LOC110514114 (can7)


Basic Information

Item Value
gene id LOC110514114
gene name can7
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 22557122 ~ 22575110 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021593667.2
GCTCTCGTCATCGTTGGAGCTACCCGGAAGCTAAATCTTGGAAatcacttgttgttgttgttatcgAGCAGAAAGTAGCTCGTCTACTTGCTAGCTgtatatcataatgttttacGGATATGGCTGTATGAAAAAACGTTAGAACAAAATGGATTGCACGGCACTGGAGCACGATGCAGTTAAATTTGCTAAAACTGCTGTCATCTGCGACCAGAATGGAAAATACAACGAGGCTGTCTTCTATTATAAGGAGGCGGCACAAGCCCTGATCTACGCCGGCATGGCAGGGTCTAAACTGGAGGGCATCCAGGATAAAGTCAATGAGTACCTGGACCGGGTTCAGGCCCTGCACAATGCTGTTCAAGCTCAAAGTAGCGATCCTCTGAAGAGCAAGCAGCAGGTGGATCTGGAGCGGGCCCACTTCCTGGTCACCCAGGCCTTTGAGGAGGATGAGAAGGGCAATGGGGACGAGGCCATCGAGCTCTACACACAGGGCGTGGAACTCTGCATCCAGACGTCTCATGATACAACAGACCAGGGGCTGCAGGGCAAACTGAAGCAGCTGGCTCGTCAGGCCCTCGATAGGGCGGAGGGGCTGAAGGAGTCCCAGTCCGCCAGTCCCTTAGCCCAGTCGCCACAGGACAGGCCGGGGCCCTCAGGGGCCAAACCTAGTGGGGGACCTTGCCCCGTCAGACAGTTCTTCCCCCTTGGACCTGACTTCTCCCTCCAGAACCGTCCCCAGCCAGTCAGGCCGGTCCAGTCCAGCGAGCCTCAGGGTCAGCGCTACACCTCAGAAGAGATCGAGGTGCTCAGGAGCACGTCCAAGATCAACGGCACACCCTTTGTCCCCTTCATGAGCGTGGACCTGAAGGAGAGATTTGCCTTTCCTGTTCCATTCTCGGACAAACTAGGCAAGCTGGCCCTGTCTCCCAAGCAGAGAACCATCTTCTCCCGCTGGGTTCGCCCTGACGAGATCTGCAATAACCCCACCATGATCTTATCTGTGTCCAGCTTCAGCATCAAACAGACGGTGGTGTCTGACTGCTCGTTCGTGGCGTCGTTAGCCATCAGCGCTGCCTATGAGCGACGCTACAACAAGAAGCTCATCACCAGCATCATCTACCCCCAGAACCGGCGCGGGGAGCCAGAGTATAACCCCTGTGGGAAGTACATGGTGAAGCTTCACATCAACGGTGTGCCCAGGAAGGTCATTATAGACGACTTCCTGCCATGTGGTCAGAATGGAGAGCTGCTGTGTTCCTACTCCAGCAACAGGAACGAGCTGTGGGTCTCCCTCATAGAGAAGGCCTACATGAAGGTCATGGGAGGCTATGACTTCCCCGGCTCCAACTCGAACATCGATCTGCACGCACTCACTGGCTGGATCCCAGAGCGTATCGCCATGCATTCAGACAATCAGTCATTCATCAAGGACGACACCTTCCGCATGCTCTACCAGAGGTTTCACCGGGGCGACGTCTTAATCACCACAGCAACGGGGGTGATGACAGAGGAGGAAGGCGAGAGGTGGGGCCTTGTGCCAACGCATGCCTACGCTGTCCTGGATATCCGGGAGCACAAAGGGAAGCGGTTCCTGCAGCTGAAGAACCCGTGGAGCCACCTGAGGTGGAAAGGTCGCTTCAGTGAACGGGACGAGAAAAACTGGACCCCAGAACTTCTCAAATACCTCAACTTTGACCCCAAGACCGCACAGAAGTTTGATAACGGTGTGTTCTGGATCACGTTTGAGGACCTGTGCCAGTACTATGATGTCATCTACCTGAGCTGGAGCCCCGCCCTGTTCAGAGAGTCTTCCTGTATCCATAGTAGCTGGGATGGGAAGCAGGGCCCGGTGAAGGATGCCTACAGTCTGGCCAACAACCCTCAGTACCGGCTGGAGGTGACCTGTCCTGCAGGGGGCACCGCTGTCTGGGTGCTGCTGACCAGACACATCACTGACAAGGACGACTTTGCACAAAACAGGGAGTTCATCACCTTGGTGGTTTACAAGACAGAGGGAAAGAAAGTTTACTACCCTGCGGACCCTCCCCCCTACATAGATGGGATCAGGATCAACAGCCCCCACTACCTGACCAAGATGAGACTAACCAGCGCtggaacacacacattcacactggtGGTGTCACAGTACGAGAAGCAGAACACCATCAACTACACCCTgaggGTCTACTCTGGATGCAAGTTCTCCTTCTCCAAGATCCCAACGCCCTTCACTCATACCAAACGGATCAATGGCCAGTGGAAAGGGCCGAGTGCGGGGGGCTGTGGGAACTACAAGGATTCGTACAAGCACAACCCCATCTACCAGTTTAACCTGGAGCGCCCAGGACCCATGCTCATAGAGCTACGAGGCTCCAGgcAGTACAGTGTGGGCTTTGAGATGGTGACTGTGTCCACTGTAGTAGAGCCAGGACCTGCAGGCCACCCGAAGAAGAACAGTGGAGACTACAGgtgtGGTTTCTGCTACATGGAGGCGGACCATGTCCCCGCTGGCATCTACAACGTCATCCCCACCACCTTCCTGCCCAAACAGGAAGGACCCTTCTTCCTGGACTTCAGCAGCACCACGCCCCTAAAGGTCTCCCAGCTCCAgtaaggagaggaaggaagggaaggatTCCGGTGTGACACCAGGAATAACTTGCTCACAACATGGACACTCACTTTTTCCTGAACTCTGGGTGGAACTTGTTACGACTGCAGGAGTACCCAAAAGACACTGATTTATTTTATTACCAAGGGTATTTGGAAAGGGACAAGTGTTTGGTATGGAACCTAGCCCTCTATGTGCTGAGGGGTGTGTAAGAACATgtaccaaaaaaatgtaaacTATCAGAGCGAATGTTGGAGGTGCTTCCATCCTCCTTTGCCATAATGACAGATACAGTAAATGATGTCACAACAACTATGGCCCTTATGATTTTCAATGTTCAATTACTTGGTGCTTGTTGACCACCAGTCTAGGTACTCGAGGCAGTGCTGGTATTTACCAAGAACGAAGGGTGATGTTCTCAACTGCAACCGCTACTGTCTTTTTCTCAGGAGACCGCACCACGACAGGGATTTCTCTGTTGCACAGGAATGTGACACAGGCATGAAGACTAATCTTTGGTATTTCTAAGGATGCGTGACACAGGCATGCAGGACGTGTGTGTGGTTGCAAAATTCTAGGAACTTttaataaattccctggttttccagattCCTGGAATCCTCCAACTGGGATTTAGGGAAAACCAAGGAATTTATAAGTTCCTGGAattttgcttgtgtgtgtgtgtactcgcaTGGAAAACGACATTTGAAACGTATCGCCAATCTTCAGTCTCTTGTTTACACTTCAGCAAGGACTTGAACACTTCACAGCGGATTCTCCTTCTCTGTTAACATTTTGTCAAACAGGCAAGACTGCTAGTGGCTTTGTCATTTTCTGGACAATTACTGTGAAGTGTCAATGCTATACAGTCTTGTGGACAAGACCCACTCCTCAAACatactttattttttacaaaggAAAGCATGGACTTTCCTTTGCATTAACAAAATGGCTGCTCTTTGTCGTTTCATTCTTCTTTACGTAGAATTACATTTGTTTTCTTCCCCCTCCAGTGACTTAAAGGGCAACTAATTGCTGCTGTTGCCACTTATGTCAAATGCAATAGTCTTGTATGATTTTGCTTAACTTGCACTAAATATGGAATGATGTATTCAAACATGGCATTGAAGGAAATCAGAAAaa
>XM_021593660.2
GAAatcacttgttgttgttgttatcgAGCAGAAAGTAGCTCGTCTACTTGCTAGCTgtatatcataatgttttacGGATATGGTGGTTGTTTGTATTCCATTCATTTTATGATCTTATTTTAAAAACCCATATTTTGGGACTGTAACTCATTGCTTTGATTTAGCTGTCTAACGTTCTGTCAAGTTCGGCTTGCTAGCTAACGccgctagctagttaacgttagttaCGAATGACAGGGACAGTCATATTTTCCAGGCTGTATGAAAAAACGTTAGAACAAAATGGATTGCACGGCACTGGAGCACGATGCAGTTAAATTTGCTAAAACTGCTGTCATCTGCGACCAGAATGGAAAATACAACGAGGCTGTCTTCTATTATAAGGAGGCGGCACAAGCCCTGATCTACGCCGGCATGGCAGGGTCTAAACTGGAGGGCATCCAGGATAAAGTCAATGAGTACCTGGACCGGGTTCAGGCCCTGCACAATGCTGTTCAAGCTCAAAGTAGCGATCCTCTGAAGAGCAAGCAGCAGGTGGATCTGGAGCGGGCCCACTTCCTGGTCACCCAGGCCTTTGAGGAGGATGAGAAGGGCAATGGGGACGAGGCCATCGAGCTCTACACACAGGGCGTGGAACTCTGCATCCAGACGTCTCATGATACAACAGACCAGGGGCTGCAGGGCAAACTGAAGCAGCTGGCTCGTCAGGCCCTCGATAGGGCGGAGGGGCTGAAGGAGTCCCAGTCCGCCAGTCCCTTAGCCCAGTCGCCACAGGACAGGCCGGGGCCCTCAGGGGCCAAACCTAGTGGGGGACCTTGCCCCGTCAGACAGTTCTTCCCCCTTGGACCTGACTTCTCCCTCCAGAACCGTCCCCAGCCAGTCAGGCCGGTCCAGTCCAGCGAGCCTCAGGGTCAGCGCTACACCTCAGAAGAGATCGAGGTGCTCAGGAGCACGTCCAAGATCAACGGCACACCCTTTGTCCCCTTCATGAGCGTGGACCTGAAGGAGAGATTTGCCTTTCCTGTTCCATTCTCGGACAAACTAGGCAAGCTGGCCCTGTCTCCCAAGCAGAGAACCATCTTCTCCCGCTGGGTTCGCCCTGACGAGATCTGCAATAACCCCACCATGATCTTATCTGTGTCCAGCTTCAGCATCAAACAGACGGTGGTGTCTGACTGCTCGTTCGTGGCGTCGTTAGCCATCAGCGCTGCCTATGAGCGACGCTACAACAAGAAGCTCATCACCAGCATCATCTACCCCCAGAACCGGCGCGGGGAGCCAGAGTATAACCCCTGTGGGAAGTACATGGTGAAGCTTCACATCAACGGTGTGCCCAGGAAGGTCATTATAGACGACTTCCTGCCATGTGGTCAGAATGGAGAGCTGCTGTGTTCCTACTCCAGCAACAGGAACGAGCTGTGGGTCTCCCTCATAGAGAAGGCCTACATGAAGGTCATGGGAGGCTATGACTTCCCCGGCTCCAACTCGAACATCGATCTGCACGCACTCACTGGCTGGATCCCAGAGCGTATCGCCATGCATTCAGACAATCAGTCATTCATCAAGGACGACACCTTCCGCATGCTCTACCAGAGGTTTCACCGGGGCGACGTCTTAATCACCACAGCAACGGGGGTGATGACAGAGGAGGAAGGCGAGAGGTGGGGCCTTGTGCCAACGCATGCCTACGCTGTCCTGGATATCCGGGAGCACAAAGGGAAGCGGTTCCTGCAGCTGAAGAACCCGTGGAGCCACCTGAGGTGGAAAGGTCGCTTCAGTGAACGGGACGAGAAAAACTGGACCCCAGAACTTCTCAAATACCTCAACTTTGACCCCAAGACCGCACAGAAGTTTGATAACGGTGTGTTCTGGATCACGTTTGAGGACCTGTGCCAGTACTATGATGTCATCTACCTGAGCTGGAGCCCCGCCCTGTTCAGAGAGTCTTCCTGTATCCATAGTAGCTGGGATGGGAAGCAGGGCCCGGTGAAGGATGCCTACAGTCTGGCCAACAACCCTCAGTACCGGCTGGAGGTGACCTGTCCTGCAGGGGGCACCGCTGTCTGGGTGCTGCTGACCAGACACATCACTGACAAGGACGACTTTGCACAAAACAGGGAGTTCATCACCTTGGTGGTTTACAAGACAGAGGGAAAGAAAGTTTACTACCCTGCGGACCCTCCCCCCTACATAGATGGGATCAGGATCAACAGCCCCCACTACCTGACCAAGATGAGACTAACCAGCGCtggaacacacacattcacactggtGGTGTCACAGTACGAGAAGCAGAACACCATCAACTACACCCTgaggGTCTACTCTGGATGCAAGTTCTCCTTCTCCAAGATCCCAACGCCCTTCACTCATACCAAACGGATCAATGGCCAGTGGAAAGGGCCGAGTGCGGGGGGCTGTGGGAACTACAAGGATTCGTACAAGCACAACCCCATCTACCAGTTTAACCTGGAGCGCCCAGGACCCATGCTCATAGAGCTACGAGGCTCCAGgcAGTACAGTGTGGGCTTTGAGATGGTGACTGTGTCCACTGTAGTAGAGCCAGGACCTGCAGGCCACCCGAAGAAGAACAGTGGAGACTACAGgtgtGGTTTCTGCTACATGGAGGCGGACCATGTCCCCGCTGGCATCTACAACGTCATCCCCACCACCTTCCTGCCCAAACAGGAAGGACCCTTCTTCCTGGACTTCAGCAGCACCACGCCCCTAAAGGTCTCCCAGCTCCAgtaaggagaggaaggaagggaaggatTCCGGTGTGACACCAGGAATAACTTGCTCACAACATGGACACTCACTTTTTCCTGAACTCTGGGTGGAACTTGTTACGACTGCAGGAGTACCCAAAAGACACTGATTTATTTTATTACCAAGGGTATTTGGAAAGGGACAAGTGTTTGGTATGGAACCTAGCCCTCTATGTGCTGAGGGGTGTGTAAGAACATgtaccaaaaaaatgtaaacTATCAGAGCGAATGTTGGAGGTGCTTCCATCCTCCTTTGCCATAATGACAGATACAGTAAATGATGTCACAACAACTATGGCCCTTATGATTTTCAATGTTCAATTACTTGGTGCTTGTTGACCACCAGTCTAGGTACTCGAGGCAGTGCTGGTATTTACCAAGAACGAAGGGTGATGTTCTCAACTGCAACCGCTACTGTCTTTTTCTCAGGAGACCGCACCACGACAGGGATTTCTCTGTTGCACAGGAATGTGACACAGGCATGAAGACTAATCTTTGGTATTTCTAAGGATGCGTGACACAGGCATGCAGGACGTGTGTGTGGTTGCAAAATTCTAGGAACTTttaataaattccctggttttccagattCCTGGAATCCTCCAACTGGGATTTAGGGAAAACCAAGGAATTTATAAGTTCCTGGAattttgcttgtgtgtgtgtgtactcgcaTGGAAAACGACATTTGAAACGTATCGCCAATCTTCAGTCTCTTGTTTACACTTCAGCAAGGACTTGAACACTTCACAGCGGATTCTCCTTCTCTGTTAACATTTTGTCAAACAGGCAAGACTGCTAGTGGCTTTGTCATTTTCTGGACAATTACTGTGAAGTGTCAATGCTATACAGTCTTGTGGACAAGACCCACTCCTCAAACatactttattttttacaaaggAAAGCATGGACTTTCCTTTGCATTAACAAAATGGCTGCTCTTTGTCGTTTCATTCTTCTTTACGTAGAATTACATTTGTTTTCTTCCCCCTCCAGTGACTTAAAGGGCAACTAATTGCTGCTGTTGCCACTTATGTCAAATGCAATAGTCTTGTATGATTTTGCTTAACTTGCACTAAATATGGAATGATGTATTCAAACATGGCATTGAAGGAAATCAGAAAaa

Function

NR:

description
calpain-7-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0004198 calcium-dependent cysteine-type endopeptidase activity molecular_function

KEGG:

id description
K08576 CAPN7; calpain-7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021593667.2 False 3760 mRNA 0.51 20 22557122 22575110
XM_021593660.2 True 3894 mRNA 0.50 19 22557162 22575110

Neighbor

gene id symbol gene type direction distance location
LOC110514095 LOC106581260 coding upstream 13023 22513124 ~ 22544099 (+)
LOC118947118 NA coding upstream 70606 22482472 ~ 22488203 (+)
LOC110514034 NA coding upstream 84983 22460524 ~ 22472917 (+)
LOC110513964 LOC106605368 coding upstream 115657 22430621 ~ 22441465 (+)
LOC110513938 plekhf2 coding upstream 152305 22376761 ~ 22404817 (+)
LOC110514168 LOC106581241 coding downstream 36926 22612036 ~ 22618089 (+)
LOC110514282 LOC106581183 coding downstream 294630 22869740 ~ 22893776 (+)
LOC110514335 LOC106581155 coding downstream 544273 23119383 ~ 23133074 (+)
smarcc1a LOC106605342 coding downstream 635308 23210418 ~ 23227568 (+)
LOC110514420 LOC106581064 coding downstream 661152 23236262 ~ 23290996 (+)
G235495 LOC106581291 non-coding upstream 96656 22459160 ~ 22460466 (+)
G235496 NA non-coding upstream 98032 22457195 ~ 22459090 (+)
G235484 NA non-coding upstream 115039 22441825 ~ 22442083 (+)
G235450 NA non-coding upstream 133016 22366840 ~ 22424106 (+)
G235545 NA non-coding downstream 4368 22579478 ~ 22579807 (+)
G235563 NA non-coding downstream 30793 22605903 ~ 22606114 (+)
G235564 NA non-coding downstream 31275 22606385 ~ 22606585 (+)
G235569 NA non-coding downstream 98415 22673525 ~ 22685509 (+)
G235426 LOC106581355 other upstream 252216 22303641 ~ 22304906 (+)
LOC110503910 LOC106580557 other upstream 489042 22057484 ~ 22068080 (+)
kiaa0319 LOC106580477 other upstream 537138 22017579 ~ 22037490 (+)
G234340 LOC106580151 other upstream 1270120 21286726 ~ 21287002 (+)
G235571 NA other downstream 97626 22672736 ~ 22698834 (+)
G236271 LOC106581124 other downstream 574042 23144516 ~ 23191853 (+)
G236301 NA other downstream 623742 23198852 ~ 23199075 (+)
G236370 LOC106581434 other downstream 771770 23346880 ~ 23349378 (+)

Expression


Co-expression Network