fbl (fbrl)


Basic Information

Item Value
gene id fbl
gene name fbrl
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 15706305 ~ 15710237 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021592731.2
CCGTGGTGTATCATGGGAAGGAGGAGTCTGATGACGCATGGCCACATTGCTAGGTAGTGTGTGCTGCGTGTTCAGAAGAGGAAGATAGAGAAGACCGAGCAAAAAAATTTCGAGCTGTTTTAGATTGAGAACACAGCAATTTACCAAATATGACACCAGGATTCAGCCCCCGGGGTGGTGATCGAGGAGGCAGAGGAGGCTTCCGGGGAAGAGGAAGCTTTGGAGACAGAGGTGGTGGACGGGGAGGTTTTGGAGATAGAGGCGGACGAGGAGGATTCAGAGGCAGAGGTGGTGGTGGAGGTGGATTTAGGTCTCCAAGCGGCGAGGGTGGCTTCAGAGGCCGTGGAGGTGGTCGTGGCACCCCCAGGGGTAGAGGTGGACGTGGCGGCTTCGGGGCTGGCAGGAAAGTCACTGTGGAGCCTCATAGACATGAAGGAGTGTTCATCTGCCGTGGTAAGGAAGATGCCCTGGTGACAAAGAACATGGTGATTGGAGAGTCCGTGTATGGAGAAAAAAGGATGAATGTCGAGGAAGGAGAAACGAAGATTGAGTACAGAGCGTGGAACCCTTTCCGGTCAAAGCTGGCAGCAGCCATCTTGGGAGGAGTTGATCAGATCCACATCAAACCTGGCTCGAAGGTCATGTACCTGGGTGCCGCATCAGGGACGACAGTGTCCCATGTGTCAGACATCGTTGGACCTGAGGGTCTTGTGTATGCTGTGGAGTTCTCTCACAGGTCAGGACGTGATCTGCTCAATGTTGCCAAAAAGAGAACCAACATCATTCCCATCATTGAGGATGCCCGGCATCCACACAAATACCGCATGCTTGTTGGCATGGTAGATGTCATCTTCGCTGATGTGGCCCAGCCTGATCAGACCAGAATTGTTGCACTCAACGCTCACAATTTCCTTAAGAACGGAGGGCACTTTGTCATCTCAATCAAGGCAAACTGCATTGATTCAACGGCAGCACCGGAGGCTGTGTTTGCTGCGGAGGTGAAGAAGATGGGCTCGGAAAACATGAAGCCCCAGGAGCAGCTGACATTGGAGCCGTATGAGAGAGATCACGCCATCGTAGTAGGAATCTACAGACCTGCTCCCAAGAATAAGAAGTGAACTGGCCCTTAGCAGCTGTGGCATAGTGACTTTTTCTGTGGATCCACCTCTGCCATGGGGGGTGCTCAGCACTGGGATTTAGCAAGGCACTGATTGGACCCCCACATGCTTACACCCATATCCAAACTGACCATTTTAGTATTCCTGTCTCCGGAGCTTGGACGGTTTAGAAGTACATACGTTTTTTTGGGGTCTGGGGAGAGGGTGTCGGGGTGGAATTCACATCGCTAATTAACTCTGTAGTGCCATGTAAAGTAGTGTACAGAGGGAAAGCCTGATATATTGATTTAACTTTGTTTTTTTGTTCAAATTCATTTGAAATCTAATGCTTGTAAAGAACTGTTTCAGTTTATCATTATATTTTCCCCTTGATGTTAAAACAAGACTGGCTTACACCTATGTATGTTTCACTTTGACTTAAATGTGATTTTGTACCTTGACTTTTTTATTAAAACAGTATGTGATTGTA

Function

NR:

description
rRNA 2-O-methyltransferase fibrillarin

GO:

id name namespace
GO:0006364 rRNA processing biological_process
GO:0008033 tRNA processing biological_process
GO:0032259 methylation biological_process
GO:0005730 nucleolus cellular_component
GO:0008168 methyltransferase activity molecular_function
GO:0003723 RNA binding molecular_function

KEGG:

id description
K14563 NOP1, FBL; rRNA 2'-O-methyltransferase fibrillarin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021592731.2 True 1587 mRNA 0.49 8 15706305 15710237

Neighbor

gene id symbol gene type direction distance location
zgc:162160 LOC106605640 coding upstream 8908 15672260 ~ 15697397 (+)
ppox LOC106605668 coding upstream 62227 15636736 ~ 15644078 (+)
zmp:0000000951 LOC106578502 coding upstream 69680 15632563 ~ 15636625 (+)
arhgap33 LOC106578439 coding upstream 87206 15578412 ~ 15619099 (+)
rbm42 LOC106578518 coding upstream 128504 15554750 ~ 15577801 (+)
LOC110503805 LOC106605641 coding downstream 806 15711043 ~ 15788655 (+)
zp3d.1 LOC106605642 coding downstream 81607 15791844 ~ 15795523 (+)
LOC110512192 LOC106578478 coding downstream 88708 15798945 ~ 15801186 (+)
LOC110512168 LOC106578482 coding downstream 120596 15830833 ~ 15844953 (+)
LOC110512131 LOC106605648 coding downstream 135983 15846220 ~ 15853237 (+)
G227971 NA non-coding upstream 3357 15652598 ~ 15702948 (+)
G227962 NA non-coding upstream 77586 15628428 ~ 15628719 (+)
G227963 NA non-coding upstream 77975 15626464 ~ 15628330 (+)
G227911 NA non-coding upstream 165481 15540336 ~ 15540824 (+)
G227881 NA non-coding upstream 200920 15491365 ~ 15505385 (+)
G228011 NA non-coding downstream 29983 15740220 ~ 15740681 (+)
G228032 NA non-coding downstream 91124 15801361 ~ 15801855 (+)
G228034 LOC106578507 non-coding downstream 105050 15815287 ~ 15817140 (+)
G228223 NA non-coding downstream 115067 15825304 ~ 15825708 (+)
G227606 NA other upstream 462023 15243946 ~ 15244282 (+)
LOC110511049 LOC106605627 other upstream 610392 15072005 ~ 15095913 (+)
G227405 NA other upstream 708230 14997159 ~ 14998075 (+)
LOC110510950 LOC106605624 other upstream 715011 14984771 ~ 14991394 (+)
LOC118944532 NA other downstream 803266 16477925 ~ 16515897 (+)
LOC110503770 LOC106605493 other downstream 933114 16619192 ~ 16674738 (+)
LOC100653482 mrap2 other downstream 1084462 16794699 ~ 16801793 (+)
G230916 NA other downstream 2585117 18295354 ~ 18296105 (+)
LOC110511593 LOC106579240 other downstream 2859772 18569698 ~ 18588248 (+)

Expression


Co-expression Network