTAAACTATCCAGGATTGCTTCCTTTAATTTCATTTCTCTCCTTGTGTCAGAGTGAATAACTGTCTCCTCTTGTCTTCTCGTCTTCAGCTCTAATCCAGCAGGCACCCAAATACCAAAGACAGAGGTGCCTCCTCAAACAGTATAGATGAAGTGTGCATGGAGGCGAGGGAGAGTCATCATGGGAGGTGCTGCAGAGAGGCCAACACACATAataacacacactctcacatttATGGCTGCCACACACCAGCACCCATTGGAACATCAAGTATGGTGCACACCCAGCCCATGCTGACCAGAAGAATGACTGAATTGTCATTCTTgatttaaataaaatgtatatcaAGCCAAGATGAAGATGTTACTCTTAACCGTCTTTGTGACTTGTGTATTAGGTGCTATCAATCTACCTTGCCCAGGAGAGAATGTAAAGTAGCCTTCAGTGCTGATTTGGGGTTTATCCTTACCCCAACTGGCACCAAAAGCACCTAAAAGCAAAAAAACATACCTGGCGCAAGATCAGCTTTCAGGTGCACTGTAAATCTATATCATGATATGGGTAGTGTTGAAACAGAACTGAATGCTGTGCTCTCTCTGTTCCTTGCTTTTGACTTCATGCACACCCAAGAAAGTTGATTGCATGTCTCGTTTTACTGTATAGTACTCTCAATGCACTTTAGAAATCTACAACTTTATCATCCAGTCGTGATTTAGGATTTCACATTGGACCTGTATTATTAACCTCCAGCATGAATTAAGATATCAAACCAACCCCATTATCTCACTGTTTTACTGATGGTTGGCTCAGGATCTATCTGCTGTCATTTTTGATGGCATTAAGTGGACTGccgtgtgtggttgtgttctagGTAGCAATGAGAAGGATGTCAACCCCATGTCAGATGTTAATTTGAAACAGAAGCAGGAATGAAGTCTCCTGTCATTCTCTGGGGTCTGTAAGAGGGTGCCACCAGTATAGTATTGTATGTCAACAGCCTTTTTCTTTCTCCTATGGCATTTTAAGTTACATTGCACGAGTAGAATCATTCAAAGCACTAAAAAGGTATTACCTTGGGTGTGAAGGAGCGGGCATTTCAAAAGTGTATGAGTTTAAGCTTAACGAAAAGATCAATACATTAAGATAAGAAGTCATAGTAACTAGCTGCAAATAAAATGTCTGTATTATCATTATTTAGAGCTGTTTCTAACTTGCTGCAAGTACAATGTCTGTTATCTTCAGATATTTTTATTTACCGGTATGCAGCACTAGTAATGCCTGATCCTGAGCCAATGGCGTAACAGTTAACCAAAAGCAAATGAGTGATTCTCACCAGAGCTAACCAATAAGACAGCTGCTGCAATAAAAATCACCCTGTATACAATGGTCTTATTGATGTATTGTTTACAGTTATTTCCCATATCTTTTAATCTGAACTTTTATCAATACATACATGTGGATTAAAATAGAGTATAAAATAGATGACAAATAGAGATATTTGAAGAACAGATTTAATTccagggttaagtttaggcaatTCAGTTAATCAGAAGGATACATTCAGTGAAAAGTAACAGGAGTATTACACTGTTACAAACTGTCAAAGTAGACCCAAGCAGCCAAAATCACCAGATTCTCTCGTACCATTTTTTTAACGATAACATCAGTTATTCTCCCTCATGTTAACTCACCTATGATTTAGACCTAGGAACACATAAAGACATCTCTTTATGTTCCTTGACTAAGACTGCCCAGGTTCCAAAACTAGGGGAAATCACAGTCAAGTCTGGGGAAATGTTGTGTCATATCTCCAATGAGATGTTttattttgttgtattttctaTGCCACTTACACTTATGAAGTGGTATATTCACTACAGCAATATTTCAAAGGGCACATGCATGCTACCTCAttggagatttttttttaaaacagtcaTAAAAGGTATATGAGTAAGTGATGCATGTTTTCTTGTCAGCACAAAACATGTTGTGGTATTTTCAATCATGAGTCATGTTTGAAAATACCTGATTACTTTAAGGTGAAACGAGTCATAACTGAAATACTCCTCCTATAATGCCCTTTAAGAAATGAATACTACTGGTACTACATTGTATACACTGTTGATATGTTATATAATATTACATAGCATGTGTGGTCAATATCAACATATTCCCTTtacacagtaaatgtaaaatgttattTTCATAAGTCATAGTATGAATGAGACAATAtagagtggtgtaaagtacttaaagtaaaaatactttaaagtactgcgttttggggggggtatctgtactttactattcatttttttgacaacttttacttttacttcactacattcataaagaaaataatgtactttttactccatacattatCTCTGACAACCAAacgtacttgttacattttgacagggaAATGGTCcagttcacacacttatcaaaagaaaatccctggtcatccctactgcctctgatctggcagactcacttaacacaaatgagtgttgtagtgtgcccctggctatctgtaaattaaaaaaTTTACAAAata

Function

symbol description
fxyd7 Predicted to enable sodium channel regulator activity. Predicted to be involved in regulation of sodium ion transmembrane transporter activity. Predicted to act upstream of or within ion transport and regulation of ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane.

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005041175.1 False 2111 mRNA 0.42 2 15098865 15101053
TU260287 False 3065 lncRNA 0.39 6 15096725 15102227
TU260288 True 3882 lncRNA 0.40 5 15096725 15102227

Neighbor

gene id symbol gene type direction distance location
LOC110511049 LOC106605627 coding upstream 2952 15072005 ~ 15095913 (+)
LOC118944484 NA coding upstream 32542 15064079 ~ 15066323 (+)
LOC110511152 NA coding upstream 37601 15055830 ~ 15061264 (+)
LOC110510993 fxyd5a coding upstream 76287 14998676 ~ 15022578 (+)
LOC110510950 LOC106605624 coding upstream 107471 14984771 ~ 14991394 (+)
tyrobp tyrobp coding downstream 14804 15115857 ~ 15132280 (+)
LOC118944490 LOC106578274 coding downstream 35719 15136772 ~ 15138356 (+)
LOC118944493 LOC106578274 coding downstream 37505 15138558 ~ 15141461 (+)
LOC110519918 LOC106578256 coding downstream 103474 15204527 ~ 15212699 (+)
LOC110519916 LOC106577754 coding downstream 148841 15249894 ~ 15271273 (+)
G227492 NA non-coding upstream 53611 15044947 ~ 15045254 (+)
G227489 NA non-coding upstream 54912 15043663 ~ 15043953 (+)
LOC118944476 LOC106605624 non-coding upstream 115810 14942150 ~ 14984145 (+)
G227369 NA non-coding upstream 171117 14927508 ~ 14927748 (+)
G227354 NA non-coding upstream 182564 14916052 ~ 14916301 (+)
G227569 NA non-coding downstream 46714 15147767 ~ 15147995 (+)
G227570 NA non-coding downstream 47028 15148081 ~ 15148286 (+)
G227573 NA non-coding downstream 50295 15151348 ~ 15151581 (+)
G227580 NA non-coding downstream 80818 15181871 ~ 15182514 (+)
G227405 NA other upstream 100790 14997159 ~ 14998075 (+)
G226941 NA other upstream 394890 14703601 ~ 14703975 (+)
G227606 NA other downstream 142893 15243946 ~ 15244282 (+)
zgc:162160 LOC106605640 other downstream 587290 15672260 ~ 15697397 (+)
LOC118944532 NA other downstream 1412450 16477925 ~ 16515897 (+)
LOC110503770 LOC106605493 other downstream 1542298 16619192 ~ 16674738 (+)
LOC100653482 mrap2 other downstream 1693646 16794699 ~ 16801793 (+)

Expression


Co-expression Network