Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110513414 |
| gene name | gnrh-r |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 21493159 ~ 21497274 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| gonadotropin-releasing hormone receptor |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0097211 | cellular response to gonadotropin-releasing hormone | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004968 | gonadotropin-releasing hormone receptor activity | molecular_function |
| id | description |
|---|---|
| K04280 | GNRHR; gonadotropin-releasing hormone receptor |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036964154.1 | True | 1288 | mRNA | 0.55 | 3 | 21493159 | 21497274 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513388 | LOC106580236 | coding | upstream | 9643 | 21472944 ~ 21483516 (+) |
| LOC110513285 | LOC106580187 | coding | upstream | 85962 | 21390417 ~ 21407197 (+) |
| LOC110513274 | LOC106580182 | coding | upstream | 132335 | 21357445 ~ 21360824 (+) |
| zgc:171704 | LOC106580162 | coding | upstream | 207418 | 21283497 ~ 21285741 (+) |
| trim33l | LOC106580136 | coding | upstream | 211326 | 21270516 ~ 21281833 (+) |
| LOC110513472 | creb3l4 | coding | downstream | 122451 | 21619725 ~ 21624474 (+) |
| LOC110513504 | LOC106580325 | coding | downstream | 135066 | 21632340 ~ 21643258 (+) |
| LOC100136306 | LOC106580330 | coding | downstream | 152167 | 21649441 ~ 21713248 (+) |
| LOC110503897 | LOC106571067 | coding | downstream | 222971 | 21720245 ~ 21733022 (+) |
| pdia7 | LOC106580339 | coding | downstream | 235833 | 21733107 ~ 21737376 (+) |
| G234497 | NA | non-coding | upstream | 6969 | 21485989 ~ 21486190 (+) |
| G234496 | NA | non-coding | upstream | 7266 | 21485664 ~ 21485893 (+) |
| G234491 | NA | non-coding | upstream | 22971 | 21469863 ~ 21470188 (+) |
| G234480 | NA | non-coding | upstream | 33963 | 21457836 ~ 21459196 (+) |
| G234504 | NA | non-coding | downstream | 258 | 21497532 ~ 21497902 (+) |
| G234500 | NA | non-coding | downstream | 4068 | 21501342 ~ 21501913 (+) |
| G234654 | NA | non-coding | downstream | 54147 | 21551421 ~ 21554541 (+) |
| G234677 | NA | non-coding | downstream | 90169 | 21587443 ~ 21587802 (+) |
| G234775 | NA | non-coding | downstream | 263863 | 21761137 ~ 21761338 (+) |
| G234340 | LOC106580151 | other | upstream | 206157 | 21286726 ~ 21287002 (+) |
| G234322 | dcst2 | other | upstream | 228653 | 21264075 ~ 21264506 (+) |
| G233545 | NA | other | upstream | 884434 | 20608293 ~ 20608725 (+) |
| G233521 | LOC106579937 | other | upstream | 927447 | 20558776 ~ 20565712 (+) |
| LOC110512505 | LOC106579702 | other | upstream | 1648507 | 19821356 ~ 19844652 (+) |
| kiaa0319 | LOC106580477 | other | downstream | 520320 | 22017579 ~ 22037490 (+) |
| LOC110503910 | LOC106580557 | other | downstream | 561268 | 22057484 ~ 22068080 (+) |
| G235426 | LOC106581355 | other | downstream | 807219 | 22303641 ~ 22304906 (+) |
| LOC110514034 | NA | other | downstream | 963266 | 22460524 ~ 22472917 (+) |
| G235571 | NA | other | downstream | 1175462 | 22672736 ~ 22698834 (+) |
