LOC100136306 (LOC106580330)


Basic Information

Item Value
gene id LOC100136306
gene name LOC106580330
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21649441 ~ 21713248 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036971924.1
GTGGAAACGAAAGCCTACCCCTGTGCATGAATGAGTAAGACGCCGCCacgaggtgaacacacacactttcatacaAGCACATACACACTGTTCCAGCGCCAGGCAGTCAGTCTCTACTCCGACTGGCCAAAGCTGCCTCATATGGAATTTAGCCTCATATGGATAGCCTCAAGCTATCCAGCGTAACACTGAAATATACAGAGTACAAGGGATACTGGCATGAaaccagacatacacacacagacacagggataTGCAGCTGTGTGAGGAGCCGGACACACCCTCAGACCAGACGAAGggaggcagagtgtgtgtgtgcgtgtttctttGACCTGTGGCTGTAGAGGATTTTCTTGGTGTGTGACGGCAGTTGTCATCTCTTGTTCTTTACCTGATGCCGTGGGATTTCCTGACCCTGGAGTTCAACAGCTGACCCATGCAGGCATAGAATCAGCTTCCCTGAGTTGTGGACCTGGAACACAGCTAAAGGTGCTGAGCAGTGCTGGTACTTTGCTAACCTTTCCCTGGAATATTTTCTAATTCAGGCAAAAAGTTATCATGCTACAACTATGAAACAACAGGCACATTTTCTGCAGAGATATGCTACTTTGTCTGACACAGCAAATAATCAAGGACTGTCTTTGCTTAGCCTAAAATAATTGAATCAGGAAAGCCAACGCCAACTTTGTCCAGTCTGTTTTCTTTGGTAATAAGAGGTGGGAGCTAGTACCTCTCAAATTACTGACTGTGGCTGTACATTCATTCTGTTGATTCTCCTATTTATTTTATTCTGTTTTCTTTGTGCGCACTAAAAGGAAAAACTTAATTGATGTTTTTTTTGGCCGATATCCCCTGCTTTCGTGAACCACGCGTTGCCTTTTCGCGGGTTTCGCTTACCCATCAGCTCCTCTGCCCACACACAGCTCGAGCCTCCCAGCTGATATTTCAcctcagtcactgacagtcacagaTGCCAAGACGTCGGCATAAACCGGAGCTTGACATGGAGGGAGTAAACTCAATTTAAGtCTCCCTATGTCTCCCTCTTAAGCTCAACAGGATAAATAATTCACAAGGACATAATTCAACAGCCTAACAGGatgaggaggcagggagagaaacTGTTGCTGGTTTTTCTTCTGCTGCTGGGTGCCTGTCTCCAGTGGGTCCAGTCTGGCAGGTCTTCCCGGCACCGTGATTCACATCGACGCCCCAGAGAGCACCGGGACCATCGGCAGCACCGGAACATCACGCTGGCCATCATCCTACCACAGAGAAACACTGCCTACCCCTGGGCCTGGCCCCGTGTGGGTCCGGCTCTGGAACGAGCCATTGACACCATCAACACTGACCCAGCGCTCCTCCCTGGCCACCACCTGGGTTACGTGTTTGAGAACAGCGAGAACGAGGAGGGCATCTGCTCTGAGTCCATCGCCCCACTCATGGCTGTTGACCTCAAGTTCGCCCACGACCCCTGGGCTTTCATTGGGCCGGGCTGTGACTACACCTCCTCCCCAGTGGGCCTCTTCACCACCCACTGGGACATCCCCATGGTAACGGCGGGCGCCCCAGCCGTGGGCTTCAACGGAATCAACATGTACCCGTCCATCACCAACACGGGCCCCACGCACAAGAAGCTGGGCAAGTTCGGCCTCCATATCTGCAAGCACTTTGAGTGGAAGGAGCAGGTGCTGCTCATGTTCAGTGACAACAAGAAGGACGACCGACCGTGCTACTTCGCTGTGGAGGGCCTCTACACAGAGCTGCACTTGAACAACATCACCTCGGTGGACCTGGTGTTTGAGGAAAACACTGGACCAGTCAACTACTCTGACCTGCTCCACAACATCAAGCAAGATGGCCGAGTGGTGTTTGTGTGTTGCTCTCCGGACACATTCAGGCAGCTGATGGTTCACTTCCGGCGGGCAGGCCTTCCTCAGGAGGAGTTTGTTTTCTTCTACATTGACATGTTTGGACACAGCCTGGACTCCCAGAATGCTCAACCGTGGGCCAGAGGGGACCAAGACGACCTTGTCGCCAAGGAGGCCTTCCAGAGTGTGAAAATCCTGACCTATAGAGAACCACAGAACCCTGAATATAAAGATTTTGTGAGGGATCTGAAGACAGATGCCAAGAGAATGTTCAACTTTACGGTGGAGGACTCACTGATGAACATAATCTCCGGAGGGTTCTACGACGGGTTGATGCTGTACACCCACGCCCTGAACGAGACCATGACCTCACCAGAGGACAGACCTGTGGGGAAAACCGTAACCAGGAGGATGTGGAACCGCACCTACAACGGTGTAACAGGCCTGGTGCAGATAGATGAAaatggggacagagagacagactttgCTTTCTGGGACATGACTGACACCAACACCAGTGTTTTCCAGATTGTGTCCGTGTACAACGGCTCTCAGAAGAAGCTGAGGGCCTTGCCTGGGATGGACATCCAGTGGCCAGGGGGCGCTGCTCCTTTAGATGTGCCCGTCTGTGGCTTTAAGAACGACAACCCAGCCTGCCTCGCACGAACCATCACAATCCACCAGATGGTAACAATTGTGGTGTtcttcatcattatcatcatcctcACAATTACTGTCTTCATATACAGgaagCTTAAGCTTGAAAATGAACTGGTGGCTCAGCTGTGGAGGGTCTCCTGGGAGGATATTCAGATGAGCAACATGGAGAAAGTGCTGCGAAGCGCAGGCAGCAAGCTCACTCTGTCCCTTAGAGGCTCCAACTACGGCTCCCTATTAACAGGAGATGGAAACTTTCAGGTGTTTGCCAAGACAGGCTACTACAAGGCGAACATTGTGGCCATCAAATACATCAACAGAAAACGCATTGAGCTCACCAGAAATGTGCTGTTTGAACTGAAACATATGCGTGATATTCAGAATGAGCACCTGACCCGCTTCATCGGAGCCTGTATCGACCCCCCCAACATCTGCATCATCACAGAGTACTGTCCTCGGGGTAGCTTACAGGACATCATGGAAAATGAGAGCATCACACTGGACTGGATGTTCAGATACTCGTTAATTAATGACATTGTAAAGGGCATGGCTTTCCTCCACAACAGTGTCATCGTCTCCCACGGCAACCTGAAGTCGTCCAACTGCGTGGTGGATAACCGCTTTGTGTTGAAGATCACCGACTACGGCCTGTCCAGCTTCCGCACCGAGAGCAACACAGACGACGCCCATGCTTACTATGCCCGGAAACTGTGGATGGCCCCAGAGCTGCTGAGGTTGGAGAGTGCCCCTCTATGTGGCACCCAGAAGGGGGACGTCTACAGCTTTGGCATCATTCTCCAGGAGGTGGCGCTACGCCACGGAGCCTTCTATCTGGAGGGAGAGCCGCTCAGCCCcaaagAAATCATGGATCGGGTGGCTCTGGGTGAGTGGCCGTGCCTGCGGCCTGCTGTCAACCCTCAGATCCACAGCCAGGAGCTGGGACAACTCATGCAGCGCTGCTGGGCAGAGGAGCCCACCGAGAGGCCAGAGTTCAACCACATCAAACTTCTGCTACGCAAACAGAACAGggagtgCAGCACTAACATCCTGGATAACCTGCTGTCCCGTATGGAGCAGTATGCTAACAACCTGGAGGAGCTGGTGGAGGAGAGAACCCAGGCCTACCACGATGAGAAACGCAAGGCTGAGGCCCTGCTCTACCAGATACTACCACATTCAGTGGCGGAGCAGCTAAAGAGAGGGGAGACGGTGCAGGCCGAGGCCTTTGATTCAGTCACCATCTACTTCAGTGACATTGTGGGCTTCACAGCCATATCAGCTGAGAGCACACCTATGCAGGTTGTGACCCTGCTCAATGACCTCTACACCTGTTTTGATGCCATCATTGACAACTTTGATGTTTACAAGGTGGAGACCATCGGCGATGCCTACATGGTGGTGTCTGGCCTGCCGGTGAGGAACGGGAAGCTACACGGCCGAGAGATCGCCCGCATGGCCCTGGCTCTGCTCAACGCTGTACGCACCTTCAAAATCCGCCACCGGCCTGACCAGCAGCTCAAACTACGCATTGGCATCCACAGCGGCCCTGTGTGTGCAGGAGTGGTGGGGCTGAAGATGCCACGGTACTGTCTGTTTGGAGACACAGTCAACACCTCTTCACGACTGGAGTCCAATGGTGAAGCGCTGAAGATCCATGTGTCTGCGGCCACACGTGACGTCCTGCAGGAGTTCAACTGCTTCCAGCTGGAGCTGAGAGGAGATGTGGCGATGAAGGGGAAAGGGAAAATGACCACCTACTGGCTACTGGGAGAGAGCAAGAGCAATGAGTCAACGAGCTAAGGGGACAAGCCAAGGAGGGAGGAAGGTCATGAAGGAAGAAATGGTGGAGGAAAATGTGAGCAAATAATGGGAACCACTGACTGATGTTCTGGAGCAAGTAAACAAATGAAGAGGCCTGGTGAATGAATGAGGTGGGGATTGGGGAGGTAGATGTGGAAGAAGGAGGATGTAGAGAACTTTCTTCACTTCAGCCCTCCTGCACTTGAACATCTAGATTCTAAGGATATATAGAAAGCTACATgctctgagagtgtgtgtgtgatgttctgTGTATATGTTTTTCCAGTTATATTTCGATGTTGAAGGTTTTGGATGCAACACTGATGGTATTTAGatcggtaaaaaaaaaaaagattcacaAACAGACCTTTACAGGAAGTTGTGGATATTGCTACCTGGTGGTCACATTATGTAACTGTTTTTTGAATTAATGTATTTTATGAGTACATagtatcccactgggcacagaagtcagttcaacgtctagttttgatttaaatttggttgagttgtcaactaattcAACGTGAAATTAACATTGGATTCAGAAAAAAAGACTAAATGCCtgtacgttgatgacttttttgcaaatccaatcagattcccacgttgattcaacatcatcacatacattttgggggttgaaatgacatggaaatgaCGTTCAAACTTTGGGTCTGGGATTTATCATTTGATTCATTTCCACATTAGTGTTTGTGACATGTATCCTCAGACCCCAACCACAATCACTGAGCCTACTCTGGAGTTAAAATGACTTGCTTTATatatgtgggtgggtgggtgtgtctaATGTCTCATCACTGTATATGATTTGTCTATTTACAGTCATATCAGTCTTATTATTTTGTACAATACAGATGTTGTTTATTTCTCAATAGATTATTTTTCTATTGCCTAAAGGGCAATTCACAGAAATGCACTTAAGATAGATACATCCTCTTACTCTGGTGAAATAAAGTCAAGCGTCCCACTTCTTCGGCACCGTATACAGTTTCATTATTCTCACTGAAGTGTACAATTGCCTCTCAATCTGTCTAATCAGATTCAGTGTAATGCATTATTGTTGTTAGTAAAAATATGCAGCTGAGCTTACATCATACCCATTGAAAGTGGCATGATTTTGAACATTACATGTAACagacaaaataatggaaacacttgagtaaatgggggatacaaagtatattgaaagcacaGGTGTGGTTcgtgagttaattaagcaattaacatcccttcatgcttagggtcatataCAAAATGCTGGGCAGACTATTATTTTGGCTACGctcccccataggatgacaatgcccccatccacagggcacgagtggtcactgaatggtttgataagAATGAAAACGGTGTAAACCATATGTCATGGCTGTCTGTCACCAGATCTTGATCCAATTGAATACTTAGGGGATATTCTGGTGCGTTTTCCACCCCAAAAcatcaaattatggaatttctcatggaagaatgtaGCATCCCTACaaaagagttccagacacttgtagaatttaTGCCAAGGTAacttgaagctgttctggctctaCAAGTCTTTAAGCCACCTTTACAAGTCTTTAAGagactttatgttggtgtttctttTATTTTACCTGTATTCAACAGTAATTGAAGAAAGGTAACCATTTCTGCTGGAAAGACAGGCTCTTGACAGAGGATAGCTTTATGAAAATTGTGGATTGACCGCTGGACACACACTGGCTCCTGATTTCCTGAATGGATTTGTCTGAACTGTTACTCTGAAAACACCCCTGGAATAAAATGAAGAGGTCACCAGGGAACTCTTAAAAAGGGTTCACACTGAGAACCTCTATAACTTTGCAATAACAAACCATGTCGAAAGGACAAAATGAATTCTGGGGTAGATGAGTTTAAAGGAATTCTGGGTTAGATGTGTATAAAGTTCCATATTTTGGTTTGGTGTTCACAGTAACCTTTGAGTTTGAGAGTCATGGAGAATGGTATTGTTTTTTGCGTCTCAAGCCAACAGTGTTCATCTGTTGAGAAGTGTTGAACAGATCAATACTGTCTGTAAGACCTCATATATCAGCCTGTTGACATATATTTTCACCTTGTGTTTTTCGGTTTGAATCAGTAAATATGGTATGTGTA

Function

NR:

description
atrial natriuretic peptide receptor 1-like

GO: NA

KEGG:

id description
K12323 ANPRA, NPR1; atrial natriuretic peptide receptor A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036971924.1 True 6488 mRNA 0.48 22 21649441 21713248

Neighbor

gene id symbol gene type direction distance location
LOC110513504 LOC106580325 coding upstream 6183 21632340 ~ 21643258 (+)
LOC110513472 creb3l4 coding upstream 24967 21619725 ~ 21624474 (+)
LOC110513414 gnrh-r coding upstream 152167 21493159 ~ 21497274 (+)
LOC110513388 LOC106580236 coding upstream 165925 21472944 ~ 21483516 (+)
LOC110513285 LOC106580187 coding upstream 242244 21390417 ~ 21407197 (+)
LOC110503897 LOC106571067 coding downstream 6997 21720245 ~ 21733022 (+)
pdia7 LOC106580339 coding downstream 19859 21733107 ~ 21737376 (+)
LOC110513517 LOC100194668 coding downstream 25262 21738510 ~ 21744261 (+)
LOC118964374 NA coding downstream 30473 21743721 ~ 21743856 (+)
LOC110513574 LOC106580380 coding downstream 60420 21773668 ~ 21789374 (+)
G234677 NA non-coding upstream 61639 21587443 ~ 21587802 (+)
G234654 NA non-coding upstream 94900 21551421 ~ 21554541 (+)
G234500 NA non-coding upstream 147528 21501342 ~ 21501913 (+)
G234504 NA non-coding upstream 151539 21497532 ~ 21497902 (+)
G234497 NA non-coding upstream 163251 21485989 ~ 21486190 (+)
G234775 NA non-coding downstream 47889 21761137 ~ 21761338 (+)
G234799 NA non-coding downstream 90635 21803883 ~ 21804116 (+)
G234812 NA non-coding downstream 152545 21865793 ~ 21867110 (+)
G234813 NA non-coding downstream 154536 21867784 ~ 21868301 (+)
G234817 NA non-coding downstream 167803 21881051 ~ 21882985 (+)
G234340 LOC106580151 other upstream 362439 21286726 ~ 21287002 (+)
G234322 dcst2 other upstream 384935 21264075 ~ 21264506 (+)
G233545 NA other upstream 1040716 20608293 ~ 20608725 (+)
G233521 LOC106579937 other upstream 1083729 20558776 ~ 20565712 (+)
LOC110512505 LOC106579702 other upstream 1804789 19821356 ~ 19844652 (+)
kiaa0319 LOC106580477 other downstream 304346 22017579 ~ 22037490 (+)
LOC110503910 LOC106580557 other downstream 345294 22057484 ~ 22068080 (+)
G235426 LOC106581355 other downstream 591245 22303641 ~ 22304906 (+)
LOC110514034 NA other downstream 747292 22460524 ~ 22472917 (+)
G235571 NA other downstream 959488 22672736 ~ 22698834 (+)

Expression


Co-expression Network