LOC110505130


Basic Information

Item Value
gene id LOC110505130
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 22547800 ~ 22548892 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002470693.2
GCTTGTGTATTAATTTGCCTGTAACTAAATCAGAATTCCATTATGTTTACATAAAAAAGAGAATCCTTCAAAATGAGAAGATCCTGCTATGGAAAAGATGACTGGGTGGAAAGGAGTGGAAAGTGGAAAGGAGGGGAAATAACTCCCACCATGCAGCAGGACACCTTCAGCTGTGGGGTCTTTGTAATGCAGCTGGTCAAGGAAGTTGCACAGAACTTCCCCAACATCCCCTCCCAAATTGATATGGAACCTTCAAAAACACATGGAGCAACTACGAAAATAAATGGCTGAGGATATACTAAAAATGTCTGAGTTCAACAAAGCCAACAACTGCTTCATGTGTGCCACTGATAAAGAACCTGGATGTGGCCCAAAGACTGACTGGATTGCATGTTTTGCATACCAACGGTGGTTCCATGTGATGTCACTAGGAATGAAGACAAAATAGTTCAGAGTAAAGAACACAAACTGGAAGTGCAGTCTTTGTTGTTGGAAATGTATGCTTATaccccatccacactgaagaggctctgaCATGTACATCAAACAGGAATAAAGAGAAAGTTAACTTCAAATAAGTATGAAACATTTCAGTGTTACGTGTCTGTTGACATGTTGGAAAAGATTAAAGGTCTACAATTTCTGTTTAATTTGTCAATATTACATTTGTATTCATTGATTTACTGGCCACCATTACTGTGGTTacatgttcagtatatgtattgaccAGCAAGCCACtgcagcctacctcaccagctcactct

Function

NR:

description
PREDICTED: uncharacterized protein LOC108259607 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002470693.2 True 764 mRNA 0.40 4 22547800 22548892

Neighbor

gene id symbol gene type direction distance location
LOC110514079 LOC106605359 coding downstream 41122 22499445 ~ 22506678 (-)
snrnp48 LOC106581266 coding downstream 51896 22488821 ~ 22495924 (-)
LOC110513982 LOC106581283 coding downstream 59778 22462380 ~ 22488022 (-)
LOC110514021 LOC106581291 coding downstream 87311 22457412 ~ 22460489 (-)
LOC110503922 LOC106605367 coding downstream 98100 22447092 ~ 22449700 (-)
LOC110514133 LOC106581253 coding upstream 27055 22575947 ~ 22603330 (-)
LOC110514157 LOC106581233 coding upstream 59712 22608604 ~ 22611971 (-)
bmper LOC106581223 coding upstream 69202 22618094 ~ 22641761 (-)
bbs9 bbs9 coding upstream 94949 22643841 ~ 22848755 (-)
trnap-agg-7 NA coding upstream 300332 22849224 ~ 22849295 (-)
G235860 NA non-coding downstream 21779 22525403 ~ 22526021 (-)
G235846 NA non-coding downstream 119276 22428231 ~ 22428524 (-)
G235843 NA non-coding downstream 123271 22424213 ~ 22424529 (-)
G235900 NA non-coding upstream 33933 22582825 ~ 22584854 (-)
G235916 NA non-coding upstream 50938 22599830 ~ 22600792 (-)
G235921 NA non-coding upstream 58985 22607877 ~ 22608110 (-)
G235959 NA non-coding upstream 123383 22672275 ~ 22698611 (-)
G235938 NA non-coding upstream 133377 22682269 ~ 22685521 (-)
LOC118946878 NA other downstream 792299 21744425 ~ 21755710 (-)
G235092 LOC100194668 other downstream 804389 21738845 ~ 21743411 (-)
G234621 NA other downstream 1048968 21498408 ~ 21498832 (-)
G234600 NA other downstream 1077855 21469661 ~ 21469945 (-)
LOC110513321 LOC106580205 other downstream 1092084 21438546 ~ 21455972 (-)
G235881 NA other upstream 24941 22573833 ~ 22574989 (-)
G237047 NA other upstream 608217 23157109 ~ 23189031 (-)
LOC110514600 ensa other upstream 1222632 23771511 ~ 23780158 (-)
G237657 LOC106605316 other upstream 1631664 24180556 ~ 24183964 (-)
G237832 NA other upstream 1972327 24521219 ~ 24521544 (-)

Expression


Co-expression Network