LOC110511352 (LOC106605528)


Basic Information

Item Value
gene id LOC110511352
gene name LOC106605528
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 18697337 ~ 18706474 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021592305.2
aaacgccaagcgaatgcttcacatttatacatccggtgaaatatctgtctcattgttctatctgtgtttCTTCCTCTCTGTAGACTTCGGCAGTTTTGCTCGCTGCGTAGCTACGAAAGGGTTCGATTTAGCTTCAAATCTCGATCTGCACCTCCGCTTTGATGGCATTTTTTCTTTCCTATAGTGCCCCCGCCACTCTTTGAAAATTCCACCTAAAAGGAAAAAACGACCCACCCCAAATATTGGGTTTTATTCTCACGTGTACAATTACTACCCAGACGGCTTAGGGGCGGCTCTCCGCCGAGAGCCGTTCGACTTCAACGCAGAGCCACCTTGGGATCCTAGCTGATAGTGGGGGACCTCCATCTCCTAACTCGTCCATTTTGCTGCATACTATCTAAGGGCTCAGAGAGCGACCACTTCACCCAGGGGCTCAGAGAGCGACCACTTCACCCAGGGGCTCAGAGAGCGACCACTTCACCCAGGGGCTCAGAGAGCGACCACTTCACCCAGGGGCTCAGAGAGCGACCACTTCACCCAGGGGCTCAGAGAGCGACCACTTCACCCAGGGGCTCAGAGAGCGACCACTTCACCCAGGGGCTCAGAGAGAGACCACTTCACCCAGGCATAATTCTTTATGACTGTCAGATTAGCAGACAACAGTTGAGATGAAGGGACTagctgatgaaccaaactactccaTCGCCCTGCTGGAGGGAGCCACGGCCCTCAGCGACATGGTTGAGAATCACATTTATGAACAAACACTGGCTGAGAAGAATGCGTTCTTCGTGGCAGACTTGGGGGTCCTTATGAGGCAACATGTTCGCTGGCGAACCCACATGCCCCAGATGCGTCCCTTCTACGCTGTCCAAGCCAACAGCAGCCTGGCTGTCATTGAGATCCTAGCTGCTCTCGGCACTGGCTTCATCTGCACCAACAAGTATGAGTTGGAGCTTGTGCAGGGCTATGGCGTTCCCTCTGAAGACATTATCTACAGCGGTGTGTGTAAGCAGATCTCCCAGATCAAGTACGCAGCTAAGAACGGCATCGACTTCCTGGTGTGTGACAACGAGGCCGAGCTACGCAAGATCGCTCGCTGCCATCCCCGTGCCAAACTGCTACTGGAGGTGTCCACAGAGGCTTCCGGTGAGGAGATGGGCATGGCGTTTGGCTCCAAGCTGAAGGACTGCAGGCACCTGCTGGAGAGCGCCAAGGAACTGGGCCTGCAGGTGGTGGGGGTCAGGTTCCACATTCCCAGCTCCTGGGACGACCCTCAGGCCTACAGCCATGCAGTGTCTGACGCTCGCTGTGTCTTTGACATGGGGGAGGATATTGGCTTCAGTATGACAATCCTGGATATTGGAGGTGGATTCAACGGCTCAGAGACTCAGCTGAAACAGATTAACAGTGCAGTCAGGCCGTTGTTGGACCTGTACTTCCCTGCATCGTCTGGCGTCTCCATCATGGCAGAGCCTGGGCGTTACTACGTGTCCTCCTCCTTCACCCTGGCTGTCAACATCATCGCTAAGGAAGTAGGCGCCCGGGATCTTTATGGCAATCACGATGAACCATCTCCCAACGATGAGCCAGAGTTCCTGTACTACATGAATGATGGGGTGTATGGCTCGTTcactagcaagctagcagacaATGTGATTCCAGCCCCAGCTCTGCCCAAGAGCGGTGTGTCTGAGGAACCAGTGTTTGCCAGCAGTCTGTGGGGTCCGTCGGGTGATGAGCTGGACCAGGTGGTGGATCAGTGTCTGCTGCCAGAGCTCAGTGTGGGAGACTGGCTGATCTTCAACAACGCTGGTGCCTATAGCCTGGGCCCTCCGTCTACTTTCACAGATTCACCCAGACCCCCTGTCTACTACACCATCTCTACTGGAGACTGgcTTGAGATGCAGGATGCTGGTATCACCCAGGACATCAGCATGAAGAACTTCTCTCTGGTCCCCTACTTCCTCCACTCCAGCCAATCAGACGAAGCCCTGTCGGTCCCAGCTTAGGCTAGCTGAACCAATCCCATGTCTCTGCTGTGCTGACCTCACCTGGTCAACATTCCAATGGGAGGAAAAGACTGAATGGTGCTTGCTGGCTAAAAGCTTTTTATTATTCATTTCATAAGGAATTtagctttttttggggggggggacaagccctatacagtatgttgttggCTCTCTCAAGGAATAGCACAGATGTTCCTTCCTTTTCCACATGCAATAAAATGGATGAGTCTGTAGGGGTGGAACTCCCACCTGTGTGGGTATCCTATGTGGTtacagtttacatacagtaaatgGAATTTAAAAGTTATACATGAAACATGTATTATATTGCCTATGTCTCCTTTTGCCAGTcttgtaaattcaattgtttaCCTACTCAAAGTGGAGCAGTTGCTTATTTTAACAAAACCTGATGTTTTAAAGCCATTTTTGGATGCTTCGCTAaaacatatttatgtttatttatggttttgtttgtgtttgttttttgtgCTATGAATATCTGATCCCCTGGCATTTATGATCAGTCAGTATTTAAAAGGGGGCATACAGTAGCCAatgatgcatcccaaatggcactctattccctatttactgcactacttttgaacagggcccacagtgcactacttttgaccagatccctatcTAGGGAatagtgtcatttgggatgcataaaACAGTACAGTTCCTCAGATAAAGGGGAACTCTATTTGACTCAAGCAATATGACTACAGAATATCATTCACCAAACATCTCGTTGATAGGGAGCTTGTGCTCACACTCTAAATATAGACCGTCTTGAGACTATTATCATAATGCAACATtgatgtttcattttttttttttttaaatccctctTACAAGTCTCTGTGGAAAGAATTGTCAGTGAATTGGTCTCCAGTTTTGCCTAAAGTAAATTAATATAAAAGCTCTGAATCATAA
>XM_021592313.2
CGAGGAAGTCAAGAGGCAACGTGAACGTCGTGGAAATCAAGAGGCTGAggttgtttaaaaaaacaaaaacacatgcaACCTAATTTCACGCTGTTGAATTTGAAGCATGTGTTTCCAGAATACAAGAGAGGAGTACCAGTGACAATTTGTGGACAACATTTTACAGTTATCGCGGTGCCATGGGAAAAAGCATGAAGACGTAACCAAGGTGTACAATTACTACCCAGACGGCTTAGGGGCGGCTCTCCGCCGAGAGCCGTTCGACTTCAACGCAGAGCCACCTTGGGATCCTAGCTGATAGTGGGGGACCTCCATCTCCTAACTCGTCCATTTTGCTGCATACTATCTAAGGGCTCAGAGAGCGACCACTTCACCCAGGGGCTCAGAGAGCGACCACTTCACCCAGGGGCTCAGAGAGCGACCACTTCACCCAGGGGCTCAGAGAGCGACCACTTCACCCAGGGGCTCAGAGAGCGACCACTTCACCCAGGGGCTCAGAGAGCGACCACTTCACCCAGGGGCTCAGAGAGCGACCACTTCACCCAGGGGCTCAGAGAGAGACCACTTCACCCAGGCATAATTCTTTATGACTGTCAGATTAGCAGACAACAGTTGAGATGAAGGGACTagctgatgaaccaaactactccaTCGCCCTGCTGGAGGGAGCCACGGCCCTCAGCGACATGGTTGAGAATCACATTTATGAACAAACACTGGCTGAGAAGAATGCGTTCTTCGTGGCAGACTTGGGGGTCCTTATGAGGCAACATGTTCGCTGGCGAACCCACATGCCCCAGATGCGTCCCTTCTACGCTGTCCAAGCCAACAGCAGCCTGGCTGTCATTGAGATCCTAGCTGCTCTCGGCACTGGCTTCATCTGCACCAACAAGTATGAGTTGGAGCTTGTGCAGGGCTATGGCGTTCCCTCTGAAGACATTATCTACAGCGGTGTGTGTAAGCAGATCTCCCAGATCAAGTACGCAGCTAAGAACGGCATCGACTTCCTGGTGTGTGACAACGAGGCCGAGCTACGCAAGATCGCTCGCTGCCATCCCCGTGCCAAACTGCTACTGGAGGTGTCCACAGAGGCTTCCGGTGAGGAGATGGGCATGGCGTTTGGCTCCAAGCTGAAGGACTGCAGGCACCTGCTGGAGAGCGCCAAGGAACTGGGCCTGCAGGTGGTGGGGGTCAGGTTCCACATTCCCAGCTCCTGGGACGACCCTCAGGCCTACAGCCATGCAGTGTCTGACGCTCGCTGTGTCTTTGACATGGGGGAGGATATTGGCTTCAGTATGACAATCCTGGATATTGGAGGTGGATTCAACGGCTCAGAGACTCAGCTGAAACAGATTAACAGTGCAGTCAGGCCGTTGTTGGACCTGTACTTCCCTGCATCGTCTGGCGTCTCCATCATGGCAGAGCCTGGGCGTTACTACGTGTCCTCCTCCTTCACCCTGGCTGTCAACATCATCGCTAAGGAAGTAGGCGCCCGGGATCTTTATGGCAATCACGATGAACCATCTCCCAACGATGAGCCAGAGTTCCTGTACTACATGAATGATGGGGTGTATGGCTCGTTcactagcaagctagcagacaATGTGATTCCAGCCCCAGCTCTGCCCAAGAGCGGTGTGTCTGAGGAACCAGTGTTTGCCAGCAGTCTGTGGGGTCCGTCGGGTGATGAGCTGGACCAGGTGGTGGATCAGTGTCTGCTGCCAGAGCTCAGTGTGGGAGACTGGCTGATCTTCAACAACGCTGGTGCCTATAGCCTGGGCCCTCCGTCTACTTTCACAGATTCACCCAGACCCCCTGTCTACTACACCATCTCTACTGGAGACTGgcTTGAGATGCAGGATGCTGGTATCACCCAGGACATCAGCATGAAGAACTTCTCTCTGGTCCCCTACTTCCTCCACTCCAGCCAATCAGACGAAGCCCTGTCGGTCCCAGCTTAGGCTAGCTGAACCAATCCCATGTCTCTGCTGTGCTGACCTCACCTGGTCAACATTCCAATGGGAGGAAAAGACTGAATGGTGCTTGCTGGCTAAAAGCTTTTTATTATTCATTTCATAAGGAATTtagctttttttggggggggggacaagccctatacagtatgttgttggCTCTCTCAAGGAATAGCACAGATGTTCCTTCCTTTTCCACATGCAATAAAATGGATGAGTCTGTAGGGGTGGAACTCCCACCTGTGTGGGTATCCTATGTGGTtacagtttacatacagtaaatgGAATTTAAAAGTTATACATGAAACATGTATTATATTGCCTATGTCTCCTTTTGCCAGTcttgtaaattcaattgtttaCCTACTCAAAGTGGAGCAGTTGCTTATTTTAACAAAACCTGATGTTTTAAAGCCATTTTTGGATGCTTCGCTAaaacatatttatgtttatttatggttttgtttgtgtttgttttttgtgCTATGAATATCTGATCCCCTGGCATTTATGATCAGTCAGTATTTAAAAGGGGGCATACAGTAGCCAatgatgcatcccaaatggcactctattccctatttactgcactacttttgaacagggcccacagtgcactacttttgaccagatccctatcTAGGGAatagtgtcatttgggatgcataaaACAGTACAGTTCCTCAGATAAAGGGGAACTCTATTTGACTCAAGCAATATGACTACAGAATATCATTCACCAAACATCTCGTTGATAGGGAGCTTGTGCTCACACTCTAAATATAGACCGTCTTGAGACTATTATCATAATGCAACATtgatgtttcattttttttttttttaaatccctctTACAAGTCTCTGTGGAAAGAATTGTCAGTGAATTGGTCTCCAGTTTTGCCTAAAGTAAATTAATATAAAAGCTCTGAATCATAA

Function

NR:

description
antizyme inhibitor 1-like

GO:

id name namespace
GO:0006596 polyamine biosynthetic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021592305.2 False 2960 mRNA 0.49 12 18697337 18705226
XM_021592313.2 True 2909 mRNA 0.49 12 18697337 18706474

Neighbor

gene id symbol gene type direction distance location
LOC110511375 NA coding downstream 20697 18633399 ~ 18676640 (-)
LOC110511506 lyric coding downstream 64090 18624581 ~ 18633247 (-)
laptm4b LOC106605533 coding downstream 72910 18612092 ~ 18624427 (-)
LOC110503735 LOC106605534 coding downstream 86461 18604759 ~ 18623150 (-)
LOC110511626 LOC106579251 coding downstream 338323 18353521 ~ 18359014 (-)
LOC110511312 LOC106605543 coding upstream 87511 18793985 ~ 18797369 (-)
LOC110511207 oxr1 coding upstream 120405 18826879 ~ 19024152 (-)
LOC110511176 LOC106579058 coding upstream 359038 19065512 ~ 19282368 (-)
rims2a LOC106579570 coding upstream 709580 19416054 ~ 19652601 (-)
LOC110512409 LOC106605396 coding upstream 948809 19655283 ~ 19667465 (-)
G231679 NA non-coding downstream 12619 18684112 ~ 18684718 (-)
G231677 NA non-coding downstream 16049 18681037 ~ 18681288 (-)
G231649 NA non-coding downstream 101841 18594986 ~ 18595496 (-)
G231648 NA non-coding downstream 104055 18593036 ~ 18593282 (-)
G231686 NA non-coding upstream 3618 18710092 ~ 18710295 (-)
G231753 NA non-coding upstream 108337 18814811 ~ 18815043 (-)
G231755 NA non-coding upstream 109897 18816371 ~ 18816870 (-)
G231756 NA non-coding upstream 110569 18817043 ~ 18817417 (-)
G231757 NA non-coding upstream 111066 18817540 ~ 18818396 (-)
G231652 rn146 other downstream 95462 18599730 ~ 18601875 (-)
LOC110503747 lars2 other downstream 566283 18093704 ~ 18154474 (-)
LOC110505118 LOC106579600 other downstream 719428 17975160 ~ 17985544 (-)
G229707 NA other downstream 1648993 17043792 ~ 17048344 (-)
G229380 LOC106605502 other downstream 1847138 16849972 ~ 16850199 (-)
G232980 NA other upstream 941612 19648086 ~ 19648629 (-)
G233052 LOC106605397 other upstream 1049730 19756204 ~ 19757908 (-)
G233513 LOC106561082 other upstream 1845309 20551783 ~ 20551997 (-)

Expression


Co-expression Network