LOC100653482 (mrap2)


Basic Information

Item Value
gene id LOC100653482
gene name mrap2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 16794699 ~ 16801793 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001246353.1
ATGTCTGAGTTTAACCACTCAAATCTATCAGGCGGAAACGCTCCGGACCCGGACTACAAGTGGACGTATGAATATTACGACGATGATGAGCCTGTTTCGTTCGAGGGACTGAAAGCGCACCGATACTCCATCGTGATAGGCTTCTGGGTGGGCCTGGCTGTCTTTGTCATCTTCATGTTCTTTGTCCTGACGCTTCTCACCAAGACAGGAGCTCCACATCCTGAAGGAGCTGAGCCCTGTAAGAAGCGTGTTCGTCTGACCAGCTGTGTGGAGGACCTCCGCCCCCCTGCAGACCCTGACAACCGGCCATGCCTACAACTGGACTCCACCCTCAGCCGCTCCCTCTTCCACTGCTACATCAATGAGGAACAGGCCCAGGGGGGGTCCAGGCCTAGAGCTGGGGCAGGAGCTGTGGGAGCACCCAGAGGAGGGCTGGTCCAGGGGCCGGGGCGAGGCAGGTCAGGCAGCCCAGAGGAGcgggtggtggtggggatggaagtAGGTGTCAGCTGTGCCCTGCAAGGGGCTGCCATGTTGGGGGGGAACCGGACCGACCACAGAGAGGCAATGTCCCTGTCCCACTTCAACATCCCTAACGTTGTGAACTCCGAGCACAGCTCCACCCTGGAGGAGGACGATCTGCTGCTGGGGGAGCCGCCAATCATCATGGAGGGGGAGTGTCATCGGCCCCACAGCGCACATCACATGATGAACTAAGGTCCCCTCTACTTCCAGGGGAACCACCAATCATCCTAGATGAGGAGTGTCGTTCCCATGGGATTGACTGGGGGAACC
>TU261452
agagagagagagagagagcgcaccgTTCTGCCTGCGCTCTTGGATCTATTTGGAGATGTCTGAGTTTAACCACTCAAATCTATCAGGCGGAAACGCTCCGGACCCGGACTACAAGTGGACGTATGAATATTACGACGATGATGAGCCTGTTTCGTTCGAGGGACTGAAAGCGCACCGATACTCCATCGTGATAGGCTTCTGGGTGGGCCTGGCTGTCTTTGTCATCTTCATGTTCTTTGTCCTGACGCTTCTCACCAAGACAGGAGCTCCACATCCTGAcaggacaatgacccaacacacctccaagctgtgtaagggctatttgaccaagaagagtgatggagtgctgcttcagatgacctggactccacaatcacccaacctcaacccaattgagatggtttgggatgagttggaccgcagagtgaaggaaagacagccaataagtgctcagcatatgtgggaactcattcaa

Function

symbol description
mrap2 Enables identical protein binding activity and melanocortin receptor binding activity. Involved in negative regulation of protein localization to plasma membrane; protein localization to plasma membrane; and regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway. Located in endoplasmic reticulum and plasma membrane. Implicated in obesity.

NR:

description
PREDICTED: melanocortin-2 receptor accessory protein 2A-like

GO:

id name namespace
GO:0006112 energy reserve metabolic process biological_process
GO:0048589 developmental growth biological_process
GO:0030818 obsolete negative regulation of cAMP biosynthetic process biological_process
GO:0040008 regulation of growth biological_process
GO:0097009 energy homeostasis biological_process
GO:0034394 protein localization to cell surface biological_process
GO:0005886 plasma membrane cellular_component
GO:0031782 type 4 melanocortin receptor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001246353.1 False 795 mRNA 0.59 3 16794928 16801793
TU261452 True 475 TUCP 0.50 4 16794699 16798932

Neighbor

gene id symbol gene type direction distance location
LOC110511998 LOC106579451 coding upstream 7701 16760501 ~ 16787229 (+)
sim1a LOC106579462 coding upstream 94094 16678893 ~ 16700834 (+)
LOC110503770 LOC106605493 coding upstream 120190 16619192 ~ 16674738 (+)
LOC118936471 NA coding upstream 196926 16592154 ~ 16598002 (+)
LOC118946105 LOC106605491 coding upstream 219705 16551435 ~ 16575223 (+)
LOC110503758 LOC106605505 coding downstream 420789 17222582 ~ 17341150 (+)
LOC110505127 NA coding downstream 554981 17356774 ~ 17359570 (+)
LOC110511964 LOC106605506 coding downstream 661170 17462963 ~ 17476591 (+)
LOC110503753 LOC106579405 coding downstream 682415 17484208 ~ 17717455 (+)
LOC110511951 LOC106605515 coding downstream 917944 17719737 ~ 17723597 (+)
G228752 NA non-coding upstream 32577 16762121 ~ 16762351 (+)
G228715 NA non-coding upstream 60433 16707159 ~ 16734495 (+)
G228722 NA non-coding upstream 83111 16710910 ~ 16711817 (+)
G228711 NA non-coding upstream 92064 16702652 ~ 16702864 (+)
G228793 LOC106605502 non-coding downstream 48183 16849976 ~ 16850190 (+)
G229428 NA non-coding downstream 88228 16890021 ~ 16890258 (+)
G229430 NA non-coding downstream 91515 16893308 ~ 16896967 (+)
G229431 NA non-coding downstream 93990 16895783 ~ 16897635 (+)
G229433 NA non-coding downstream 96033 16897826 ~ 16898546 (+)
LOC118944532 NA other upstream 279035 16477925 ~ 16515897 (+)
zgc:162160 LOC106605640 other upstream 1098284 15672260 ~ 15697397 (+)
G227606 NA other upstream 1550646 15243946 ~ 15244282 (+)
LOC110511049 LOC106605627 other upstream 1699015 15072005 ~ 15095913 (+)
G230916 NA other downstream 1493561 18295354 ~ 18296105 (+)
LOC110511593 LOC106579240 other downstream 1768216 18569698 ~ 18588248 (+)
G231438 NA other downstream 2049456 18851249 ~ 18851982 (+)
G231983 LOC106597055 other downstream 2424573 19226366 ~ 19234295 (+)
LOC110512505 LOC106579702 other downstream 3025337 19821356 ~ 19844652 (+)

Expression


Co-expression Network