LOC110503928 (LOC106581194)


Basic Information

Item Value
gene id LOC110503928
gene name LOC106581194
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 22849505 ~ 22866403 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036972414.1
TTCTTCACTTGTTTTGCACAAGACCAGAGGAAAAGatGCCAGAGTTTGAGAAGAACACGGTCCACATGAGGGATCCAGAGCGGGTGGAGCAGATCATCTGTGGCATGATCAAGGGTGGCGCCTCCAAACTACAGGTCATCACTGACTTTGACATGACGTTAAGCCGGTTCGCAGTCAACGGCAAACGCTGCCCCACGTGTCATAATATCATTGACAACTGCAAGCTTGTCACCGAAGATTGTAGGACGAAGTTACTAGAGCTTAAGAACACATATTACCCCATAGAGATCGACCCCCATCTAACGATGGAGGAGAAGTATCCATTTATGGTAGAATGGTATTTTAAGTCCCACACATTACTGGTGGAGCAGAGGCTACAGAAGGACAAACTCTCAGAGGTGGTGAGAGACTCGGACGCCTGCCTGAGGGAGGGCTATGAGCCATTCTTTGACCGGCTCCAGCAGCACAACGTGCCCGTGTTCATCTTCTCAGCGGGTCTGGGAGACGTCCTGGAGGAGATCATCCACCAGGCGGGGGTCTACCACCCCAACGTCAAGGTGGTGTCCAACTTCATGGACTTCGACGAGAATGGCGAGCTGAGGGGCTTCAAAGGAGAGCTGATCCATGTGTTCAACAAGCACGACGGCGCCCTGCGCAACACGGAGTACTTCAAACAGGTGAAGGACAACTGCAACATCGTGCTGCTGGGAGACTCATTAGGTGACCTCAACATGGCTGACGGCGTGCCCAATGTGGAGAACATCCTCAAGATCGGCTTCCTCAACGACAAGGTGGAGGATCGTTTGGAGAAATATCTGGACTCTTATGACATCGTCCTGGTAAAGGACGAGACTTTAGATGTGCCCAATTCCATCCTTCAGAAGATTATATAACCCCCCCCACTTCATACTGACACACTTCCCCAAACCCATGGAAAATGAACCAACCTCTGGACTCCCAAGACAGATTTTACTGCCCCCCCCCCGCCACTGACTCACAGCCTCTCGACATACACTAGCTTTATATTCTCCTCTCAATGAACTATTTTAAAGTACACAGCCTCAGTCTTTGTCTGTCTGCAACCTTGTCGACGTCCTCCACTCCATAACAATAATTTGCACGTTATTGTTATtcataatatttttttatattgtaaTGCTTGTATCAGTTTGCAAATCATAAACCGAGCATCCACACAAGAACACAGCAACGTCTTTTGAAACGGTCCTAGCATGCATTTCACCACAATCACCTCATTGCATTCTGCAACAGTTTGGCTACAGGAATCAATGTAGGTCTGAAAAAATAACTTGAACCTGTCTATGGGTGAACAATACTCAGACATTGGTATGAATATTATCACTGGTTTTATGGATGTAGTAATGGATTCTGTCTTGCAGAAGAGAAGCCATGTATACACCTCATCAGTGTTCACATGGGGACTTTGCTACCATAGCCACACTGCAAAGTAGCACATTATTTTATAGGAGTACTAACACTGCACATTTTCTGTGCCATGTAAATAGACTGCATGGTTGTTACCCTATGGTGCTTATATCAAGAAATTAAACAATTGTCAATGAGTTGAGATAATAGTAGTAACTAGTGGTGCTAAAGTTTTTTATAAATGATGGGTTACTACTGTTAGTGTAACTGACTTTATGAACAATATAGTGTCAAATAAGGTGCTACCAAAAGTCATTACACAGAGGAAAAGTAGCCTGCTCAATTGGCAGTATATTACAAGAGAACACCACTGGGTAAAGCACCGTTGTCTGTGGATCAGCGAAGTTCAATAAGACTATTTTGTTTAACTTGGCCTTTTATCCACACCCATTGACCTGTTTTTAATTTTGTTGTTCAAATTTGAACTCTACCTCAAGCTTGGAAATgtttcctacccccccccccccctttaaatTTCTCAGTTTTGTCTTGCACATGTTCAATGTTAATTTTAAATTTTAGCATTTTAAATGTGCTGCTACTCCTGCACGTTGCCTTTTCTTAACTTTGAATTTGACAGAGGGGGGGAAACTTGTCAATAAAACTTGTCAAATAA
>XM_036972412.1
ACAATTTGGCAGCAGATGGGGGGAATTTTCATTGTAATTGATTAGTCCTTCTTGTCTAAAACTTGCACCATTGGTTATGTAGGTAAATCTTTTTCTGCAGACAATATCTGAAATGCAGACAAAAATATTGCGAAATACAGGCATACACCCTATCCTATTATTGGGCTATAGTAATGACTAATGTAATTAATTGTAATGAGTAATGTATTCTTATTAAATGTACGTATAGGCAAACATCTGTTTTGTTGGGGCTCGTTTCCATGGACGTGGTTCATACTAATTAGAAACAAATAATACGGAAACTGAAAATGTGTATCAATTTCTTCATTGTAGCATTTTACTCTATGCGTTACCAGCACAATTACAACAAATATTTGGGTTCGTTTGGTGAAATACCCCTGGATGATTAAAAGATGTTGGTATAAATACACATCAAACCCCCCGCTTTCACCCGAGTGGTAGCGATAGGAGGGCACGTACGTACGTAGTCCGTTACAGTCTCAGTCGCCAATCGACTCGAGGGAGGGACCATGTTGACATAAGGAAGGAGTAGAATCGTTTGTTTGGAGCGGCACAACCATGGACAAGACTGCCGTGGTAAAAGTCGGTGCCGCGGCCAGTGCCAGTGTATGTGCCCTGTTCGGAGGTGTGGTTCTCGCCCAGTACATGTTCGCCAAGAAGAAGAGAGCGGGAAAGAAAACGAAGATCATCGAGATGatGCCAGAGTTTGAGAAGAACACGGTCCACATGAGGGATCCAGAGCGGGTGGAGCAGATCATCTGTGGCATGATCAAGGGTGGCGCCTCCAAACTACAGGTCATCACTGACTTTGACATGACGTTAAGCCGGTTCGCAGTCAACGGCAAACGCTGCCCCACGTGTCATAATATCATTGACAACTGCAAGCTTGTCACCGAAGATTGTAGGACGAAGTTACTAGAGCTTAAGAACACATATTACCCCATAGAGATCGACCCCCATCTAACGATGGAGGAGAAGTATCCATTTATGGTAGAATGGTATTTTAAGTCCCACACATTACTGGTGGAGCAGAGGCTACAGAAGGACAAACTCTCAGAGGTGGTGAGAGACTCGGACGCCTGCCTGAGGGAGGGCTATGAGCCATTCTTTGACCGGCTCCAGCAGCACAACGTGCCCGTGTTCATCTTCTCAGCGGGTCTGGGAGACGTCCTGGAGGAGATCATCCACCAGGCGGGGGTCTACCACCCCAACGTCAAGGTGGTGTCCAACTTCATGGACTTCGACGAGAATGGCGAGCTGAGGGGCTTCAAAGGAGAGCTGATCCATGTGTTCAACAAGCACGACGGCGCCCTGCGCAACACGGAGTACTTCAAACAGGTGAAGGACAACTGCAACATCGTGCTGCTGGGAGACTCATTAGGTGACCTCAACATGGCTGACGGCGTGCCCAATGTGGAGAACATCCTCAAGATCGGCTTCCTCAACGACAAGGTGGAGGATCGTTTGGAGAAATATCTGGACTCTTATGACATCGTCCTGGTAAAGGACGAGACTTTAGATGTGCCCAATTCCATCCTTCAGAAGATTATATAACCCCCCCCACTTCATACTGACACACTTCCCCAAACCCATGGAAAATGAACCAACCTCTGGACTCCCAAGACAGATTTTACTGCCCCCCCCCCGCCACTGACTCACAGCCTCTCGACATACACTAGCTTTATATTCTCCTCTCAATGAACTATTTTAAAGTACACAGCCTCAGTCTTTGTCTGTCTGCAACCTTGTCGACGTCCTCCACTCCATAACAATAATTTGCACGTTATTGTTATtcataatatttttttatattgtaaTGCTTGTATCAGTTTGCAAATCATAAACCGAGCATCCACACAAGAACACAGCAACGTCTTTTGAAACGGTCCTAGCATGCATTTCACCACAATCACCTCATTGCATTCTGCAACAGTTTGGCTACAGGAATCAATGTAGGTCTGAAAAAATAACTTGAACCTGTCTATGGGTGAACAATACTCAGACATTGGTATGAATATTATCACTGGTTTTATGGATGTAGTAATGGATTCTGTCTTGCAGAAGAGAAGCCATGTATACACCTCATCAGTGTTCACATGGGGACTTTGCTACCATAGCCACACTGCAAAGTAGCACATTATTTTATAGGAGTACTAACACTGCACATTTTCTGTGCCATGTAAATAGACTGCATGGTTGTTACCCTATGGTGCTTATATCAAGAAATTAAACAATTGTCAATGAGTTGAGATAATAGTAGTAACTAGTGGTGCTAAAGTTTTTTATAAATGATGGGTTACTACTGTTAGTGTAACTGACTTTATGAACAATATAGTGTCAAATAAGGTGCTACCAAAAGTCATTACACAGAGGAAAAGTAGCCTGCTCAATTGGCAGTATATTACAAGAGAACACCACTGGGTAAAGCACCGTTGTCTGTGGATCAGCGAAGTTCAATAAGACTATTTTGTTTAACTTGGCCTTTTATCCACACCCATTGACCTGTTTTTAATTTTGTTGTTCAAATTTGAACTCTACCTCAAGCTTGGAAATgtttcctacccccccccccccctttaaatTTCTCAGTTTTGTCTTGCACATGTTCAATGTTAATTTTAAATTTTAGCATTTTAAATGTGCTGCTACTCCTGCACGTTGCCTTTTCTTAACTTTGAATTTGACAGAGGGGGGGAAACTTGTCAATAAAACTTGTCAAATAA

Function

NR:

description
PREDICTED: cytosolic 5'-nucleotidase 3-like isoform X1

GO:

id name namespace
GO:0016311 dephosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0008253 5'-nucleotidase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K24242 NT5C3; cytosolic 5'-nucleotidase 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036972414.1 False 2062 mRNA 0.44 9 22849505 22854858
XM_036972412.1 True 2744 mRNA 0.44 9 22849505 22866403

Neighbor

gene id symbol gene type direction distance location
trnap-agg-7 NA coding downstream 210 22849224 ~ 22849295 (-)
bbs9 bbs9 coding downstream 750 22643841 ~ 22848755 (-)
bmper LOC106581223 coding downstream 207744 22618094 ~ 22641761 (-)
LOC110514157 LOC106581233 coding downstream 237534 22608604 ~ 22611971 (-)
LOC110514133 LOC106581253 coding downstream 246175 22575947 ~ 22603330 (-)
LOC110514295 LOC106605350 coding upstream 1212 22867615 ~ 22869747 (-)
LOC110514303 prdm1 coding upstream 37326 22903729 ~ 22919447 (-)
LOC110514322 LOC106581161 coding upstream 171357 23037760 ~ 23051032 (-)
LOC110514382 NA coding upstream 272233 23138636 ~ 23140888 (-)
LOC118944658 LOC100136303 coding upstream 274431 23140834 ~ 23142966 (-)
G236049 NA non-coding downstream 352 22848844 ~ 22849153 (-)
G236003 NA non-coding downstream 78842 22769166 ~ 22770663 (-)
G235959 NA non-coding downstream 150894 22672275 ~ 22698611 (-)
G236082 NA non-coding upstream 30917 22897320 ~ 22897536 (-)
G236084 NA non-coding upstream 33314 22899717 ~ 22899933 (-)
G236085 NA non-coding upstream 34124 22900527 ~ 22900770 (-)
G236095 NA non-coding upstream 54435 22920838 ~ 22921076 (-)
G235881 NA other downstream 274516 22573833 ~ 22574989 (-)
LOC118946878 NA other downstream 1094004 21744425 ~ 21755710 (-)
G235092 LOC100194668 other downstream 1106094 21738845 ~ 21743411 (-)
G234621 NA other downstream 1350673 21498408 ~ 21498832 (-)
G234600 NA other downstream 1379560 21469661 ~ 21469945 (-)
G237047 NA other upstream 290706 23157109 ~ 23189031 (-)
LOC110514600 ensa other upstream 905121 23771511 ~ 23780158 (-)
G237657 LOC106605316 other upstream 1314153 24180556 ~ 24183964 (-)
G237832 NA other upstream 1654816 24521219 ~ 24521544 (-)
LOC110515154 LOC106605289 other upstream 1903159 24767049 ~ 24799511 (-)

Expression


Co-expression Network