Item | Value |
---|---|
gene id | LOC110513791 |
gene name | LOC106580504 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 22043389 ~ 22051474 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036972047.1 | False | 2435 | mRNA | 0.42 | 12 | 22043389 | 22050828 |
XM_036972056.1 | False | 2432 | mRNA | 0.42 | 12 | 22043389 | 22050828 |
XM_036972066.1 | False | 2420 | mRNA | 0.42 | 12 | 22043389 | 22050828 |
XM_021593512.2 | False | 2630 | mRNA | 0.42 | 12 | 22043389 | 22051257 |
XM_021593504.2 | False | 2558 | mRNA | 0.42 | 12 | 22043389 | 22051288 |
XM_021593499.2 | True | 2559 | mRNA | 0.42 | 12 | 22043389 | 22051474 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118944504 | LOC106605473 | coding | downstream | 2505 | 22039478 ~ 22040884 (-) |
LOC110503903 | LOC106605471 | coding | downstream | 93543 | 21937182 ~ 21949846 (-) |
LOC110513756 | LOC106580458 | coding | downstream | 117075 | 21902473 ~ 21926314 (-) |
pmvk | pmvk | coding | downstream | 156117 | 21884781 ~ 21891946 (-) |
LOC110513558 | LOC106580365 | coding | downstream | 282570 | 21756657 ~ 21760819 (-) |
LOC110513818 | gbp | coding | upstream | 38382 | 22089856 ~ 22091328 (-) |
LOC110513832 | ccne2 | coding | upstream | 243393 | 22294867 ~ 22302014 (-) |
LOC110513844 | LOC106581355 | coding | upstream | 254465 | 22305939 ~ 22317533 (-) |
LOC110513910 | LOC106605373 | coding | upstream | 273248 | 22324722 ~ 22336054 (-) |
LOC110513923 | LOC106605373 | coding | upstream | 284988 | 22336462 ~ 22341729 (-) |
G235283 | NA | non-coding | downstream | 26075 | 22016919 ~ 22017314 (-) |
G235279 | NA | non-coding | downstream | 29825 | 22013257 ~ 22013564 (-) |
G235278 | NA | non-coding | downstream | 30219 | 22012937 ~ 22013170 (-) |
G235276 | NA | non-coding | downstream | 33376 | 22009718 ~ 22010013 (-) |
G235274 | NA | non-coding | downstream | 36285 | 22006905 ~ 22007104 (-) |
G235312 | NA | non-coding | upstream | 40840 | 22092314 ~ 22095038 (-) |
G235750 | LOC106580611 | non-coding | upstream | 189550 | 22241024 ~ 22241932 (-) |
G235785 | LOC106580611 | non-coding | upstream | 232406 | 22283880 ~ 22284776 (-) |
G235793 | NA | non-coding | upstream | 267452 | 22318926 ~ 22319165 (-) |
G235794 | NA | non-coding | upstream | 267881 | 22319355 ~ 22319576 (-) |
LOC118946878 | NA | other | downstream | 287888 | 21744425 ~ 21755710 (-) |
G235092 | LOC100194668 | other | downstream | 299978 | 21738845 ~ 21743411 (-) |
G234621 | NA | other | downstream | 544557 | 21498408 ~ 21498832 (-) |
G234600 | NA | other | downstream | 573444 | 21469661 ~ 21469945 (-) |
LOC110513321 | LOC106580205 | other | downstream | 587673 | 21438546 ~ 21455972 (-) |
G235881 | NA | other | upstream | 522359 | 22573833 ~ 22574989 (-) |
G237047 | NA | other | upstream | 1105635 | 23157109 ~ 23189031 (-) |
LOC110514600 | ensa | other | upstream | 1720050 | 23771511 ~ 23780158 (-) |
G237657 | LOC106605316 | other | upstream | 2129082 | 24180556 ~ 24183964 (-) |
G237832 | NA | other | upstream | 2469745 | 24521219 ~ 24521544 (-) |