LOC110513574 (LOC106580380)


Basic Information

Item Value
gene id LOC110513574
gene name LOC106580380
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21773668 ~ 21789374 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036971929.1
AGTAGGCCTATTTGCAAATGGCACGCAACATATCCAAGAAATTTGATTGTAGTAGACTAATCAGTGGATTGTTTCAGGGCCACCACAGGCACCTTTTATAGTCTACATGAATattgaggtttaaaaaaaaaaaagtatgcgAGGGCTTTCCTTGGTGTATGTCGCGTTTCTCTAGCTCCCCTGTAGGCTTGGGTAACCAAAGCGCATTGAAATAAAGGGAGCCGTCGAACCAGTCTgcctactactctctctctccggcACGGAAACCGGTTGCTGTCGGAATACGGCACAACCTACTTATTTCATTTCAAGGGAGACAAACGTACTTTAAATCCGGGCGTTCGTAAAGCCTACTACACCGTTGAAGAAGTAGAAAGTTGTGACACGCCCAACCTCACATCAAAACTGCGCCCGAGATTATCGTGAATTTATTTGGAATGCAGTAGCTCTGGGAAACAATCAGAAAAAAAGAGTGTGAGGGGGGGGAAAAAGAGCAAGACCATGGCTCAGATTAAGCTGCAGAATGTGGAGGACTACTATGAGATTGGAGAGGTTCTTGGCAGTGGTCACTTTGGGCAAGTGCGTGCGGTGCTGGAGCGTGCATCCGGGGTCCGCTGGGCGGGGAAGTTCCTGAAGCTGCGTCGGAGCGCCAGTAGTCGCCTGGGCCTGGAGAGGAAGAgtgtggagagggaggtggagataCTGCAGAGCCTGCAGCACGCCAACGTCATGGCCCTCAGGGACGTGTTTGAGAGTCGCGCTGAGGTGGTGCTCATCGTGGAGCTTATCAGTGGTGGGGAGCTGTTTGATTTCATAGCAGAGAAGGAGAGCTTGTCTGAGGAGGAGGCCATAGAGTTCCTGAAGCAGATCCTCAAGGGAGTTGGCTTTATGCACACTAAGAACATTGCCCACTTTGACCTCAAGCCAGAGAACATCATGCTGGCAGACAAGATGATGCCACACCCCCACATCAAGATCATTGACTTTGGACTGGCCCATCGCCTCAAACAGGGGGAGGAGTACAGGAGCCTCTCTGGGACCCCACAGTACATCGCCCCTGAGGTGATTAACTACGAACCCCTGAGCGAGGCAGCCGACATGtggAGTATTGGTGTGATAACCTACATATTGTTGAGTGGTTTGTCCCCCTTTCAAGGAGATAATGATGAAGAGACACTAAAGAACATCGTGGGGATGATCTATGAGTTTGAAGAGATCTATTTCAACCAGACCAGCGCCATGGCCAAAGACTTTATTGAGAAACTGCTGGTCAAAGACCCAATagagagaatgacagcgAATGAATGTCTAGTACACCCTTGGATCAAGCCCCTCACGCGCAAACAGGCGGCTAACAGAAGTCGATCATCCATCAACATGAAAAGCTTCAAGAAGTTCAACGCCAAGAGGAAATGGAAGATGTCGTTTAACATGGTGTGGGCGTGTAACAGATTATTTCGCCTGCAGTTGCAGTGTAAAAGCAGGTCGCAGGAGGACCCGGAACTGAGACAGTGTGAGAGCGACCAGGAGGACACGGAGACCAAGCCTGCTTCTCTCATTCGCCGTAGACTCAGCAGCAATTCCTAAATAAGTCCACTGGGGTCACTAACACAGCCTCAGACCACCTCTATCCATCCCACCATGGGGAAACGGAGAGAAGTCTTGTGAGTGATGCACCGGTCAACAATACTCTAAGTTACAGAATGACTGACTATGGCAGTGACGATACGCATAACGAACACGTGATGTGCAGGTGCCTAAAGCCAGTGTTGGTCCACAGAGTTGAATCTTAATGTCTCAGACATGGTTCCTGATAAAAACCAGTGTAGTTTACAAACCGCTTCTGTTGCACCTCACCCCCATTTGACCTAGGGTGTAGCCATTTTCTGAAATGTATTTGTGCCTTTTAAGTTTGACATATTTATTTTCTGAAAATGCCAAAACCTTTGTTTAGGTTTGATGGTTTACAGGATCGAGTTTGTCCCACTTATAGCTAACCTCAATTGCAATTATTCTGCCTTACAATATTATGTGGTTATTATTTAGCCTCTGATATTGTTGACTGCTGTGTGCCTATCAAAGGTCAAGACTTTTCCAAACTGATTTTATTTCATTTTCTTAGACATATGCATTTCATACAATTAACTAGAAAAAGTACTTGGTAACATACATTATTTGAATGTGTCATCATTTTGATATAAGCTTATACAGAGCTACTGTACTATACACAGTTTTAGCCATGTTTGACACTGACACGTGGTCTTAGTGTGTAGAGCCCTTAAAAGCCTTACCAAACTTCATCTTAGATATACTTTGTTGAACATTTCAACTATCTTTGGCTTATGTCAAATTTACAGTTTTTTTAAATGGAAAGCTATTTTATAACCTTGTGTAGgcttgt

Function

NR:

description
death-associated protein kinase 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036971929.1 True 2401 mRNA 0.46 12 21773668 21789374

Neighbor

gene id symbol gene type direction distance location
LOC110513517 LOC100194668 coding upstream 29407 21738510 ~ 21744261 (+)
LOC118964374 NA coding upstream 29812 21743721 ~ 21743856 (+)
pdia7 LOC106580339 coding upstream 36292 21733107 ~ 21737376 (+)
LOC110503897 LOC106571067 coding upstream 40646 21720245 ~ 21733022 (+)
LOC100136306 LOC106580330 coding upstream 60420 21649441 ~ 21713248 (+)
arhgef2 LOC106605464 coding downstream 959 21790333 ~ 21845588 (+)
LOC110513614 LOC106580392 coding downstream 56758 21846132 ~ 21855155 (+)
LOC110513633 LOC106580396 coding downstream 67944 21857318 ~ 21884768 (+)
LOC110513748 decr1 coding downstream 99639 21889013 ~ 21893991 (+)
LOC118944503 NA coding downstream 221556 22010898 ~ 22012458 (+)
G234775 NA non-coding upstream 12330 21761137 ~ 21761338 (+)
G234677 NA non-coding upstream 185866 21587443 ~ 21587802 (+)
G234654 NA non-coding upstream 219127 21551421 ~ 21554541 (+)
G234500 NA non-coding upstream 271755 21501342 ~ 21501913 (+)
G234504 NA non-coding upstream 275766 21497532 ~ 21497902 (+)
G234799 NA non-coding downstream 14509 21803883 ~ 21804116 (+)
G234812 NA non-coding downstream 76419 21865793 ~ 21867110 (+)
G234813 NA non-coding downstream 78410 21867784 ~ 21868301 (+)
G234817 NA non-coding downstream 91677 21881051 ~ 21882985 (+)
G234822 NA non-coding downstream 110908 21900282 ~ 21900839 (+)
G234340 LOC106580151 other upstream 486666 21286726 ~ 21287002 (+)
G234322 dcst2 other upstream 509162 21264075 ~ 21264506 (+)
G233545 NA other upstream 1164943 20608293 ~ 20608725 (+)
G233521 LOC106579937 other upstream 1207956 20558776 ~ 20565712 (+)
LOC110512505 LOC106579702 other upstream 1929016 19821356 ~ 19844652 (+)
kiaa0319 LOC106580477 other downstream 228220 22017579 ~ 22037490 (+)
LOC110503910 LOC106580557 other downstream 269168 22057484 ~ 22068080 (+)
G235426 LOC106581355 other downstream 515119 22303641 ~ 22304906 (+)
LOC110514034 NA other downstream 671166 22460524 ~ 22472917 (+)
G235571 NA other downstream 883362 22672736 ~ 22698834 (+)

Expression


Co-expression Network