LOC110513748 (decr1)


Basic Information

Item Value
gene id LOC110513748
gene name decr1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21889013 ~ 21893991 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110513748
gatcaATTACCCACATTGAATGCATTCATTATCCAAGAGTTCTAGATACTGATAAATCAGTATGAACTCTGCTTTAAGTAGTCCATGCTGTGCAGTGTGATGTTAGACCCCAAGTCAATTGAAGCTGCTGTGTACCAACTGGTGGAGGTTGCTGGTCTCCCTGATGTGGTGATCAACAACGCTGCAGGGAACTTCATCTCCCCGTCAGAGAAGCTGTCTGCCAACGCATGGAGGACCATCACAGACATTGTCCTGAACGGCCGGGCTTCATCACCCTGGAGCTGGGCAAGAGGCTGATACTAGCCGACAAGGGTGCTGCGTTTCTGGCCATCACCGCCATCTACGCAGAGAACGTCTCTGGATTTGTGATTCCCAGCGCGGCTGCTAAGTCAGGAGTGGAAACTCTGTGCATGTCTTTGGCTGCGGTGTGGGGGAGGTACGGCTTGAGGTTTAATGTCATCCAGCCAGGACCAATCAGAACCAAGGGGGCCTTCAGTCGTCTCGATCCTGCGGGCATGTTTGAGAAGGCCATGATCGGCAGGATACCCGTGGGCAGGCTGGGCACGCCCGGAGAGATTGCCAACCTGGCAGCCTACCTGTGCAGTGACTATGCCTGCTGGGTGTCTGGAGCGATCTTACGAATGGAAGTTGGAGATTGTCTCCATGGCAGGAGAAGTCAATGATCTGAGGAGGgtcaCTAAGGAGCAGTGGGCTATGATGGAGACCATGATCAGGGGCACCAAGGGATCCTAAGAAGTCAAGATGGGAACATGATACTAACTCTACCACTGTTAATGCTCCagggaaacacagacacacaggtactgtacacacagacaatctttccctctgtttctgaccgacagttgaagttggaagtttacatacacttaggttggagtcattaaaactcatttttcaacca

Function

symbol description
decr1 Orthologous to human DECR1 (2,4-dienoyl-CoA reductase 1).

NR:

description
PREDICTED: 2,4-dienoyl-CoA reductase, mitochondrial isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110513748 True 925 mRNA 0.51 7 21889013 21893991

Neighbor

gene id symbol gene type direction distance location
LOC110513633 LOC106580396 coding upstream 4245 21857318 ~ 21884768 (+)
LOC110513614 LOC106580392 coding upstream 33858 21846132 ~ 21855155 (+)
arhgef2 LOC106605464 coding upstream 43425 21790333 ~ 21845588 (+)
LOC110513574 LOC106580380 coding upstream 99639 21773668 ~ 21789374 (+)
LOC110513517 LOC100194668 coding upstream 144752 21738510 ~ 21744261 (+)
LOC118944503 NA coding downstream 116939 22010898 ~ 22012458 (+)
kiaa0319 LOC106580477 coding downstream 123588 22017579 ~ 22037490 (+)
LOC118947026 LOC106605474 coding downstream 157544 22051535 ~ 22057256 (+)
LOC110503910 LOC106580557 coding downstream 163493 22057484 ~ 22068080 (+)
LOC118944657 LOC106580616 coding downstream 262356 22156347 ~ 22224887 (+)
G234817 NA non-coding upstream 6028 21881051 ~ 21882985 (+)
G234813 NA non-coding upstream 20712 21867784 ~ 21868301 (+)
G234812 NA non-coding upstream 21903 21865793 ~ 21867110 (+)
G234799 NA non-coding upstream 84897 21803883 ~ 21804116 (+)
G234775 NA non-coding upstream 127675 21761137 ~ 21761338 (+)
G234822 NA non-coding downstream 6291 21900282 ~ 21900839 (+)
G234823 LOC106580458 non-coding downstream 8501 21902492 ~ 21906182 (+)
G234834 NA non-coding downstream 33908 21927899 ~ 21928166 (+)
G234843 NA non-coding downstream 47072 21941063 ~ 21941718 (+)
G234844 NA non-coding downstream 47896 21941887 ~ 21942100 (+)
G234340 LOC106580151 other upstream 602011 21286726 ~ 21287002 (+)
G234322 dcst2 other upstream 624507 21264075 ~ 21264506 (+)
G233545 NA other upstream 1280288 20608293 ~ 20608725 (+)
G233521 LOC106579937 other upstream 1323301 20558776 ~ 20565712 (+)
LOC110512505 LOC106579702 other upstream 2044361 19821356 ~ 19844652 (+)
G235426 LOC106581355 other downstream 410502 22303641 ~ 22304906 (+)
LOC110514034 NA other downstream 566549 22460524 ~ 22472917 (+)
G235571 NA other downstream 778745 22672736 ~ 22698834 (+)

Expression


Co-expression Network