XLOC_021606 (CR788311.1)



Basic Information


Item Value
gene id XLOC_021606
gene name CR788311.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 19051485 ~ 19066987 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00042882
GAGCATCTCAAAGGTGTGTGTTTCGATGCCTAAGAGGAGATAAATGAAGAAAAGGCTTACCTAGCGCCACTTGACAAGCCTTGCGCAGCTGGTTGTGCTGGCTCCGCTTCACCTCTTTATCCGCGAGGATTTTCTCCAGCGCCCGAGACAGAAACATGCTCTTGGTGCTCAGGCTTTCTGTCTGCGTATGCCGTCGATGTGTTGCCAGCGCTTCCTGTTCTTTCATCTCTCGCTCGACGTGATTTTAGTGGTCCGTCAGGCCGTCATCGCTGGCCCGTTCCCTGCGGTTTGGCAGGGGCGTGAAGGTGCCAGAAGGGGCCGATGTTGTCGCTGGTTCCGTCGGGGCCAGTTGGACGCTGCTCTCTCAGCACTGCGTCGCCATGTTGGCCGCACGTCACGTCACGTGATTCGCGGGCGCTTACACTGATGTGTACATCCAGAACACGACTTGGTGGAGGTGGAGATGAATGGAGGATTACGCCTTTCGTGGGCGTTCAGAGACCCTACGCTTGTGCTGGTCGCCATTGTACCGTTTGAGGGCCGTAGGTCGAGGTGAGGCTCGTATCTGGGCAGAACAGGCATGCTGGAGCTGGCGGTCGCTCGAACCTTTGCTGGCGGGATGAGTTTGGCCCCTCTATCCGCCTCGATCACCAGATCCTCCTCGTCCTCACTCTCTTCATCCGGCTCAAAGTTCTGTATAATATGAGAAGGAGTCATGGACGTGGAGCCTGGC

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094757

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00042882 True 733 lncRNA 0.57 2 19051485 19066987

Neighbor


gene id symbol gene type direction distance location
XLOC_021605 cox4i2 coding upstream 100337 18944388 ~ 18951148 (+)
XLOC_021604 NA coding upstream 122483 18924470 ~ 18929002 (+)
XLOC_021603 emp3b coding upstream 256924 18779043 ~ 18794561 (+)
XLOC_021601 myh7bb coding upstream 294407 18722715 ~ 18757078 (+)
XLOC_021602 CR847953.2 coding upstream 320086 18731322 ~ 18731399 (+)
XLOC_021607 NA coding downstream 38559 19105546 ~ 19119443 (+)
XLOC_021608 CR388168.2 coding downstream 110904 19177891 ~ 19182388 (+)
XLOC_021609 si:dkey-93l1.4 coding downstream 115832 19182819 ~ 19187816 (+)
XLOC_021610 ccdc115 coding downstream 131257 19198244 ~ 19201328 (+)
XLOC_021611 si:dkey-109j17.5 coding downstream 135649 19202636 ~ 19206419 (+)
XLOC_021600 NA non-coding upstream 360003 18688354 ~ 18691482 (+)
XLOC_021598 CR339055.1 non-coding upstream 762284 18289074 ~ 18289201 (+)
XLOC_021597 NA non-coding upstream 915191 18134466 ~ 18136294 (+)
XLOC_021613 CR388168.1 non-coding downstream 150541 19217528 ~ 19218940 (+)
XLOC_021614 NA non-coding downstream 406409 19473396 ~ 19476151 (+)
XLOC_021627 AL953864.1 non-coding downstream 1120638 20187625 ~ 20187739 (+)

Expression



Co-expression Network