Gene
RNA
| Item | Value |
|---|---|
| gene id | trnas-aga-55 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 22444090 ~ 22444171 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnas-aga-55 | True | 82 | mRNA | 0.54 | 1 | 22444090 | 22444171 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513923 | LOC106605373 | coding | downstream | 102361 | 22336462 ~ 22341729 (-) |
| LOC110513910 | LOC106605373 | coding | downstream | 108036 | 22324722 ~ 22336054 (-) |
| LOC110513844 | LOC106581355 | coding | downstream | 126557 | 22305939 ~ 22317533 (-) |
| LOC110513832 | ccne2 | coding | downstream | 142076 | 22294867 ~ 22302014 (-) |
| LOC110513818 | gbp | coding | downstream | 352762 | 22089856 ~ 22091328 (-) |
| trnas-aga-56 | NA | coding | upstream | 111 | 22444282 ~ 22444363 (-) |
| trnas-aga-57 | NA | coding | upstream | 1321 | 22445492 ~ 22445573 (-) |
| trnae-cuc-2 | NA | coding | upstream | 2573 | 22446744 ~ 22446815 (-) |
| LOC110503922 | LOC106605367 | coding | upstream | 2956 | 22447092 ~ 22449700 (-) |
| LOC110514021 | LOC106581291 | coding | upstream | 13241 | 22457412 ~ 22460489 (-) |
| G235846 | NA | non-coding | downstream | 15566 | 22428231 ~ 22428524 (-) |
| G235843 | NA | non-coding | downstream | 19561 | 22424213 ~ 22424529 (-) |
| G235809 | LOC106955111 | non-coding | downstream | 78081 | 22365111 ~ 22366009 (-) |
| G235810 | NA | non-coding | downstream | 79328 | 22364549 ~ 22364762 (-) |
| G235805 | NA | non-coding | downstream | 83202 | 22360674 ~ 22360888 (-) |
| snrnp48 | LOC106581266 | non-coding | upstream | 50879 | 22488821 ~ 22495924 (-) |
| G235860 | NA | non-coding | upstream | 81232 | 22525403 ~ 22526021 (-) |
| G235900 | NA | non-coding | upstream | 138654 | 22582825 ~ 22584854 (-) |
| G235916 | NA | non-coding | upstream | 155659 | 22599830 ~ 22600792 (-) |
| LOC118946878 | NA | other | downstream | 688589 | 21744425 ~ 21755710 (-) |
| G235092 | LOC100194668 | other | downstream | 700679 | 21738845 ~ 21743411 (-) |
| G234621 | NA | other | downstream | 945258 | 21498408 ~ 21498832 (-) |
| G234600 | NA | other | downstream | 974145 | 21469661 ~ 21469945 (-) |
| LOC110513321 | LOC106580205 | other | downstream | 988374 | 21438546 ~ 21455972 (-) |
| G235881 | NA | other | upstream | 129662 | 22573833 ~ 22574989 (-) |
| G237047 | NA | other | upstream | 712938 | 23157109 ~ 23189031 (-) |
| LOC110514600 | ensa | other | upstream | 1327353 | 23771511 ~ 23780158 (-) |
| G237657 | LOC106605316 | other | upstream | 1736385 | 24180556 ~ 24183964 (-) |
| G237832 | NA | other | upstream | 2077048 | 24521219 ~ 24521544 (-) |
