LOC110513472 (creb3l4)


Basic Information

Item Value
gene id LOC110513472
gene name creb3l4
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21619725 ~ 21624474 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021593290.2
AGGGACTTCGGGGTTATTTGACGATTATGAACTGCACAACGTCGGTGTAAATATACTGATTTATAAAAGAGACAAGTTTTTGCATTATGGCATAagtaagaaaaagagagaaatccATATACTCTATCAGTTAGTGATTTTAGAGCCAACAGGTTGCGCTTAGGCGACGCACATCCGCCATGGTTATTCGCCCTACGGGATGATTGACATAAGAATTGCCAGCTGGATTTTTGGGAGAAATGCGTCTTACACTGGTTGATCTTTAAATACTACTCGTCTGCATTTTTCTCCTCTGGTTGGGCCTACTATTGTTGTAATGCTCTTGAAGTAGACCTACATATATATTCTGAACAACATCGCTTCTGAAAACAGCAGCAGACAAGACATGGATGTAGAGAATGGAGAGCTGTTTTTCGGACACAAGGAGGACAGTATGACAGAGGAGAGTTGGGGACTGGAAGGGCCATTTTCTTGCTCTGATGTCATCTATGCTGGCTCTGAAAAAACCCTGGATGAATGCACGGTAGACCCCCAAAGTGGTCTAAATGACAGCGAGCCAGAGGATGTGCTTTATGCCATCAACCCAAATGATGTCTTCCCTACCAGAGCCCTAGTGGAGACCTCCTCAGAGAGCGACAGTGGCATCTCTGAGGAACCTTGCTCTGAGAGCCCTCTAGCTGCCACGGTGGACCCCTCTCAGGCCCCCACAACTATCTATCAGGTGGTCTATGACATCAGCACCCTGGCCAACATCAAGACGGAGCCAGAGCAGCATAGCGTCGATGTCATTTCCATAgaactcgATGAGTGGCGTTCTCAGATGTTGATCTCGGAGTCCTGTATTGTCAACGAGTTACCTCAAGTATCCGCTGGGAGATTTGACCATGGTCACCTTTCTACCCACTCTGCTTCCACCTCAGGCCCCACCAGTCCAGACAGCCCACTGCTTTACCCTGATCTCACACTGACTGAGGAGGAGCAGAAACTGCTGAACCAAGAGGGGATCTCTCTGCCCAACAACCTGCCCCTTACCAAggtcagacacacacgcacgGCTGAGGAACGGATTCTGAAAAAAGTGAGACGCAAAATACGCAACAAACAGTCAGCCCAGGACAGCCGTCGCAGGAAGAAGGACTATGTGGATGGGCTTGAGAGCAGGGCAGCGGCTTGCTCAGCGCAAAACAAAGAGCTGCAGAGGACCGTGGAACAGCTGGAGAAACACAACATGTCTCTCCTGGCTCAGCTGCGCAGACTACAGTCACTGATCAAGCAGACGGTCACTAAAGCAGCACAGACCAGCACCTGCGTCATGATTATCCTCTTCTCTCTGGGCCTCATCATCTTCCCAAGTTACAGCCCCTTCAACTGGGGCACCTCATCCATAGAAGAGGACTATACACCAAAAGGGGTTATCTCCAGAAACATCCTCACAGATCCTGCTTCATCCTTGCAAGCTGCTGAGGATGTGGATAACCATATCATTCGGCCAGATTCCCTACCCGTTTCCCGTGACCTCAGTCAATCAGATCCCCCGGATGCTTCCAGAATACTAAAGCAACCAATAGAAAGTCCCAAAATCACTGACATTGAGGGTGTGGTCCTGGAGGagagccaaccagggaacagttcGACTCTGGTTGACGGGCAGACTGAACCTCTGGCCCTGGGCCTGGTGTCAGCAACAGGAAAAGGGAGCACAAGCCTTGATCCCACCAAACCAGCCCACGCTGatgagatgtagacagtgttGATGAACTAGTTTGACTGCATTCCATTTGCTTTATAGAGCTCTTCAAAGCTCCTTGCCTTCATTATGGACAATGGGAGGAATATGCTGGGGCAGTCCAATATGCTGCCCCATTACCACATTGGTTTTCAACCAGACCCCTTTGGGTGCCTTCAATGCCTAACCATTGCCTTACTCTTTTTTTGGTGCTGTGGTGCAAACAAGGTTTAATCTGGGATTCGGTGGAATGGTCTTCAAAATGGGTTAAACATTTTTGACTTTTCTATTTAAGTACCACTTCTTAATGTTTGTATGGAAAGGGTTTCTAACTTTGAACTCCGAGGAGTTAGTTAGTACATTCTGTGGGAAGGATGAAGGTTGTTAGATTGTAGCTGGAAAAACACCACAGATATGAATATATTGTTTTGGCTATGCATTCTTTCAGCAAGTCTTAgtgtacaccacacacacactccttgaaAGTGAGCCTACACCGATGGATTATATTTTTGACTAACTACCTTACTCGTGTGTACATTAACATGTTTGTGAAACTGCCTAGCTAGTTTCTGACTGGCATCTGTGCTCAATGTAGTTTGCAGCTCCCATAACTGAATGCTGAGAGACTCATTTTGCACTGTAAGCAAACTGTCATATCTTTTGCGTGTACTTAAAAATGTCCTTTGGCCCTCATTCGGTTAAGAGATAAACAATGTGTACAATCCAAACATATCCTTATCTTAAGCATGACATTGTGGTCCAAATGTATACTCTTCACAGAACTTGCTATCCTAATTTTAGTGGTTGCTGGTGTCCTATTTTATGTGCTTTATATTTATTAAATGGGAACAATACTG
>XM_021593293.2
AGGGACTTCGGGGTTATTTGACGATTATGAACTGCACAACGTCGGTGTAAATATACTGATTTATAAAAGAGACAAGTTTTTGCATTATGGCATAagtaagaaaaagagagaaatccATATACTCTATCAGTTAGTGATTTTAGAGCCAACAGGTTGCGCTTAGGCGACGCACATCCGCCATGGTTATTCGCCCTACGGGATGATTGACATAAGAATTGCCAGCTGGATTTTTGGGAGAAATGCGTCTTACACTGGTTGATCTTTAAATACTACTCGTCTGCATTTTTCTCCTCTGGTTGGGCCTACTATTGTTGTAATGCTCTTGAAGTAGACCTACATATATATTCTGAACAACATCGCTTCTGAAAACAGCAGCAGACAAGACATGGATGTAGAGAATGGAGAGCTGTTTTTCGGACACAAGGAGGACAGTATGACAGAGGAGAGTTGGGGACTGGAAGGGCCATTTTCTTGCTCTGATGTCATCTATGCTGGCTCTGAAAAAACCCTGGATGAATGCACGGGTCTAAATGACAGCGAGCCAGAGGATGTGCTTTATGCCATCAACCCAAATGATGTCTTCCCTACCAGAGCCCTAGTGGAGACCTCCTCAGAGAGCGACAGTGGCATCTCTGAGGAACCTTGCTCTGAGAGCCCTCTAGCTGCCACGGTGGACCCCTCTCAGGCCCCCACAACTATCTATCAGGTGGTCTATGACATCAGCACCCTGGCCAACATCAAGACGGAGCCAGAGCAGCATAGCGTCGATGTCATTTCCATAgaactcgATGAGTGGCGTTCTCAGATGTTGATCTCGGAGTCCTGTATTGTCAACGAGTTACCTCAAGTATCCGCTGGGAGATTTGACCATGGTCACCTTTCTACCCACTCTGCTTCCACCTCAGGCCCCACCAGTCCAGACAGCCCACTGCTTTACCCTGATCTCACACTGACTGAGGAGGAGCAGAAACTGCTGAACCAAGAGGGGATCTCTCTGCCCAACAACCTGCCCCTTACCAAggtcagacacacacgcacgGCTGAGGAACGGATTCTGAAAAAAGTGAGACGCAAAATACGCAACAAACAGTCAGCCCAGGACAGCCGTCGCAGGAAGAAGGACTATGTGGATGGGCTTGAGAGCAGGGCAGCGGCTTGCTCAGCGCAAAACAAAGAGCTGCAGAGGACCGTGGAACAGCTGGAGAAACACAACATGTCTCTCCTGGCTCAGCTGCGCAGACTACAGTCACTGATCAAGCAGACGGTCACTAAAGCAGCACAGACCAGCACCTGCGTCATGATTATCCTCTTCTCTCTGGGCCTCATCATCTTCCCAAGTTACAGCCCCTTCAACTGGGGCACCTCATCCATAGAAGAGGACTATACACCAAAAGGGGTTATCTCCAGAAACATCCTCACAGATCCTGCTTCATCCTTGCAAGCTGCTGAGGATGTGGATAACCATATCATTCGGCCAGATTCCCTACCCGTTTCCCGTGACCTCAGTCAATCAGATCCCCCGGATGCTTCCAGAATACTAAAGCAACCAATAGAAAGTCCCAAAATCACTGACATTGAGGGTGTGGTCCTGGAGGagagccaaccagggaacagttcGACTCTGGTTGACGGGCAGACTGAACCTCTGGCCCTGGGCCTGGTGTCAGCAACAGGAAAAGGGAGCACAAGCCTTGATCCCACCAAACCAGCCCACGCTGatgagatgtagacagtgttGATGAACTAGTTTGACTGCATTCCATTTGCTTTATAGAGCTCTTCAAAGCTCCTTGCCTTCATTATGGACAATGGGAGGAATATGCTGGGGCAGTCCAATATGCTGCCCCATTACCACATTGGTTTTCAACCAGACCCCTTTGGGTGCCTTCAATGCCTAACCATTGCCTTACTCTTTTTTTGGTGCTGTGGTGCAAACAAGGTTTAATCTGGGATTCGGTGGAATGGTCTTCAAAATGGGTTAAACATTTTTGACTTTTCTATTTAAGTACCACTTCTTAATGTTTGTATGGAAAGGGTTTCTAACTTTGAACTCCGAGGAGTTAGTTAGTACATTCTGTGGGAAGGATGAAGGTTGTTAGATTGTAGCTGGAAAAACACCACAGATATGAATATATTGTTTTGGCTATGCATTCTTTCAGCAAGTCTTAgtgtacaccacacacacactccttgaaAGTGAGCCTACACCGATGGATTATATTTTTGACTAACTACCTTACTCGTGTGTACATTAACATGTTTGTGAAACTGCCTAGCTAGTTTCTGACTGGCATCTGTGCTCAATGTAGTTTGCAGCTCCCATAACTGAATGCTGAGAGACTCATTTTGCACTGTAAGCAAACTGTCATATCTTTTGCGTGTACTTAAAAATGTCCTTTGGCCCTCATTCGGTTAAGAGATAAACAATGTGTACAATCCAAACATATCCTTATCTTAAGCATGACATTGTGGTCCAAATGTATACTCTTCACAGAACTTGCTATCCTAATTTTAGTGGTTGCTGGTGTCCTATTTTATGTGCTTTATATTTATTAAATGGGAACAATACTG
>XM_021593298.2
AGGGACTTCGGGGTTATTTGACGATTATGAACTGCACAACGTCGGTGTAAATATACTGATTTATAAAAGAGACAAGTTTTTGCATTATGGCATAagtaagaaaaagagagaaatccATATACTCTATCAGTTAGTGATTTTAGAGCCAACAGGTTGCGCTTAGGCGACGCACATCCGCCATGGTTATTCGCCCTACGGGATGATTGACATAAGAATTGCCAGCTGGATTTTTGGGAGAAATGCGTCTTACACTGGTTGATCTTTAAATACTACTCGTCTGCATTTTTCTCCTCTGGTTGGGCCTACTATTGTTGTAATGCTCTTGAAGTAGACCTACATATATATTCTGAACAACATCGCTTCTGAAAACAGCAGCAGACAAGACATGGATGTAGAGAATGGAGAGCTGTTTTTCGGACACAAGGAGGACAGTATGACAGAGGAGAGTTGGGGACTGGAAGGGCCATTTTCTTGCTCTGATGTCATCTATGCTGGCTCTGAAAAAACCCTGGATGAATGCACGGTAGACCCCCAAAGTGGTCTAAATGACAGCGAGCCAGAGGATGTGCTTTATGCCATCAACCCAAATGATGTCTTCCCTACCAGAGCCCTAGTGGAGACCTCCTCAGAGAGCGACAGTGGCATCTCTGAGGAACCTTGCTCTGAGAGCCCTCTAGCTGCCACGGTGGACCCCTCTCAGGCCCCCACAACTATCTATCAGGTGGTCTATGACATCAGCACCCTGGCCAACATCAAGACGGAGCCAGAGCAGCATAGCGTCGATGTCATTTCCATAgaactcgATGAGTGGCGTTCTCAGATGTTGATCTCGGAGTCCTGTATTGTCAACGAGTTACCTCAAGTATCCGCTGGGAGATTTGACCATGGTCACCTTTCTACCCACTCTGCTTCCACCTCAGGCCCCACCAGTCCAGACAGCCCACTGCTTTACCCTGATCTCACACTGACTGAGGAGGAGCAGAAACTGCTGAACCAAGAGGGGATCTCTCTGCCCAACAACCTGCCCCTTACCAAgGCTGAGGAACGGATTCTGAAAAAAGTGAGACGCAAAATACGCAACAAACAGTCAGCCCAGGACAGCCGTCGCAGGAAGAAGGACTATGTGGATGGGCTTGAGAGCAGGGCAGCGGCTTGCTCAGCGCAAAACAAAGAGCTGCAGAGGACCGTGGAACAGCTGGAGAAACACAACATGTCTCTCCTGGCTCAGCTGCGCAGACTACAGTCACTGATCAAGCAGACGGTCACTAAAGCAGCACAGACCAGCACCTGCGTCATGATTATCCTCTTCTCTCTGGGCCTCATCATCTTCCCAAGTTACAGCCCCTTCAACTGGGGCACCTCATCCATAGAAGAGGACTATACACCAAAAGGGGTTATCTCCAGAAACATCCTCACAGATCCTGCTTCATCCTTGCAAGCTGCTGAGGATGTGGATAACCATATCATTCGGCCAGATTCCCTACCCGTTTCCCGTGACCTCAGTCAATCAGATCCCCCGGATGCTTCCAGAATACTAAAGCAACCAATAGAAAGTCCCAAAATCACTGACATTGAGGGTGTGGTCCTGGAGGagagccaaccagggaacagttcGACTCTGGTTGACGGGCAGACTGAACCTCTGGCCCTGGGCCTGGTGTCAGCAACAGGAAAAGGGAGCACAAGCCTTGATCCCACCAAACCAGCCCACGCTGatgagatgtagacagtgttGATGAACTAGTTTGACTGCATTCCATTTGCTTTATAGAGCTCTTCAAAGCTCCTTGCCTTCATTATGGACAATGGGAGGAATATGCTGGGGCAGTCCAATATGCTGCCCCATTACCACATTGGTTTTCAACCAGACCCCTTTGGGTGCCTTCAATGCCTAACCATTGCCTTACTCTTTTTTTGGTGCTGTGGTGCAAACAAGGTTTAATCTGGGATTCGGTGGAATGGTCTTCAAAATGGGTTAAACATTTTTGACTTTTCTATTTAAGTACCACTTCTTAATGTTTGTATGGAAAGGGTTTCTAACTTTGAACTCCGAGGAGTTAGTTAGTACATTCTGTGGGAAGGATGAAGGTTGTTAGATTGTAGCTGGAAAAACACCACAGATATGAATATATTGTTTTGGCTATGCATTCTTTCAGCAAGTCTTAgtgtacaccacacacacactccttgaaAGTGAGCCTACACCGATGGATTATATTTTTGACTAACTACCTTACTCGTGTGTACATTAACATGTTTGTGAAACTGCCTAGCTAGTTTCTGACTGGCATCTGTGCTCAATGTAGTTTGCAGCTCCCATAACTGAATGCTGAGAGACTCATTTTGCACTGTAAGCAAACTGTCATATCTTTTGCGTGTACTTAAAAATGTCCTTTGGCCCTCATTCGGTTAAGAGATAAACAATGTGTACAATCCAAACATATCCTTATCTTAAGCATGACATTGTGGTCCAAATGTATACTCTTCACAGAACTTGCTATCCTAATTTTAGTGGTTGCTGGTGTCCTATTTTATGTGCTTTATATTTATTAAATGGGAACAATACTG

Function

symbol description
creb3l4 Orthologous to human CREB3L4 (cAMP responsive element binding protein 3 like 4).

NR:

description
cyclic AMP-responsive element-binding protein 3-like protein 4 isoform X3

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K09048 CREB3; cyclic AMP-responsive element-binding protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021593290.2 False 2586 mRNA 0.46 10 21619725 21624474
XM_021593293.2 False 2571 mRNA 0.46 10 21619725 21624474
XM_021593298.2 True 2568 mRNA 0.46 10 21619725 21624474

Neighbor

gene id symbol gene type direction distance location
LOC110513414 gnrh-r coding upstream 122451 21493159 ~ 21497274 (+)
LOC110513388 LOC106580236 coding upstream 136209 21472944 ~ 21483516 (+)
LOC110513285 LOC106580187 coding upstream 212528 21390417 ~ 21407197 (+)
LOC110513274 LOC106580182 coding upstream 258901 21357445 ~ 21360824 (+)
zgc:171704 LOC106580162 coding upstream 333984 21283497 ~ 21285741 (+)
LOC110513504 LOC106580325 coding downstream 7866 21632340 ~ 21643258 (+)
LOC100136306 LOC106580330 coding downstream 24967 21649441 ~ 21713248 (+)
LOC110503897 LOC106571067 coding downstream 95771 21720245 ~ 21733022 (+)
pdia7 LOC106580339 coding downstream 108633 21733107 ~ 21737376 (+)
LOC110513517 LOC100194668 coding downstream 114036 21738510 ~ 21744261 (+)
G234677 NA non-coding upstream 31923 21587443 ~ 21587802 (+)
G234654 NA non-coding upstream 65184 21551421 ~ 21554541 (+)
G234500 NA non-coding upstream 117812 21501342 ~ 21501913 (+)
G234504 NA non-coding upstream 121823 21497532 ~ 21497902 (+)
G234497 NA non-coding upstream 133535 21485989 ~ 21486190 (+)
G234775 NA non-coding downstream 136663 21761137 ~ 21761338 (+)
G234799 NA non-coding downstream 179409 21803883 ~ 21804116 (+)
G234812 NA non-coding downstream 241319 21865793 ~ 21867110 (+)
G234813 NA non-coding downstream 243310 21867784 ~ 21868301 (+)
G234817 NA non-coding downstream 256577 21881051 ~ 21882985 (+)
G234340 LOC106580151 other upstream 332723 21286726 ~ 21287002 (+)
G234322 dcst2 other upstream 355219 21264075 ~ 21264506 (+)
G233545 NA other upstream 1011000 20608293 ~ 20608725 (+)
G233521 LOC106579937 other upstream 1054013 20558776 ~ 20565712 (+)
LOC110512505 LOC106579702 other upstream 1775073 19821356 ~ 19844652 (+)
kiaa0319 LOC106580477 other downstream 393120 22017579 ~ 22037490 (+)
LOC110503910 LOC106580557 other downstream 434068 22057484 ~ 22068080 (+)
G235426 LOC106581355 other downstream 680019 22303641 ~ 22304906 (+)
LOC110514034 NA other downstream 836066 22460524 ~ 22472917 (+)
G235571 NA other downstream 1048262 22672736 ~ 22698834 (+)

Expression


Co-expression Network