LOC110503853 (LOC106579991)



Basic Information


Item Value
gene id LOC110503853
gene name LOC106579991
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 20758809 ~ 20783316 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036964643.1
ATGATACACATAGAATTTTCAACTCTGCTGTTGTGTACGGCTCACACCTACCTGTATGGCTGGAACAAGTTCCTGAGTTCCTCCACCTACAAGTGGTGCACCCTAACAGGCTACATGCTGTGTCTGGTGCTTCCCTCTGTGGTGCTGCTGCTCAAGCTGCTGCTCATGGACCGAACCATCATACGCCagggatgggaggggggggggGTGTATATCTGCGGGGAAAGTGTGGAGGCCAAACAGGCAGTGATGGCGGTAGCCACCAAGCTGGGTTTCAGTGCCCTGGACCGGGGCTTTCTCTCAGTGGCCCGGGAGCTGGAGGACTTCCCCCTGCAGCTGTTCCCCCAGTGGAGGCTCCCCCTGTACATCGCCACTGGCCTCAGTGCTGCCTTCTTCTTCTACCTGCTGATCAGAGACATCATCTATGCATACGTCACCCAGGGCAAAGACATCTCCTTCAGAATCATGGTCTCACTGGCTAACAAGatcAGAGAGAACAGGACCACTGAGTTTGATACAACGACGGCCTGGCGTGGCGACTCCTACTTATCCCTGGGAATTCTGGGATTTAGCCTGTACGTCCTATTGGGAATCACATCTATTCCCTCCGTCAGTAACGTTCTCAGCTGGAGGGAGTTCAGCTTCATACAGTCCAAGCTGGGTCACCTGACTCTGCTGTTATGTACGGCTCACACCTACCTGTATGGCTGGAACAAGTTTCTGAGTTCCTCCACCTACAAGTGGTACACCCCACCGGGCTACATGCTGTGTCTGGTGCTTCCCTCTGTGGTGCTGCTGCTCAAGCTGCTGCTCATCACCCCCTGTGTGGACCGAACCATCACCCGCATACGCCAGGGATGGGAGAGGGGGGCAGATCAGAGGAACCCTAAAGACAGCCAACCACTGATACCttagacgacacacacacacacacgcacacgcacgcacacgcacaataACACCCTCAGTGTGATGACAGCTTTGTCTTCAAGGCATGAACTCTTGTTTCTTTGCTATTATACCCTCTGAGGTTGTTTACCATTCCATCATCGTTTGCAATGTttctgggatttaaaaaaaacagcaataACATTCAATTGATATGCAgtcatatttatttttgtattacaCTGTAAACATTGTTGCATTTTAATGCATATATTTTTAACCATACGTAAACCAGACACTAGCTTTCACTGGTgaaagctctctctcg

Function


NR:

description
metalloreductase STEAP4

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036964643.1 True 1216 mRNA 0.51 5 20758809 20783316

Neighbor


gene id symbol gene type direction distance location
LOC118936416 steap4 coding upstream 9 20718857 ~ 20758800 (+)
LOC118946510 NA coding upstream 49775 20702204 ~ 20709034 (+)
LOC110512944 LOC106605423 coding upstream 111735 20629412 ~ 20647074 (+)
tbrg4 LOC106579951 coding upstream 136744 20605165 ~ 20622065 (+)
LOC110512899 LOC106579931 coding upstream 227470 20509292 ~ 20531339 (+)
LOC118946512 LOC106579994 coding downstream 63681 20846997 ~ 20911413 (+)
mindy3 LOC106580009 coding downstream 185128 20968444 ~ 21022357 (+)
itga8 LOC106580029 coding downstream 242821 21026137 ~ 21091292 (+)
LOC110513109 muc1 coding downstream 373860 21157176 ~ 21164038 (+)
LOC118946533 NA coding downstream 383234 21166550 ~ 21169783 (+)
G233550 NA non-coding upstream 131442 20627031 ~ 20627367 (+)
G233546 NA non-coding upstream 138984 20608900 ~ 20619825 (+)
G233515 NA non-coding upstream 205486 20552815 ~ 20553323 (+)
G233508 NA non-coding upstream 209793 20548810 ~ 20549016 (+)
G233507 LOC106566552 non-coding upstream 210144 20548406 ~ 20548665 (+)
G233687 NA non-coding downstream 129838 20913154 ~ 20915815 (+)
G233754 NA non-coding downstream 144582 20927898 ~ 20932727 (+)
G233753 LOC106580016 non-coding downstream 180440 20963756 ~ 20964155 (+)
G233820 NA non-coding downstream 313681 21096997 ~ 21100178 (+)
G233824 NA non-coding downstream 324169 21107485 ~ 21107689 (+)
G233545 NA other upstream 150084 20608293 ~ 20608725 (+)
G233521 LOC106579937 other upstream 193097 20558776 ~ 20565712 (+)
LOC110512505 LOC106579702 other upstream 914157 19821356 ~ 19844652 (+)
G231983 LOC106597055 other upstream 1524514 19226366 ~ 19234295 (+)
G231438 NA other upstream 1906827 18851249 ~ 18851982 (+)
G234322 dcst2 other downstream 480759 21264075 ~ 21264506 (+)
G234340 LOC106580151 other downstream 503410 21286726 ~ 21287002 (+)
kiaa0319 LOC106580477 other downstream 1234278 22017579 ~ 22037490 (+)
LOC110503910 LOC106580557 other downstream 1275226 22057484 ~ 22068080 (+)
G235426 LOC106581355 other downstream 1521177 22303641 ~ 22304906 (+)

Expression



Co-expression Network