ppox (LOC106605668)


Basic Information

Item Value
gene id ppox
gene name LOC106605668
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 15636736 ~ 15644078 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021592753.2
ATACAGAAAACAGAAAGAACAAGCAAAGGATTTCCAGCAAAAAAGACGAAATCGGTGATTGTAATTGGTTGTTCAAAGCAGCGACGAAGTCCTCTGTCATCAACGTTATGTCACGGAGGTTCATATGAGTCGTGACTCCAACTTTAGACCGCACAAGAGCTGGGCATCGTAGGGCTAAATGCAGAAGACAGTGGCTGTCCTGGGAGGGGGGATCGGGGGCTTGTCAGCCTGCTTCCACCTCAGCAAGAGCCCCCAGGTCTCCAAGATAGTCCTGCTGGAGAGGGCTGGACGGTTCGGAGGCTGGCTAAGCTCAACTCGTAGGGAGGATGGAGCTGTGTTTGAACATGGACCCAGAGGGATTCGACCTGCAGGAGCCGTGGGACGAAACACACTCAACATGGTGGAAGAGTTGGGGCTGGAGAGCGAGGTCCTCCCAGTCACCTATGATCACGTGGCCTCTAAGAACCGTTACCTCTACGTGGGAGGCCAGCTACACAAGATGCCTTCTGGCTTAGGtgGAGTAGTGCGTACAGTCCCTCCGTTCTCTCGTCCTCTGGTCCAGAGCGTACTGAAGGAGATACTGATcagcagaggaaaggaggaggatgaGTCTGTTCATTCCTTCGTGTCGAGAAGGCTGGGCactgagcTTGCAGACATTGCCATCGACAGCCTGTGCAGGGGAGTGTTTGCAGGGGACTGCAGGAAGCTGAGTGTGCGCTCTTGTCTCCCACCACTCTACAACGCAGAGAAGGCCAGAGGTTCCATCGTCCTGGGGATGTTGCTGGGCTCAGGCCCTGAACCAGACGTACCCCCCTCTACCCTGGCCAAGAGGGCCGCTCAGGAGAACTGGGCCCAGTGGTCACTGAAGAGGGGCTtacagaaccttccagaagccctggaggagaggatgaggaatgGGGGACGTGTAGAGGTGCACAAAGACACCCCTGTGATGGGGCTAAGTACTAATGGGACTGGCTGGGAGATTCAACTGGAGGTCGGCACCATCAAAGCTGATCATATCATTTCTGCTCTACCCGCAAAAGCTCTGGCCTCAGCACTGCCCTCTGCTGCACAGCCCCTGTCACAGCAGCTACTGGAGATCGCCACAGTGACCGTTGCCGTGGTAAACCTGGAGTACGAGGGTTCCGTCCTGCCTGTCACTGGCTTTGGCCACCTGGTGCCATCCTCAGAAGACAGAGGTCTCCTAGGGGTGGTCTATGACTCTGTGCCCTTCCCCCAGCACAACCGCACTGGAGGACACACCACCAGACTAACAGTGATGATGGGCGGGGCCTGGTTCCAGGAAGTGTTTGGGAATCCAGAGAAAGTGACTGAGCAGCTCCTCCTGGATAGGGCTACCCAGGCCGTGACATCACACCTGGGCGTTACCACACCACCTATCTGGAGCATTGTTGCATTACTCaagGACTGCATTCCTCAATATTACCTTGGACACTGGAAACGACTTGAAAATATGAGACAGTACATCAGAGACCACAATCTACCCCTTAGTTTGGCTGGGTCCTCTTATGATGGCGTCTCGGTCAATGATGTCATCTTCAGTGGACGGATGGCAGCAGAGGGCCTTGTGGGAAAAGTCTAACCAGACGTTCAGGTTCCAACCATGGATATAAGCTTATATTGTTAAGAGatcttgttttttttccccccaatcGCATTGCGTTCTACATTTAGTTTTGGTTTTACACAACTGTAtcaccggccatgattgggagtcccatagggcggcgcacaattggcccagcgtcgtccgggtttggccatcattgtaaataagaatttgtccttaactgacttgcctagttaaataaaggttaaataaaaatactaatAAAATGTACATACAACTTACTAGTCACCCTCTGCATTTAAGCCCTCTGCAAAGGGATGTCATTTTCACGCAATATCCTTGATTTATAAGCAGCATATTTACGAAGTTTTCCATTTCTATCTCATTTCGACAAAGTACAGCTTGAACCTCGAGATGATTCTATCAGAAACAAAACTCTGTCTGAGACATCACCACTAGCCTGGAAATCACAGGTAACCCACAGAACAGTTCTCGTTCTTATAAAATATTGTTTTTGAAATAAAGGGCTGAATGAAGTCATATGTAGTCACTACGTAAAAGGGAACCACAATCTGAACTGTTTTAGGGTGATCTGTCCCCAAAAGCTTACTTCAAGGATTTCATTTTCAGAATGTAGATgtaacattttaaattcaggatgaGATTTCATCTTTTAGTTATGGTGCCTTTTTGCTAACAGAAATCACCGCCCCTTCATGAATGTACAGGCATATTTGATGTGGGAGACATGTAAATGATGTGATAATCAGTGGTGTGTATATCCCTACTCTAACTGTACTTTGCAGCCATCTATTTTTTACCCTATCCTCTCTGAATATAGCAGACAAAAATctattattaatattatggtAAAGTATGTGCGCTGATGTTTCATCACCGTGGTAACAGAACCACACACACTGATGTGATGATCTCGATATGGTGATCTATCATGTATTTGGAATCTAATTACCATAAAGGAAACTTTTAATTTATAGAGTGCACGTACCGTGGCAAGTGGATGGCTTGATAATGTATTTTTATACACATTTGTTAAATGAAACTTTATTATTTGGAGAATGTTGCAGAGCAATAAATATGATGCTTTATCATCTTTTTGTCTA
>XM_036970346.1
ATACAGAAAACAGAAAGAACAAGCAAAGGATTTCCAGCAAAAAAGACGAAATCGGTGATTGTAATTGGTTGTTCAAAGCAGCGACGAAGTCCTCTGTCATCAACGTTATGTCACGGAGGTTCATATGAGTCGTGACTCCAACTTTAGACCGCACAAGAGCTGGGCATCGTAGGGCTAAATGCAGAAGACAGTGGCTGTCCTGGGAGGGGGGATCGGGGGCTTGTCAGCCTGCTTCCACCTCAGCAAGAGCCCCCAGGTCTCCAAGATAGTCCTGCTGGAGAGGGCTGGACGGTTCGGAGGCTGGCTAAGCTCAACTCGTAGGGAGGATGGAGCTGTGTTTGAACATGGACCCAGAGGGATTCGACCTGCAGGAGCCGTGGGACGAAACACACTCAACATGGTGGAAGAGTTGGGGCTGGAGAGCGAGGTCCTCCCAGTCACCTATGATCACGTGGCCTCTAAGAACCGTTACCTCTACGTGGGAGGCCAGCTACACAAGATGCCTTCTGGCTTAGGtgGAGTAGTGCGTACAGTCCCTCCGTTCTCTCGTCCTCTGGTCCAGAGCGTACTGAAGGAGATACTGATcagcagaggaaaggaggaggatgaGTCTGTTCATTCCTTCGTGTCGAGAAGGCTGGGCactgagcTTGCAGACATTGCCATCGACAGCCTGTGCAGGGGAGTGTTTGCAGGGGACTGCAGGAAGCTGAGTGTGCGCTCTTGTCTCCCACCACTCTACAACGCAGAGAAGGCCAGAGGTTCCATCGTCCTGGGGATGTTGCTGGGCTCAGGCCCTGAACCAGACGTACCCCCCTCTACCCTGGCCAAGAGGGCCGCTCAGGAGAACTGGGCCCAGTGGTCACTGAAGAGGGGCTtacagaaccttccagaagccctggaggagaggatgaggaatgGGGGACGTGTAGAGATTCAACTGGAGGTCGGCACCATCAAAGCTGATCATATCATTTCTGCTCTACCCGCAAAAGCTCTGGCCTCAGCACTGCCCTCTGCTGCACAGCCCCTGTCACAGCAGCTACTGGAGATCGCCACAGTGACCGTTGCCGTGGTAAACCTGGAGTACGAGGGTTCCGTCCTGCCTGTCACTGGCTTTGGCCACCTGGTGCCATCCTCAGAAGACAGAGGTCTCCTAGGGGTGGTCTATGACTCTGTGCCCTTCCCCCAGCACAACCGCACTGGAGGACACACCACCAGACTAACAGTGATGATGGGCGGGGCCTGGTTCCAGGAAGTGTTTGGGAATCCAGAGAAAGTGACTGAGCAGCTCCTCCTGGATAGGGCTACCCAGGCCGTGACATCACACCTGGGCGTTACCACACCACCTATCTGGAGCATTGTTGCATTACTCaagGACTGCATTCCTCAATATTACCTTGGACACTGGAAACGACTTGAAAATATGAGACAGTACATCAGAGACCACAATCTACCCCTTAGTTTGGCTGGGTCCTCTTATGATGGCGTCTCGGTCAATGATGTCATCTTCAGTGGACGGATGGCAGCAGAGGGCCTTGTGGGAAAAGTCTAACCAGACGTTCAGGTTCCAACCATGGATATAAGCTTATATTGTTAAGAGatcttgttttttttccccccaatcGCATTGCGTTCTACATTTAGTTTTGGTTTTACACAACTGTAtcaccggccatgattgggagtcccatagggcggcgcacaattggcccagcgtcgtccgggtttggccatcattgtaaataagaatttgtccttaactgacttgcctagttaaataaaggttaaataaaaatactaatAAAATGTACATACAACTTACTAGTCACCCTCTGCATTTAAGCCCTCTGCAAAGGGATGTCATTTTCACGCAATATCCTTGATTTATAAGCAGCATATTTACGAAGTTTTCCATTTCTATCTCATTTCGACAAAGTACAGCTTGAACCTCGAGATGATTCTATCAGAAACAAAACTCTGTCTGAGACATCACCACTAGCCTGGAAATCACAGGTAACCCACAGAACAGTTCTCGTTCTTATAAAATATTGTTTTTGAAATAAAGGGCTGAATGAAGTCATATGTAGTCACTACGTAAAAGGGAACCACAATCTGAACTGTTTTAGGGTGATCTGTCCCCAAAAGCTTACTTCAAGGATTTCATTTTCAGAATGTAGATgtaacattttaaattcaggatgaGATTTCATCTTTTAGTTATGGTGCCTTTTTGCTAACAGAAATCACCGCCCCTTCATGAATGTACAGGCATATTTGATGTGGGAGACATGTAAATGATGTGATAATCAGTGGTGTGTATATCCCTACTCTAACTGTACTTTGCAGCCATCTATTTTTTACCCTATCCTCTCTGAATATAGCAGACAAAAATctattattaatattatggtAAAGTATGTGCGCTGATGTTTCATCACCGTGGTAACAGAACCACACACACTGATGTGATGATCTCGATATGGTGATCTATCATGTATTTGGAATCTAATTACCATAAAGGAAACTTTTAATTTATAGAGTGCACGTACCGTGGCAAGTGGATGGCTTGATAATGTATTTTTATACACATTTGTTAAATGAAACTTTATTATTTGGAGAATGTTGCAGAGCAATAAATATGATGCTTTATCATCTTTTTGTCTA

Function

NR:

description
protoporphyrinogen oxidase-like isoform X1

GO:

id name namespace
GO:0006779 porphyrin-containing compound biosynthetic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity molecular_function

KEGG:

id description
K00231 PPOX, hemY; protoporphyrinogen/coproporphyrinogen III oxidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021592753.2 False 2721 mRNA 0.47 13 15636736 15644078
XM_036970346.1 True 2667 mRNA 0.47 13 15636736 15644078

Neighbor

gene id symbol gene type direction distance location
zmp:0000000951 LOC106578502 coding upstream 111 15632563 ~ 15636625 (+)
arhgap33 LOC106578439 coding upstream 17637 15578412 ~ 15619099 (+)
rbm42 LOC106578518 coding upstream 58935 15554750 ~ 15577801 (+)
ncam3 nca11 coding upstream 246652 15372460 ~ 15390084 (+)
sult2st3 LOC106577720 coding upstream 303770 15328444 ~ 15332966 (+)
zgc:162160 LOC106605640 coding downstream 28182 15672260 ~ 15697397 (+)
fbl fbrl coding downstream 62227 15706305 ~ 15710237 (+)
LOC110503805 LOC106605641 coding downstream 66965 15711043 ~ 15788655 (+)
zp3d.1 LOC106605642 coding downstream 147766 15791844 ~ 15795523 (+)
LOC110512192 LOC106578478 coding downstream 154867 15798945 ~ 15801186 (+)
G227962 NA non-coding upstream 8017 15628428 ~ 15628719 (+)
G227963 NA non-coding upstream 8406 15626464 ~ 15628330 (+)
G227911 NA non-coding upstream 95912 15540336 ~ 15540824 (+)
G227881 NA non-coding upstream 131351 15491365 ~ 15505385 (+)
G227846 LOC106577653 non-coding upstream 173804 15457908 ~ 15462932 (+)
G227971 NA non-coding downstream 8520 15652598 ~ 15702948 (+)
G228011 NA non-coding downstream 96142 15740220 ~ 15740681 (+)
G228032 NA non-coding downstream 157283 15801361 ~ 15801855 (+)
G228034 LOC106578507 non-coding downstream 171209 15815287 ~ 15817140 (+)
G227606 NA other upstream 392454 15243946 ~ 15244282 (+)
LOC110511049 LOC106605627 other upstream 540823 15072005 ~ 15095913 (+)
G227405 NA other upstream 638661 14997159 ~ 14998075 (+)
LOC110510950 LOC106605624 other upstream 645442 14984771 ~ 14991394 (+)
LOC118944476 LOC106605624 other upstream 661759 14942150 ~ 14984145 (+)
LOC118944532 NA other downstream 869425 16477925 ~ 16515897 (+)
LOC110503770 LOC106605493 other downstream 999273 16619192 ~ 16674738 (+)
LOC100653482 mrap2 other downstream 1150621 16794699 ~ 16801793 (+)
G230916 NA other downstream 2651276 18295354 ~ 18296105 (+)

Expression


Co-expression Network