LOC110513910 (LOC106605373)


Basic Information

Item Value
gene id LOC110513910
gene name LOC106605373
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 22324722 ~ 22336054 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021593560.2
gggggggggggggggtggtagaaAAAGGGTGGAAAATAATACCGGTGTAATTGGTTGAGGGGGAAGTGGAAAGAGGATTGTGGGAGACAAAGGGAatacagtgggagagagagaatgcgtGGTCAAAGTGAAACAATGCAGGTTGGACAATGCAGGTTTGATAGGAGACAGAAGTGGGGTCATTTAGGCATATGAAAGGAGATAGGGCTAAGTAATAAGGCTCTGATCAATTCTATTGATCTGGCTTTCTCTGCACCGGTGCAATGAACAAATGACCTCATTGACCTAGAGATTCATGAGTTTGTTAAAGAAATGGCTTTGAAAAGACCACAAGGGGACATGTATGTTCATGTCCATGGCCTCTCCACTCAATATCAGGCCATATAAAGTCAATAAATCGTATCTAGTCAGCACAGTCTCTCGGTGCATATCAGACCAACCACTGACCGTCTCCAATGAATTGACCTTATTTTTCACCCAATCGACATTGCTTCAGAAATCCTTATGGATTTGTTTTGCATGAAATGCATGCACCTTTCTCCTATATGGCCTTATGGTACTGTACTACTAGTGGTGTTGTACCAACTGTTCATTCCTCTCTAGCATGACTCTTTGGGAGTTGGCACATTTTCTGAAAGGTCAGGGGGTCATCAACGCCATCAACCTGGATGGGGGTGGTTCCTCCACTTACGTGGCAAATGGCTCATTGACCTGCTACCCCTCAGACCACTGTGTCTCAGACCCCATGTGGTGCTGCCCTCAGCGGGTCTCCACCATCCTGTGTGTCCACCATCCTGTGTGTCCACCATCCTGTGTGTCCACCAGCCCCAGTGCCAGCCTGAGGACTGCAGCGGTCACGGGATGTACATCGATGGGCACTGCCAATGCCAGGAGGGCTGGAGTGggactggctgtgacaacctggtGTGCCAACTGCCCGCCTGCGGTGCCCACGGTGTCTGTACACAGGATGGCTGTGCGTGTGATGCTGGATGGAGAGGGGAGAACTGCGGCCAAGTGTGTGATTTGGGTTTCTATGGTGACGGCTGCACTAACGGGGGCTCGTGTGACCCTGTTTACGGTGGCTGCAGCTGCCCCATTGGTTTCCATGGTGAATCCTGTGAACAAGCTGGCCATTGTCTTGCCAATCAGATGTTTgcaacatggagagaggaggagacacacAAATCCAAGCCTTATCTCTGAGCAGCGCTTGCTCATTGTCACTGGCCTGTGGACCTTTTCTGCTGTTGGCCAGCCTGGTGGGTCACCTGATCAAGATGTGTCGGGGGTCCGCGGCTCACCACCCCGGCCGTGTGGACAACTCCTACGTTTCTCCGACAGAGATCAATGGTGGTGTGTGCGGTTCAGGGGTCAGAGGGAAAGGGTCGCAGCCCAACAGAGGAGTAATCGGGATGGAGGACTGACTCCCAGGATGAACTGTGGTCGTGTGCGCGCTGAGGGAGGGTGATGGGGGATGGGTGGGAGTGAGCCTACCCTGTTA
>XM_036972158.1
gggggggggggggggtggtagaaAAAGGGTGGAAAATAATACCGGTGTAATTGGTTGAGGGGGAAGTGGAAAGAGGATTGTGGGAGACAAAGGGAatacagtgggagagagagaatgcgtGGTCAAAGTGAAACAATGCAGGTTGGACAATGCAGGTTTGATAGGAGACAGAAGTGGGGTCATTTAGGCATATGAAAGGAGATAGGGCTAAGTAATAAGGCTCTGATCAATTCTATTGATCTGGCTTTCTCTGCACCGGTGCAATGAACAAATGACCTCATTGACCTAGAGATTCATGAGTTTGTTAAAGAAATGGCTTTGAAAAGACCACAAGGGGACATGTATGTTCATGTCCATGGCCTCTCCACTCAATATCAGGCCATATAAAGTCAATAAATCGTATCTAGTCAGCACAGTCTCTCGGTGCATATCAGACCAACCACTGACCGTCTCCAATGAATTGACCTTATTTTTCACCCAATCGACATTGCTTCAGAAATCCTTATGGATTTGTTTTGCATGAAATGCATGCACCTTTCTCCTATATGGCCTTATGGTACTGTACTACTAGTGGTGTTGTACCAACTGTTCATTCCTCTCTAGCATGACTCTTTGGGAGTTGGCACATTTTCTGAAAGGTCAGGGGGTCATCAACGCCATCAACCTGGATGGGGGTGGTTCCTCCACTTACGTGGCAAATGGCTCATTGACCTGCTACCCCTCAGACCACTGTGTCTCAGACCCCATGTGGTGCTGCCCTCAGCGGGTCTCCACCATCCTGTGTGTCCACCATCCTGTGTGTCCACCATCCTGTGTGTCCACCAGCCCCAGTGCCAGCCTGAGGACTGCAGCGGTCACGGGATGTACATCGATGGGCACTGCCAATGCCAGGAGGGCTGGAGTGggactggctgtgacaacctggtGTGCCAACTGCCCGCCTGCGGTGCCCACGGTGTCTGTACACAGGATGGCTGTGCGTGTGATGCTGGATGGAGAGGGGAGAACTGCGGCCAAGCTGGCCATTGTCTTGCCAATCAGATGTTTgcaacatggagagaggaggagacacacAAATCCAAGCCTTATCTCTGAGCAGCGCTTGCTCATTGTCACTGGCCTGTGGACCTTTTCTGCTGTTGGCCAGCCTGGTGGGTCACCTGATCAAGATGTGTCGGGGGTCCGCGGCTCACCACCCCGGCCGTGTGGACAACTCCTACGTTTCTCCGACAGAGATCAATGGTGGTGTGTGCGGTTCAGGGGTCAGAGGGAAAGGGTCGCAGCCCAACAGAGGAGTAATCGGGATGGAGGACTGACTCCCAGGATGAACTGTGGTCGTGTGCGCGCTGAGGGAGGGTGATGGGGGATGGGTGGGAGTGAGCCTACCCTGTTA

Function

NR:

description
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021593560.2 False 1504 mRNA 0.52 6 22324722 22336054
XM_036972158.1 True 1393 mRNA 0.52 5 22324722 22336054

Neighbor

gene id symbol gene type direction distance location
LOC110513844 LOC106581355 coding downstream 7189 22305939 ~ 22317533 (-)
LOC110513832 ccne2 coding downstream 22708 22294867 ~ 22302014 (-)
LOC110513818 gbp coding downstream 233394 22089856 ~ 22091328 (-)
LOC110513791 LOC106580504 coding downstream 273248 22043389 ~ 22051474 (-)
LOC118944504 LOC106605473 coding downstream 283838 22039478 ~ 22040884 (-)
LOC110513923 LOC106605373 coding upstream 408 22336462 ~ 22341729 (-)
trnas-aga-55 NA coding upstream 108036 22444090 ~ 22444171 (-)
trnas-aga-56 NA coding upstream 108228 22444282 ~ 22444363 (-)
trnas-aga-57 NA coding upstream 109438 22445492 ~ 22445573 (-)
trnae-cuc-2 NA coding upstream 110690 22446744 ~ 22446815 (-)
G235779 NA non-coding downstream 1284 22322165 ~ 22323438 (-)
G235794 NA non-coding downstream 5146 22319355 ~ 22319576 (-)
G235793 NA non-coding downstream 5557 22318926 ~ 22319165 (-)
G235785 LOC106580611 non-coding downstream 39946 22283880 ~ 22284776 (-)
G235750 LOC106580611 non-coding downstream 82790 22241024 ~ 22241932 (-)
G235740 LOC106581338 non-coding upstream 8110 22344164 ~ 22347983 (-)
G235801 NA non-coding upstream 21324 22357378 ~ 22357604 (-)
G235805 NA non-coding upstream 24620 22360674 ~ 22360888 (-)
G235810 NA non-coding upstream 28495 22364549 ~ 22364762 (-)
G235809 LOC106955111 non-coding upstream 29057 22365111 ~ 22366009 (-)
LOC118946878 NA other downstream 569221 21744425 ~ 21755710 (-)
G235092 LOC100194668 other downstream 581311 21738845 ~ 21743411 (-)
G234621 NA other downstream 825890 21498408 ~ 21498832 (-)
G234600 NA other downstream 854777 21469661 ~ 21469945 (-)
LOC110513321 LOC106580205 other downstream 869006 21438546 ~ 21455972 (-)
G235881 NA other upstream 237779 22573833 ~ 22574989 (-)
G237047 NA other upstream 821055 23157109 ~ 23189031 (-)
LOC110514600 ensa other upstream 1435470 23771511 ~ 23780158 (-)
G237657 LOC106605316 other upstream 1844502 24180556 ~ 24183964 (-)
G237832 NA other upstream 2185165 24521219 ~ 24521544 (-)

Expression


Co-expression Network