LOC110514295 (LOC106605350)


Basic Information

Item Value
gene id LOC110514295
gene name LOC106605350
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 22867615 ~ 22869747 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021593758.2
tGGCGCCTTTCACGATCCGTAGATTTTTTGCTATGACGCAATAATTGTGCGTCGTCGCCTGTTGGACGTCATTACAACGATCCGTATCCATTTGTTGTGCTCCCTGAATCAAGAATGGATAGGAAATTTGAAGTTGATAACCTCGAAACGCGTCTTGAGACGCTGGAAAGTCGTATATACGGTGAAAAAAGGAACAAGGGAGGGAAACCCGTGAAGTGCGCGGATTCCCTCTCCAGAATTCAGGCCGCCCTTACAAACACTGCAAATAAGAGGGAACGAGTGAAGATTCTACACAAAAAGATTGAGGACCTGCTGAAGTATCTGAACCCTCAGTTCACTGACCACATCACTGTTCCTGATGCCATGAAGCTGGAATTCATCCTTGCTGAGGAAGACTTCCTCCTTTCCCAGGCCACGCTTCTGGAGCAGGTCAGCAACCTCCAGCCACTATTGGACAGCAACTACATCAGAGATGTGCCAGAGCATGCCACCAAGCTACAGCGTTTGTCTCAGATTCACATCAAAGAGCAgGACCAAACTGAGGCCCAGTCCCTAGAGGTGAAGAAGCTGTTTGAGGAGTATAACAAAATGATGTTCCTGCTGTCCAAGCAGTTCACCCAGTGGGATGAGAGCCTGCGGAAAGTGGAGGAGGCAAAGGGAATCCGTCAAGTGGAGTAGCGATTATGTCCAGTGATGACCGTTATGACGTCACAGCATGATGTCAAGTGTCCGAAATGCACATTAATGTAACTTGCTGgatattattgttatttatttacagCTACATCTAGAGACATTTGCATAGCATATATATATCCTCTTTGTACATTTATTCAACATAGAATGTACCCATGCATTCCAACTCTGAAACACTGCTCCAGGCAGTCCTGCTTTCTTTCTAGGTCGCTTGACAGTAGAACATAGAGAATAATTTGCACACTAACTTAATTCTTCTTCCAGAAAGTAAATGGTTTTATATCAGACATGACTGCAAATGTAAAGTAATTGCAATAAAATCCATACTGTTCAACCTGAA

Function

NR:

description
PREDICTED: dynactin subunit 3-like

GO: NA

KEGG:

id description
K10425 DCTN3; dynactin 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021593758.2 True 1036 mRNA 0.44 7 22867615 22869747

Neighbor

gene id symbol gene type direction distance location
LOC110503928 LOC106581194 coding downstream 1212 22849505 ~ 22866403 (-)
trnap-agg-7 NA coding downstream 18320 22849224 ~ 22849295 (-)
bbs9 bbs9 coding downstream 18860 22643841 ~ 22848755 (-)
bmper LOC106581223 coding downstream 225854 22618094 ~ 22641761 (-)
LOC110514157 LOC106581233 coding downstream 255644 22608604 ~ 22611971 (-)
LOC110514303 prdm1 coding upstream 33982 22903729 ~ 22919447 (-)
LOC110514322 LOC106581161 coding upstream 168013 23037760 ~ 23051032 (-)
LOC110514382 NA coding upstream 268889 23138636 ~ 23140888 (-)
LOC118944658 LOC100136303 coding upstream 271087 23140834 ~ 23142966 (-)
LOC110514348 LOC106581121 coding upstream 274769 23144516 ~ 23164384 (-)
G236049 NA non-coding downstream 18462 22848844 ~ 22849153 (-)
G236003 NA non-coding downstream 96952 22769166 ~ 22770663 (-)
G235959 NA non-coding downstream 169004 22672275 ~ 22698611 (-)
G236082 NA non-coding upstream 27573 22897320 ~ 22897536 (-)
G236084 NA non-coding upstream 29970 22899717 ~ 22899933 (-)
G236085 NA non-coding upstream 30780 22900527 ~ 22900770 (-)
G236095 NA non-coding upstream 51091 22920838 ~ 22921076 (-)
G235881 NA other downstream 292626 22573833 ~ 22574989 (-)
LOC118946878 NA other downstream 1112114 21744425 ~ 21755710 (-)
G235092 LOC100194668 other downstream 1124204 21738845 ~ 21743411 (-)
G234621 NA other downstream 1368783 21498408 ~ 21498832 (-)
G234600 NA other downstream 1397670 21469661 ~ 21469945 (-)
G237047 NA other upstream 287362 23157109 ~ 23189031 (-)
LOC110514600 ensa other upstream 901777 23771511 ~ 23780158 (-)
G237657 LOC106605316 other upstream 1310809 24180556 ~ 24183964 (-)
G237832 NA other upstream 1651472 24521219 ~ 24521544 (-)
LOC110515154 LOC106605289 other upstream 1899815 24767049 ~ 24799511 (-)

Expression


Co-expression Network