LOC110513497


Basic Information

Item Value
gene id LOC110513497
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21612154 ~ 21619661 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002471999.2
tactttggaGGCAAAATGTAGCAGTGTGTTAGAGATGATACTGGACATACTGGAAAGGATCAGTTACAGTATCGTATTGAGTTCTGAAGTAAGTAAAGGCCTATACTTTTGCCAACATTCTCTATTGAGGCGTTTTTGCAGTAGGACAGTTAGAGCAAAATCAGGGGATCATGGCAAAATCTAAAAGTGCGTCACACCATCTGGAGTTCTGACTTTGAACAGGTCATGGATATCTCAAAGCAGTTTTGATGGTTTGGACTACATGCCTGGCACATCAATGATGGCTGGAAGAGCCTGGTCTGTTGGTGTTCCTTGCAAAAATGGATAGCAGGGTGGTCAGTCAATCTTTGTGGCGCCAAAGTCTGTCCTGCTGGTGGATGGTGGGAAGACCATTTGGGTGCAAGCGCTGGGGGTGACTCCTAGTGTGCTTGGCCAGGGAATTACTTGTGCCATCCAGAGACATGTGACAGAGTATGCCTGCAGTCACTTTCCACAACTCACTTGCCCGAAAACTGTGCCCAGGACAGACCCATCATCTGAAAAACGGTCTATCGCCTGTTGGCCATAGAGGTGGTCTCCCCTCCCCATTCGACTGTAAGCCAATGGAGGGTGTCTGAGAGCTACACTTTGCTGTTTCACTCAGACTTGAGAGAGAAGCAGGTTGTGCAGACATGGCTCTCAGAAAAGGATCTTCCTCTGTTGCCCTCTCTGGGTGGTCATCTGAAGTGCAGATGAACCCAGCTGATGTCCCTGGCCTGGAGTGTTCGAGGGCCTGGCTGTGGAGTTACAGGAGGACAGTCAAGAGGTGCTGGAGATCTGTGTTGCTCTACTCCTCCACAAGAGCATCATCTCTTTCAGTCAAGCCCTAAAGCTGGCCCAGGGC

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0030001 metal ion transport biological_process
GO:0016020 membrane cellular_component
GO:0046873 metal ion transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002471999.2 True 883 mRNA 0.49 4 21612154 21619661

Neighbor

gene id symbol gene type direction distance location
LOC110513449 LOC106580288 coding downstream 3024 21587450 ~ 21609130 (-)
LOC110513430 LOC106580258 coding downstream 24834 21551418 ~ 21587320 (-)
LOC110503882 LOC106580249 coding downstream 72967 21514538 ~ 21539187 (-)
LOC110503879 LOC106605450 coding downstream 142927 21457830 ~ 21469227 (-)
LOC110513321 LOC106580205 coding downstream 156182 21438546 ~ 21455972 (-)
LOC118944502 LOC106580547 coding upstream 97192 21716853 ~ 21718331 (-)
LOC118946878 NA coding upstream 124764 21744425 ~ 21755710 (-)
LOC110513558 LOC106580365 coding upstream 136996 21756657 ~ 21760819 (-)
pmvk pmvk coding upstream 265120 21884781 ~ 21891946 (-)
LOC110513756 LOC106580458 coding upstream 282812 21902473 ~ 21926314 (-)
G234623 NA non-coding downstream 111223 21500650 ~ 21500931 (-)
G234620 NA non-coding downstream 114390 21497468 ~ 21497764 (-)
G234619 gnrh-r non-coding downstream 115015 21496830 ~ 21497139 (-)
G234617 gnrh-r non-coding downstream 118369 21493224 ~ 21493785 (-)
G235052 NA non-coding upstream 12621 21632282 ~ 21632789 (-)
G235145 NA non-coding upstream 168386 21788047 ~ 21789380 (-)
G235165 NA non-coding upstream 185869 21805530 ~ 21805751 (-)
G235157 NA non-coding upstream 263578 21883239 ~ 21919236 (-)
G234621 NA other downstream 113322 21498408 ~ 21498832 (-)
G234600 NA other downstream 142209 21469661 ~ 21469945 (-)
G234224 LOC106605437 other downstream 431472 21178597 ~ 21180682 (-)
glipr2l LOC106605424 other downstream 960458 20648378 ~ 20652052 (-)
G235092 LOC100194668 other upstream 119184 21738845 ~ 21743411 (-)
G235881 NA other upstream 954172 22573833 ~ 22574989 (-)
G237047 NA other upstream 1537448 23157109 ~ 23189031 (-)
LOC110514600 ensa other upstream 2151863 23771511 ~ 23780158 (-)

Expression


Co-expression Network