LOC110503903 (LOC106605471)


Basic Information

Item Value
gene id LOC110503903
gene name LOC106605471
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21937182 ~ 21949846 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110503903
ATGACAGAATGGCTTCTGAGCCGGACGAGACACAGGCCTAAGATCGCAGTGGTGTGTGGCTCCGGCCTGGGCCTGCTCGCTGATGGTGTTACCAACAAACAGATCTTCCCTTACGCAGATATCCCCAACTTCCCGGTCAGCTCAGTCCTGGGTCATGAGGGGTGTCTGGTATTCTAAAAGGCAAGTCCTGCGTCTTCATGCAAGGAAGATTCCATCTCTACGAGGGCTATTCACTCTGCCGGGTCACATTCCCGGTGGGGATCTTCAAGCTGTTGGGCGTGGAGATGCTCATTGTGACTAACGCCTCAGGAGGCCTGTGTCAGGACTTCAAAGTGGGCGACATCATGCTCATTAAGGACCACATTAATGTGCCAGGCTTCGCCGGCCAGCACCTTCTGTGCGGCCCCAATGATGAACGGTTTGGGATCCGGTTCCCCTGCACTGCCTACAGTAACGACCTGAGGAAGCTAGCTCTGGATATCAGTCATGAGCTGGACTAAACCAACTTTGTGCGGGAAGGGGTGTACTGCATGGTGAGCGGGCCCAACTTCGAGACCATCGCTGAGACACGCATGTTGCAGGTTTTGGGGTGCGACTCTGTGGGCATGAGTACGGTCCTAGAGGTAGCAGTGGCCTCAGTGGCCTGAGGGTCTTTGGTCTCTCACTCATCTTATTGCTGTATATCGTCTCCCTGGACTACAGCCGTGAGGAGAAGGTGACCCATTAGGAGGTCCCGGAGATCAGCAAGATGAGGGCGGAACATCTGCAGATGATGCTTAACACACTTATCGCCCGCTCCCACCAGCTGGACGAAGGCATCAACGTCAACTGAAGGGGGAGtgggatggagatagagagacatactCTAATGTTGaagcacactctctctcacacacagacacacacagaaatgtaCACTGAcatgtgcacacatacacacgtacataTCATTCACTGTGAATCTTAACAAAAATCAACCACCCATGATGAAAGTGTTTAGTCAATAGTTTAATAAAATGTcctaaagttgttgttttttacacaAGAACCAGTCTGTTAAATGTAAATGCTTATTTGATGATAGGGCACTGACATGAGAATATGTAATGCTCCTTTTTA

Function

NR:

description
purine nucleoside phosphorylase-like

GO:

id name namespace
GO:0009116 nucleoside metabolic process biological_process
GO:0004731 purine-nucleoside phosphorylase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110503903 True 1119 mRNA 0.50 6 21937182 21949846

Neighbor

gene id symbol gene type direction distance location
LOC110513756 LOC106580458 coding downstream 10868 21902473 ~ 21926314 (-)
pmvk pmvk coding downstream 49910 21884781 ~ 21891946 (-)
LOC110513558 LOC106580365 coding downstream 176363 21756657 ~ 21760819 (-)
LOC118946878 NA coding downstream 181472 21744425 ~ 21755710 (-)
LOC118944502 LOC106580547 coding downstream 218851 21716853 ~ 21718331 (-)
LOC118944504 LOC106605473 coding upstream 89632 22039478 ~ 22040884 (-)
LOC110513791 LOC106580504 coding upstream 93543 22043389 ~ 22051474 (-)
LOC110513818 gbp coding upstream 140010 22089856 ~ 22091328 (-)
LOC110513832 ccne2 coding upstream 345021 22294867 ~ 22302014 (-)
LOC110513844 LOC106581355 coding upstream 356093 22305939 ~ 22317533 (-)
G235157 NA non-coding downstream 17946 21883239 ~ 21919236 (-)
G235200 NA non-coding downstream 47742 21888091 ~ 21889440 (-)
G235165 NA non-coding downstream 131431 21805530 ~ 21805751 (-)
G235145 NA non-coding downstream 147802 21788047 ~ 21789380 (-)
G235235 NA non-coding upstream 1931 21951777 ~ 21952115 (-)
G235236 NA non-coding upstream 2388 21952234 ~ 21952452 (-)
G235274 NA non-coding upstream 57059 22006905 ~ 22007104 (-)
G235276 NA non-coding upstream 59872 22009718 ~ 22010013 (-)
G235278 NA non-coding upstream 63091 22012937 ~ 22013170 (-)
G235092 LOC100194668 other downstream 193771 21738845 ~ 21743411 (-)
G234621 NA other downstream 438350 21498408 ~ 21498832 (-)
G234600 NA other downstream 467237 21469661 ~ 21469945 (-)
LOC110513321 LOC106580205 other downstream 481466 21438546 ~ 21455972 (-)
G235881 NA other upstream 623987 22573833 ~ 22574989 (-)
G237047 NA other upstream 1207263 23157109 ~ 23189031 (-)
LOC110514600 ensa other upstream 1821678 23771511 ~ 23780158 (-)
G237657 LOC106605316 other upstream 2230710 24180556 ~ 24183964 (-)
G237832 NA other upstream 2571373 24521219 ~ 24521544 (-)

Expression


Co-expression Network