plm (plm)


Basic Information

Item Value
gene id plm
gene name plm
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 15158002 ~ 15171917 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021596779.2
TTCAAGCTGAGCAAACCTGTTGAGCCTCAGTGAAAAAAGGGTGTTGGCGACTGTCTGATTTAAGAGTACGTTCGTCTATTGTGTGTCGCTCCATGCCCGACATTTCCTGGTTTTCCCCCTACACACATCTCCATTTGGGTTTAACGCGTGTCGGAGGTGAAAGAGAGTTTGAAGATGGCAAATATCTCTGCTTTGCTTTTATTGACATTTGCGTCCCTTGTGTTCGCAGAGGAGCAGAAAGAAATGGAGGAGGATGATCCATTTACCTTTGatTATCACAGGCTACGTGTTGGGGGGTTGATCCTGGCAGCAGTTCTGTGTCTGATCGGCATCACCATCCTCTTCAGCGGACACTGCAGATGCAAGTTCAACCAGGACAAAAGGAGGAGGTCAGGAAGCAACGCTGCCCAGCCACTCAACGACCAAGCTCGGGCCAGTGAGTGCTAGGAACCAAATGCCCACCTGGCAGCAGGTCAAATCGACTTCCTGGTTCTGCATCAATCAAGAGATAAAAATTGATGGGTGGAGTTGGCCTGTTTTTTGTCTGATGGAGGTTGTTTTTTAGAGAGTGGTGCTGTCCTCCCCAGAGGGAGGTGGTACTGTGCCATTGGAGATCAGAGGTGTGCTGCTTTTACCTGTGTTGCTGTTTTCCATTCCGCCCATTACTCCTGTTTCTGCTCCGCCCAATATTCACACTGTAACTCGCCACCAgcaagcacacacagacagacaaagcagGACACGATTTTTCCCCCATGTTCTTTGTATTTAAACAAATAACCAAATGATGCTGTGTGTCGATTCACTCATTATTTCATTGCAATGTTTTTCACCTTTAGTGACTCCAACTGTATGTGGAAATTATGTGGTAGATTTGACTGTTGGTGTGCGTTTTGAATTGCCATACTGTCCCCTAATAATCTTTCATGCATATACTTTACTGTAAAATAGGTACCGGTAGCCATAAACTATTATAATGTCAATAACTATTCACACACCTTTATCTTGATTATTCCTATATTAACTTTTTAGTTGAATGTAGAAAAGTGCACTGGTCTATGCAGAAGAATCTGTTGTATGATAAATGCAAGGTTTTTTAATAatacagaatgttaaaattatttCAATAAGCGGATGATATAGTCTTGTTTGAGAGTGTTTGCCACCAAAACAAAATGCATGTTATTTTAGTTTGCTAGATACCACTCAAACAATTACAGTCCCTGAAGAgggttttctccccaattggctTTTAATGAGTCACGTCTAAATTGAGATGTCTCTTGCCAAATGAATAGATGGTGTCTATGTTTGTAATTCAAATTAAAAGAGTTACCTTTTA
>XM_021596777.2
TTTCAAGCTGAGCAAACCTGTTGAGCCTCAGTGAAAAAAGGGTGTTGGCGACTGTCTGATTTAAGAGTACGTTCGTCTATTGTGTGTCGCTCCATGCCCGACATTTCCTGGTTTTCCCCCTACACACATCTCCATTTGGGTTTAACGCGTGTCGGAGCAGTTGCGTCCCTTGTGTTCGCAGAGGAGCAGAAAGAAATGGAGGAGGATGATCCATTTACCTTTGatTATCACAGGCTACGTGTTGGGGGGTTGATCCTGGCAGCAGTTCTGTGTCTGATCGGCATCACCATCCTCTTCAGCGGACACTGCAGATGCAAGTTCAACCAGGACAAAAGGAGGAGGTCAGGAAGCAACGCTGCCCAGCCACTCAACGACCAAGCTCGGGCCAGTGAGTGCTAGGAACCAAATGCCCACCTGGCAGCAGGTCAAATCGACTTCCTGGTTCTGCATCAATCAAGAGATAAAAATTGATGGGTGGAGTTGGCCTGTTTTTTGTCTGATGGAGGTTGTTTTTTAGAGAGTGGTGCTGTCCTCCCCAGAGGGAGGTGGTACTGTGCCATTGGAGATCAGAGGTGTGCTGCTTTTACCTGTGTTGCTGTTTTCCATTCCGCCCATTACTCCTGTTTCTGCTCCGCCCAATATTCACACTGTAACTCGCCACCAgcaagcacacacagacagacaaagcagGACACGATTTTTCCCCCATGTTCTTTGTATTTAAACAAATAACCAAATGATGCTGTGTGTCGATTCACTCATTATTTCATTGCAATGTTTTTCACCTTTAGTGACTCCAACTGTATGTGGAAATTATGTGGTAGATTTGACTGTTGGTGTGCGTTTTGAATTGCCATACTGTCCCCTAATAATCTTTCATGCATATACTTTACTGTAAAATAGGTACCGGTAGCCATAAACTATTATAATGTCAATAACTATTCACACACCTTTATCTTGATTATTCCTATATTAACTTTTTAGTTGAATGTAGAAAAGTGCACTGGTCTATGCAGAAGAATCTGTTGTATGATAAATGCAAGGTTTTTTAATAatacagaatgttaaaattatttCAATAAGCGGATGATATAGTCTTGTTTGAGAGTGTTTGCCACCAAAACAAAATGCATGTTATTTTAGTTTGCTAGATACCACTCAAACAATTACAGTCCCTGAAGAgggttttctccccaattggctTTTAATGAGTCACGTCTAAATTGAGATGTCTCTTGCCAAATGAATAGATGGTGTCTATGTTTGTAATTCAAATTAAAAGAGTTACCTTTTA
>NM_001165198.2
ACACACATCTCCATTTGGGTTTAACGCGTGTCGGAGGTGAAAGAGAGTTTGAAGATGGCAAATATCTCTGCTTTGCTTTTATTGACATCAGTTGCGTCCCTTGTGTTCGCAGAGGAGCAGAAAGAAATGGAGGAGGATGATCCATTTACCTTTGatTATCACAGGCTACGTGTTGGGGGGTTGATCCTGGCAGCAGTTCTGTGTCTGATCGGCATCACCATCCTCTTCAGCGGACACTGCAGATGCAAGTTCAACCAGGACAAAAGGAGGAGGTCAGGAAGCAACGCTGCCCAGCCACTCAACGACCAAGCTCGGGCCAGTGAGTGCTAGGAACCAAATGCCCACCTGGCAGCAGGTCAAATCGACTTCCTGGTTCTGCATCAATCAAGAGATAAAAATTGATGGGTGGAGTTGGCCTGTTTTTTGTCTGATGGAGGTTGTTTTTTAGAGAGTGGTGCTGTCCTCCCCAGAGGGAGGTGGTACTGTGCCATTGGAGATCAGAGGTGTGCTGCTTTTACCTGTGTTGCTGTTTTCCATTCCGCCCATTACTCCTGTTTCTGCTCCGCCCAATATTCACACTGTAACTCGCCACCAgcaagcacacacagacagacaaagcagGACACGATTTTTCCCCCATGTTCTTTGTATTTAAACAAATAACCAAATGATGCTGTGTGTCGATTCACTCATTATTTCATTGCAATGTTTTTCACCTTTAGTGACTCCAACTGTATGTGGAAATTATGTGGTAGATTTGACTGTTGGTGTGCGTTTTGAATTGCCATACTGTCCCCTAATAATCTTTCATGCATATACTTTACTGTAAAATAGGTACCGGTAGCCATAAACTATTATAATGTCAATAACTATTCACACACCTTTATCTTGATTATTCCTATATTAACTTTTTAGTTGAATGTAGAAAAGTGCACTGGTCTATGCAGAAGAATCTGTTGTATGATAAATGCAAGGTTTTTTAATAatacagaatgttaaaattatttCAATAAGCGGATGATATAGTCTTGTTTGAGAGTGTTTGCCACCAAAACAAAATGCATGTTATTTTAGTTTGCTAGATACCACTCAAACAATTACAGTCCCTGAAGAgggttttctccccaattggctTTTAATGAGTCACGTCTAAATTGAGATGTCTCTTGCCAAATGAATAGATGGTGTCTATGTTTGTAATTCAAATTAAAAGAGTTACCTTTT
>TU260418
AACCTGTTGAGCCTCAGTGAAAAAAGGGTGTTGGCGACTGTCTGATTTAAGAGTACGTTCGTCTATTGTGTGTCGCTCCATGCCCGACATTTCCTGGTTTTCCCCCTACACACATCTCCATTTGGGTTTAACGCGTGTCGGAGGTGAAAGAGAGTTTGAAGATGGCAAATATCTCTGCTTTGCTTTTATTGACATTTGCGTCCCTTGTGTTCGCAGAGGAGCAGAAAGAAATGGAGGAGGATGATCCATTTACCTTTGatTATCACAGGCTACGTGTTGGGGGGTTGATCCTGGCAGCAGTTCTGTGTCTGATCGGCATCACCATCCTCTTCAGCGGACACTGCAGATGCAAGTTCAACCAGGACAAAAGGAGGAGGTCAGGAAGCAACGCTGCCCAGCCACTCAACGACCAAGCTCGGGCCAGTGAGTGCTAGGAACCAAATGCCCACCTGGCAGCAGGTCAAATCGACTTCCTGGTTCTGCATCAATCAAGAGATAAAAATTGATGGGTGGAGTTGGCCTGTTTTTTGTCTGATGGAGGTTGTTTTTTAGAGAGTGGTGCTGTCCTCCCCAGAGGGAGGTGGTACTGTGCCATTGGAGATCAGAGGTGTGCTGCTTTTACCTGTGTTGCTGTTTTCCATTCCGCCCATTACTCCTGTTTCTGCTCCGCCCAATATTCACACTGTAACTCGCCACCAgcaagcacacacagacagacaaagcagGACACGATTTTTCCCCCATGTTCTTTGTATTTAAACAAATAACCAAATGATGCTGTGTGTCGATTCACTCATTATTTCATTGCAATGTTTTTCACCTTTAGTGACTCCAACTGTATGTGGAAATTATGTGGTAGATTTGACTGTTGGTGTGCGTTTTGAATTGCCATACTGTCCCCTAATAATCTTTCATGCATATACTTTACTGTAAAATAGGTACCGGTAGCCATAAACTATTATAATGTCAATAACTATTCACACACCTTTATCTTGATTATTCCTATATTAACTTTTTAGTTGAATGTAGAAAAGTGCACTGGTCTATGCAGAAGAATCTGTTGTATGATAAATGCAAGGTTTTTTAATAatacagaatgttaaaattatttCAATAAGCGGATGATATAGTCTTGTTTGAGAGTGTTTGCCACCAAAACAAAATGCATGTTATTTTAGTTTGCTAGATACCACTCAAACAATTACAGTCCCTGAAGAgggttttctccccaattggctTTTAATGAGTCACGTCTAAATTGAGATGTCTCTTGCCAAATGAATAGATGGTGTCTATGTTTGTAATTCAAATTAAAAGAGTTACCTTTTATGACCGTGTCCAATGTTACATTACATAATATTAATAGATGCTGGATCTCAAAAATAAAACAAGTCTCTGATAGGCTCCTCAAATGTAAATACTGCAAATACTTTTCTCTTTTTGACGTAAGGCCCATGTCCTGAGTGGTTCAAAGCTACTTATACATCGCCATCTACTGGATTGCATGAGACACTGCAAAAATTCTGGTACAGTGTTTCTCAAACCCTTAATTAAAAGCATTTTTTGGAACAGTATTTTTCACAAGACACTAAACTCCGTGACCTTTGAATAGCAGtaaatgcatttttttaaatgtagttgCCTTCTCAAAACATTAATACATTCATCAAAACTACACTGACTGtataaacattaggaatacccgCTCTTTCCAgccggcaggtatcctagtgctTAGATCGTTGGACTAGTTACTGAAAGGTCGCAAATTCAAATCCTCGAGCTGGCAAagtaaacatctgtcattctgcccctgaacaaggcagttaacactgttcctaggctgtcattgtaaataagaatttgttcttaaccaagttaaatgaaggttcaaattaaataaaacatttccatgaaat
>TU260419
AACCTGTTGAGCCTCAGTGAAAAAAGGGTGTTGGCGACTGTCTGATTTAAGAGTACGTTCGTCTATTGTGTGTCGCTCCATGCCCGACATTTCCTGGTTTTCCCCCTACACACATCTCCATTTGGGTTTAACGCGTGTCGGAGGTGAAAGAGAGTTTGAAGATGGCAAATATCTCTGCTTTGCTTTTATTGACATCAGTTGCGTCCCTTGTGTTCGCAGAGGAGCAGAAAGAAATGGAGGAGGATGATCCATTTACCTTTGatTATCACAGGCTACGTGTTGGGGGGTTGATCCTGGCAGCAGTTCTGTGTCTGATCGGCATCACCATCCTCTTCAGCGGACACTGCAGATGCAAGTTCAACCAGGACAAAAGGAGGAGGTCAGGAAGCAACGCTGCCCAGCCACTCAACGACCAAGCTCGGGCCAGTGAGTGCTAGGAACCAAATGCCCACCTGGCAGCAGGTCAAATCGACTTCCTGGTTCTGCATCAATCAAGAGATAAAAATTGATGGGTGGAGTTGGCCTGTTTTTTGTCTGATGGAGGTTGTTTTTTAGAGAGTGGTGCTGTCCTCCCCAGAGGGAGGTGGTACTGTGCCATTGGAGATCAGAGGTGTGCTGCTTTTACCTGTGTTGCTGTTTTCCATTCCGCCCATTACTCCTGTTTCTGCTCCGCCCAATATTCACACTGTAACTCGCCACCAgcaagcacacacagacagacaaagcagGACACGATTTTTCCCCCATGTTCTTTGTATTTAAACAAATAACCAAATGATGCTGTGTGTCGATTCACTCATTATTTCATTGCAATGTTTTTCACCTTTAGTGACTCCAACTGTATGTGGAAATTATGTGGTAGATTTGACTGTTGGTGTGCGTTTTGAATTGCCATACTGTCCCCTAATAATCTTTCATGCATATACTTTACTGTAAAATAGGTACCGGTAGCCATAAACTATTATAATGTCAATAACTATTCACACACCTTTATCTTGATTATTCCTATATTAACTTTTTAGTTGAATGTAGAAAAGTGCACTGGTCTATGCAGAAGAATCTGTTGTATGATAAATGCAAGGTTTTTTAATAatacagaatgttaaaattatttCAATAAGCGGATGATATAGTCTTGTTTGAGAGTGTTTGCCACCAAAACAAAATGCATGTTATTTTAGTTTGCTAGATACCACTCAAACAATTACAGTCCCTGAAGAgggttttctccccaattggctTTTAATGAGTCACGTCTAAATTGAGATGTCTCTTGCCAAATGAATAGATGGTGTCTATGTTTGTAATTCAAATTAAAAGAGTTACCTTTTATGACCGTGTCCAATGTTACATTACATAATATTAATAGATGCTGGATCTCAAAAATAAAACAAGTCTCTGATAGGCTCCTCAAATGTAAATACTGCAAATACTTTTCTCTTTTTGACGTAAGGCCCATGTCCTGAGTGGTTCAAAGCTACTTATACATCGCCATCTACTGGATTGCATGAGACACTGCAAAAATTCTGGTACAGTGTTTCTCAAACCCTTAATTAAAAGCATTTTTTGGAACAGTATTTTTCACAAGACACTAAACTCCGTGACCTTTGAATAGCAGtaaatgcatttttttaaatgtagttgCCTTCTCAAAACATTAATACATTCATCAAAACTACACTGACTGtataaacattaggaatacccgCTCTTTCCAgccggcaggtatcctagtgctTAGATCGTTGGACTAGTTACTGAAAGGTCGCAAATTCAAATCCTCGAGCTGGCAAagtaaacatctgtcattctgcccctgaacaaggcagttaacactgttcctaggctgtcattgtaaataagaatttgttcttaaccaagttaaatgaaggttcaaattaaataaaacatttccatgaaat

Function

symbol description
plm FXYD domain-containing ion transport regulator 1

NR:

description
phospholemman precursor

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0016020 membrane cellular_component
GO:0005216 ion channel activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021596779.2 False 1342 mRNA 0.42 8 15158592 15171916
XM_021596777.2 False 1294 mRNA 0.42 7 15158592 15171917
NM_001165198.2 False 1224 mRNA 0.41 8 15158593 15171796
TU260418 False 1919 lncRNA 0.40 8 15158002 15171903
TU260419 True 1922 lncRNA 0.46 8 15158002 15171903

Neighbor

gene id symbol gene type direction distance location
LOC110511165 NA coding downstream 42751 15112835 ~ 15115841 (-)
LOC118936618 LOC106605662 coding downstream 48661 15102353 ~ 15109931 (-)
si:dkey-262k9.2 LOC106577773 coding downstream 117699 15023525 ~ 15040893 (-)
LOC110510856 LOC106577793 coding downstream 324561 14780067 ~ 14834031 (-)
aplp1 LOC106577862 coding downstream 415693 14694606 ~ 14742899 (-)
LOC110519917 LOC106577761 coding upstream 12901 15184818 ~ 15204146 (-)
LOC110519925 LOC106578249 coding upstream 45074 15216991 ~ 15230487 (-)
si:dkey-65b12.6 LOC106577653 coding upstream 225756 15397673 ~ 15406356 (-)
LOC110519926 LOC106577653 coding upstream 268817 15440734 ~ 15470012 (-)
LOC110512370 NA coding upstream 344282 15516199 ~ 15525808 (-)
G227438 fxyd5a non-coding downstream 136017 15004287 ~ 15022575 (-)
G227476 NA non-coding downstream 160191 14997217 ~ 14998401 (-)
G227472 LOC106605624 non-coding downstream 167186 14990463 ~ 14991406 (-)
G227340 NA non-coding downstream 258453 14899834 ~ 14900139 (-)
G227331 NA non-coding downstream 264047 14894249 ~ 14894545 (-)
G227717 LOC105030512 non-coding upstream 22280 15194197 ~ 15216186 (-)
G227732 NA non-coding upstream 53909 15225826 ~ 15226093 (-)
G227741 NA non-coding upstream 71035 15242952 ~ 15243191 (-)
G227742 NA non-coding upstream 72104 15244021 ~ 15244286 (-)
G227744 NA non-coding upstream 74395 15246312 ~ 15246517 (-)
LOC110503689 tm149 other downstream 521882 14598789 ~ 14638314 (-)
psenen LOC106577931 other downstream 633738 14519197 ~ 14524902 (-)
G227060 NA other downstream 683426 14428793 ~ 14475166 (-)
LOC110538195 LOC106578103 other downstream 1156784 13995196 ~ 14023153 (-)
wu:fe05a04 LOC106578221 other downstream 1230759 13909746 ~ 13927861 (-)
LOC110512327 LOC106578554 other upstream 364448 15536363 ~ 15539677 (-)
G228094 NA other upstream 429098 15601015 ~ 15601488 (-)
G228098 fbrl other upstream 534317 15706234 ~ 15708265 (-)
G228191 LOC106578455 other upstream 615705 15762029 ~ 15791401 (-)
G229373 LOC100194703 other upstream 1667472 16839389 ~ 16839839 (-)

Expression


Co-expression Network