LOC110514335 (LOC106581155)


Basic Information

Item Value
gene id LOC110514335
gene name LOC106581155
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 23119383 ~ 23133074 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021593782.2
CATATCTGTGTTACCATGGCTACTAACGCATGCAGTCTGTATTAACTCCAGTTGGGGGCGAACATTTCAAAGATTTGTGCAGTGAACACATCATCACTCAGGTAGCTAGCAAAAGGTGTAGACCCTGAGCGGTGGATAGAAGGTACCCTTCTCAGTTACTTCTACAAAACGTATTTCACAGCCGAATATTTACGATTATGAAAACATGGTCGTAAAAACTAGAAAACAAAACGTGAAGGATCAACCGCCGCAGCCCAACGTCGACGACAGAGACAGGAGTCCGTTTGTATCGCCAGGCACCGGGAAAAGTAGACGAGCAGGCAAAGGCACCCCTTTCAACAGCTTGCTTCACAATAGGAATGGACTATTTCCTGGGTTTTCATTCATCAGAAGTAAGCTTGGCCTTACACCGTCTGCTTTTGTGAAACTCGGAATCACTCTGGTTCTTGCTGCTCTGGCTGGGTATTTACATTGGTACCATCTCTCACGCCTCTTTGAAAATGACAGACACTTCTCACATCTGTCAGGACTAGAAAAAGAAATGGCATTTCGGACAGAAATGGGTTTATACTACTCCTACTTCAAGACCATCATTGAGGCCCCAACCTTTATCAACGGCCTGTATCTGGTCATGAACGATCGGCTTACAGAGTACCCACTGGTTATAAACACACTGAAGAGGTTCAATCTCTATCCAGAGGTGGTCCTGGCCAGCTGGTACAGAATCTACACAGATATAATGGAATTCTTTGGACTCCCCACCAAGATGTGTTGGTCTAtcaatagaggagagggtatggcTCCGGTGGATGGCTGTGAAGgtatGGGTGACCCCGCATACTTCTACGTGACCTTTGTGTTCCTCCTCAATGGTCTGATGATGAGTCTGTTCTTCATCTACGGGACCTACCTCAGtGGCAGTCGGCTCGGGGGTATGGTCACGGTGCTGTGTTTCTTCTTTAACCATGGAGAGaGCACCCGGGTCATGTGGACTCCGCCCCTGAGGGAGAGCTTCTCCTATCCCTTCCTGGTCCTGCAGATGTTACTCCTCACCCACATCCTCCGGACACACAACCCCAGCAGAAAGACCATGTGGGCGCTGGGCATTTCCAATTTGTGCTTCATGCTGCCCTGGCAGTTTGCCCAGTTTGTGCTGCTTACCCAGGTGGCCTCTCTCTTTGCCTCGTACATCCTGGGATACATCAGCCCCACCAAAATTCAGTCCCTCCTAGTGACACACATGATCACACTTGCCGTGTGCTTTGTTCTGATGTTTGGAAACTCCATGCTGCTGACATCATTCTATGCATCCTCGCTGGTCTCCATTTGGGGAATAATTGCCCTGCGGGACAAATTTGCAGAAGCCTTCAAACCTGGCCTCATCACATGGGTCATGCAGGGCCTGGTATGGGTTGTCTCCACTGTCATTCTCAAGTTCATGCTGTCAGCCATCTTTGGAGCCTCTGATGATGCTCACATCAGTAGCTTAATAAAGTCCAAGTTTACCAGCTACAAGGACTTTGACACCATGATGTATACCTGTGCTGCGGAGTTTGACTTCATGGAAATTGAGACCCCACTGCGCTACATCAAGACACTGCTGCTCCCCATCAACATGCTGGTGGTTGCTGTCGTAGCAGGACGGACCATCCAGGATGTTGTGAGGTtcctgagggaaggagagaagtatTCTGTCAAACCTGAAGACGATGACGATGATGAAGAGCCAGAAATGTTGGCAAAAGGAGAGCTGGTGTACCATAGCCTACAGTTGATAGCGTTTGCAGTGCTGGCGATGCTCATCATGCGTCTCAAGCTCTTCCTCACGCCCCACATGTGCATCATGGCCTCCTTGATCTGCTCCAAACAGttgTTTGGCTGGATAGGGGAGAAGTTCAAGCTCCACATGATGGTGTTTGGCATCCTGTCCATCATGGCCATGCAGGGCGCGGCCAACCTGCAGGCCCAGTGGGGCATCATGGGAGAATTCAGCAACCTGCCCCAGGAGCAGCTGCTGGACTGGATCAAAGACAACACCCGGCCCAACGCTGTGTTTGCTGGAGCCATGCCCACCATGGCCAGTGTGAAGCTGTCAGCCGGCCGGCCCATCGTCAATCACCCACACTACGAGGATGCTGGACTGAGGGAGAGGACCAAGCTGGTGTACGCCATGTACAGCCGCAAGTCTGCCGAGGTGGTGAAGAGGAACCTGATGCAGATGGAGGTGGACTACTTTGTCCTGGAGGACTCGTGGTGCACCCGGCGCTCCAGGCCTGGCTGCAGTATGCCTGAGATCTGGGATGTGGAGGACCCTCAGAACGCTGGGAAAGTCCCCCTCTGTACACTCATGTCCAGGGACTCCAGGCCCCACTTTGCCACTGTCTTTCACAACAACGTTTACAAAGTTCTAAGAGTTCCCAAAGCAGCTAAAGAGCTCAGATAACAGCAGAGTCGGCCTGTTTTTGGTGCTACCGTCTAGTATTTCCACCGACCTGGTGCGTGTTTTTATATAGTTCCTTTTCCTGTTGGTCTGTCTCCCTTTGGAGTTACCACTGCCACAGCTGCGTTTTACGTCTCCCTGTTTTGAGGCTCTGTTAGAGCAGTGGACTGACGTGATGGGCTAGATAAGAGTCCCCACTCGTGTTGTATAAGCATTTTATTTTATGCGAGCTTATACTAAAGTTGTTCTTAATGACTGAATTAGTTTTATTTTAGTGTGTATTAGTACATTTTGGATGTCAGGCATATTTAGTTTTTGTACTTTTGTGCCCTTTTTTTGCGTATTATGAATTGTCATTTATTTAGACGGTGTTATTTTTTGATTCACTGGTGTGTGTAATACTTTTGTTATTTGCCAAAGCAAAGTGTAGTTAGTATAACTACTAGTGTTACAGCTGCAAGTGTCAGGTTAATGTAGCACACCTGAAAAGTCATTTTTTAAGAGAAGCAGAATATGATAATCTGCAAAAATATTTTTCCCAACAACCCATTGCAACTTGTAGCAGTGCATTATTTTAAGCATTAGCGTAATGACCTACCACCAAATATCAGTGGTTTAGGACCCTGTATTGACACACAGAAAACACTTAGGCATCTTTTGGAGTTGTTAGTCATGCCAATTTAGCGTCATTGCTTTGTACTCCACCACAGGAAGTTACGTCATGAATTTGTAGCATTTTTTGCACCTCAAAAAGTGGCCTTTGCACATGTCATGAGAGCAACATATTAGAATTCAATGTATTATCACCCAACATTTTCAATTTTTTTGCTTGCGGTTACTTCCCCATTTAATTTTAAGGACATAGCTGTGAAAGACTACACCACTCTGTGGACTCCACTTTACACTCGATAGCACTGGTGTGCTCTACCCACTTAACCACTGTCCCCTTTTGTTCATGCAGCTGTGAAAGTCCCTTTGTCACTCTGAGGTCAAGGGTCAAACAGGAGAGTACTCCACTTAACCGGAGTGTCCTTCTCATTATCCCCGTCACTCACTCTGCCTTTTACCAGTGTGGCATTGAAGTTACTTAAAACAACCCCAGTGTAATCATTCCAGTGTAAAAGCTACAGTATTGTTGGGTACAAATCATCTCACCAATACAGGTGAGGCTTTTTAGCAATAAGCATAGTTAGTTACTCATAAAGACTGTTTAAGGTTTATACATTTTATACAACATTCATCAATTGTAATAGTATCAAGCGGCGGTTTCAATTAAATGCAAGGTGGAAGCTAGAAGTTTATTTCAATGTATTCTACTATTTCTGTAACCGTTCATGAATAGCACAGCAGGTGCTTATGGTGTTTTATGCTAAGTTTATTTTTGGTTATGTCCCAGATATACAGTAAGGTACTGAAGTGATCTTGAAAGCAAAGTGCCCATTTTTAGTGGTGGGGCGGTGACCACCCAACCTGAAATATCTCAAATTTGAGTGACAGACCTTGCTTTGTCTAATGCTTGTCTATTTAATCTGtattttgaaaataaaatgttcaTCAGCGTCTTTTATTTTTAACAGTGAAACTAATGAGTTAAAGTTTGTGCTGGTTGATCATTTGAGAGAATTGGATATTTCATTTATTAAATGGTTTCTGGATTCACAGTAATAAGCCTTTATTACTAGAATACACAATTGAATACAAATGTGACTGTTAGAGGTGGCCGTCGCACTATGAAACCAAAGAAAAACATTTGAGGTTCCACTGGGTATGACAAGAAATAGTGAGTGACTTTCAGAAATATCTCGACATAAGTGTTCAAACCCTTgagtcaatattttgtagaagcacctttggcagcgattacaacagTCAGTCTTTCTCGGTAAGTCTTTAAGACCGAGATCATCAATTATATTCACCTGCGGGATGATTTTTACTTGAGCGGATGTTCAgggacataattacaaatcatttgtgaactgtaaattgactgcaagaagtacaaacatatattt
>XM_036972419.1
CATATCTGTGTTACCATGGCTACTAACGCATGCAGTCTGTATTAACTCCAGTTGGGGGCGAACATTTCAAAGATTTGTGCAGTGAACACATCATCACTCAGGTAGCTAGCAAAAGGTGTAGACCCTGAGCGGTGGATAGAAGGTACCCTTCTCAGTTACTTCTACAAAACGTATTTCACAGCCGAATATTTACGATTATGAAAACATGGTCGTAAAAACTAGAAAACAAAACGTGAAGGATCAACCGCCGCAGCCCAACGTCGACGACAGAGACAGGAGTCCGTTTGTATCGCCAGGCACCGGGAAAAGTAGACGAGCAGGCAAAGGCACCCCTTTCAACAGCTTGCTTCACAATAGGAATGGACTATTTCCTGGGTTTTCATTCATCAGAAGTAAGCTTGGCCTTACACCGTCTGCTTTTGTGAAACTCGGAATCACTCTGGTTCTTGGTACCATCTCTCACGCCTCTTTGAAAATGACAGACACTTCTCACATCTGTCAGGACTAGAAAAAGAAATGGCATTTCGGACAGAAATGGGTTTATACTACTCCTACTTCAAGACCATCATTGAGGCCCCAACCTTTATCAACGGCCTGTATCTGGTCATGAACGATCGGCTTACAGAGTACCCACTGGTTATAAACACACTGAAGAGGTTCAATCTCTATCCAGAGGTGGTCCTGGCCAGCTGGTACAGAATCTACACAGATATAATGGAATTCTTTGGACTCCCCACCAAGATGTGTTGGTCTAtcaatagaggagagggtatggcTCCGGTGGATGGCTGTGAAGgtatGGGTGACCCCGCATACTTCTACGTGACCTTTGTGTTCCTCCTCAATGGTCTGATGATGAGTCTGTTCTTCATCTACGGGACCTACCTCAGtGGCAGTCGGCTCGGGGGTATGGTCACGGTGCTGTGTTTCTTCTTTAACCATGGAGAGaGCACCCGGGTCATGTGGACTCCGCCCCTGAGGGAGAGCTTCTCCTATCCCTTCCTGGTCCTGCAGATGTTACTCCTCACCCACATCCTCCGGACACACAACCCCAGCAGAAAGACCATGTGGGCGCTGGGCATTTCCAATTTGTGCTTCATGCTGCCCTGGCAGTTTGCCCAGTTTGTGCTGCTTACCCAGGTGGCCTCTCTCTTTGCCTCGTACATCCTGGGATACATCAGCCCCACCAAAATTCAGTCCCTCCTAGTGACACACATGATCACACTTGCCGTGTGCTTTGTTCTGATGTTTGGAAACTCCATGCTGCTGACATCATTCTATGCATCCTCGCTGGTCTCCATTTGGGGAATAATTGCCCTGCGGGACAAATTTGCAGAAGCCTTCAAACCTGGCCTCATCACATGGGTCATGCAGGGCCTGGTATGGGTTGTCTCCACTGTCATTCTCAAGTTCATGCTGTCAGCCATCTTTGGAGCCTCTGATGATGCTCACATCAGTAGCTTAATAAAGTCCAAGTTTACCAGCTACAAGGACTTTGACACCATGATGTATACCTGTGCTGCGGAGTTTGACTTCATGGAAATTGAGACCCCACTGCGCTACATCAAGACACTGCTGCTCCCCATCAACATGCTGGTGGTTGCTGTCGTAGCAGGACGGACCATCCAGGATGTTGTGAGGTtcctgagggaaggagagaagtatTCTGTCAAACCTGAAGACGATGACGATGATGAAGAGCCAGAAATGTTGGCAAAAGGAGAGCTGGTGTACCATAGCCTACAGTTGATAGCGTTTGCAGTGCTGGCGATGCTCATCATGCGTCTCAAGCTCTTCCTCACGCCCCACATGTGCATCATGGCCTCCTTGATCTGCTCCAAACAGttgTTTGGCTGGATAGGGGAGAAGTTCAAGCTCCACATGATGGTGTTTGGCATCCTGTCCATCATGGCCATGCAGGGCGCGGCCAACCTGCAGGCCCAGTGGGGCATCATGGGAGAATTCAGCAACCTGCCCCAGGAGCAGCTGCTGGACTGGATCAAAGACAACACCCGGCCCAACGCTGTGTTTGCTGGAGCCATGCCCACCATGGCCAGTGTGAAGCTGTCAGCCGGCCGGCCCATCGTCAATCACCCACACTACGAGGATGCTGGACTGAGGGAGAGGACCAAGCTGGTGTACGCCATGTACAGCCGCAAGTCTGCCGAGGTGGTGAAGAGGAACCTGATGCAGATGGAGGTGGACTACTTTGTCCTGGAGGACTCGTGGTGCACCCGGCGCTCCAGGCCTGGCTGCAGTATGCCTGAGATCTGGGATGTGGAGGACCCTCAGAACGCTGGGAAAGTCCCCCTCTGTACACTCATGTCCAGGGACTCCAGGCCCCACTTTGCCACTGTCTTTCACAACAACGTTTACAAAGTTCTAAGAGTTCCCAAAGCAGCTAAAGAGCTCAGATAACAGCAGAGTCGGCCTGTTTTTGGTGCTACCGTCTAGTATTTCCACCGACCTGGTGCGTGTTTTTATATAGTTCCTTTTCCTGTTGGTCTGTCTCCCTTTGGAGTTACCACTGCCACAGCTGCGTTTTACGTCTCCCTGTTTTGAGGCTCTGTTAGAGCAGTGGACTGACGTGATGGGCTAGATAAGAGTCCCCACTCGTGTTGTATAAGCATTTTATTTTATGCGAGCTTATACTAAAGTTGTTCTTAATGACTGAATTAGTTTTATTTTAGTGTGTATTAGTACATTTTGGATGTCAGGCATATTTAGTTTTTGTACTTTTGTGCCCTTTTTTTGCGTATTATGAATTGTCATTTATTTAGACGGTGTTATTTTTTGATTCACTGGTGTGTGTAATACTTTTGTTATTTGCCAAAGCAAAGTGTAGTTAGTATAACTACTAGTGTTACAGCTGCAAGTGTCAGGTTAATGTAGCACACCTGAAAAGTCATTTTTTAAGAGAAGCAGAATATGATAATCTGCAAAAATATTTTTCCCAACAACCCATTGCAACTTGTAGCAGTGCATTATTTTAAGCATTAGCGTAATGACCTACCACCAAATATCAGTGGTTTAGGACCCTGTATTGACACACAGAAAACACTTAGGCATCTTTTGGAGTTGTTAGTCATGCCAATTTAGCGTCATTGCTTTGTACTCCACCACAGGAAGTTACGTCATGAATTTGTAGCATTTTTTGCACCTCAAAAAGTGGCCTTTGCACATGTCATGAGAGCAACATATTAGAATTCAATGTATTATCACCCAACATTTTCAATTTTTTTGCTTGCGGTTACTTCCCCATTTAATTTTAAGGACATAGCTGTGAAAGACTACACCACTCTGTGGACTCCACTTTACACTCGATAGCACTGGTGTGCTCTACCCACTTAACCACTGTCCCCTTTTGTTCATGCAGCTGTGAAAGTCCCTTTGTCACTCTGAGGTCAAGGGTCAAACAGGAGAGTACTCCACTTAACCGGAGTGTCCTTCTCATTATCCCCGTCACTCACTCTGCCTTTTACCAGTGTGGCATTGAAGTTACTTAAAACAACCCCAGTGTAATCATTCCAGTGTAAAAGCTACAGTATTGTTGGGTACAAATCATCTCACCAATACAGGTGAGGCTTTTTAGCAATAAGCATAGTTAGTTACTCATAAAGACTGTTTAAGGTTTATACATTTTATACAACATTCATCAATTGTAATAGTATCAAGCGGCGGTTTCAATTAAATGCAAGGTGGAAGCTAGAAGTTTATTTCAATGTATTCTACTATTTCTGTAACCGTTCATGAATAGCACAGCAGGTGCTTATGGTGTTTTATGCTAAGTTTATTTTTGGTTATGTCCCAGATATACAGTAAGGTACTGAAGTGATCTTGAAAGCAAAGTGCCCATTTTTAGTGGTGGGGCGGTGACCACCCAACCTGAAATATCTCAAATTTGAGTGACAGACCTTGCTTTGTCTAATGCTTGTCTATTTAATCTGtattttgaaaataaaatgttcaTCAGCGTCTTTTATTTTTAACAGTGAAACTAATGAGTTAAAGTTTGTGCTGGTTGATCATTTGAGAGAATTGGATATTTCATTTATTAAATGGTTTCTGGATTCACAGTAATAAGCCTTTATTACTAGAATACACAATTGAATACAAATGTGACTGTTAGAGGTGGCCGTCGCACTATGAAACCAAAGAAAAACATTTGAGGTTCCACTGGGTATGACAAGAAATAGTGAGTGACTTTCAGAAATATCTCGACATAAGTGTTCAAACCCTTgagtcaatattttgtagaagcacctttggcagcgattacaacagTCAGTCTTTCTCGGTAAGTCTTTAAGACCGAGATCATCAATTATATTCACCTGCGGGATGATTTTTACTTGAGCGGATGTTCAgggacataattacaaatcatttgtgaactgtaaattgactgcaagaagtacaaacatatattt

Function

NR:

description
probable C-mannosyltransferase DPY19L1

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K24553 DPY19L; C-mannosyltransferase DPY19L

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021593782.2 False 4455 mRNA 0.45 22 23119383 23133074
XM_036972419.1 True 4430 mRNA 0.45 21 23119383 23133074

Neighbor

gene id symbol gene type direction distance location
LOC110514282 LOC106581183 coding upstream 225607 22869740 ~ 22893776 (+)
LOC110514168 LOC106581241 coding upstream 501300 22612036 ~ 22618089 (+)
LOC110514114 can7 coding upstream 544273 22557122 ~ 22575110 (+)
LOC110514095 LOC106581260 coding upstream 575284 22513124 ~ 22544099 (+)
LOC118947118 NA coding upstream 632867 22482472 ~ 22488203 (+)
smarcc1a LOC106605342 coding downstream 77344 23210418 ~ 23227568 (+)
LOC110514420 LOC106581064 coding downstream 103188 23236262 ~ 23290996 (+)
elp6 LOC106581052 coding downstream 169698 23302772 ~ 23306081 (+)
LOC110514448 LOC106581016 coding downstream 173158 23306232 ~ 23342019 (+)
LOC110514472 LOC106581037 coding downstream 235930 23369004 ~ 23374440 (+)
G236249 NA non-coding upstream 53949 23065157 ~ 23065434 (+)
G236235 LOC106581161 non-coding upstream 77076 23040257 ~ 23042307 (+)
G236234 LOC106581161 non-coding upstream 79324 23036054 ~ 23040059 (+)
G236181 NA non-coding upstream 115435 23003569 ~ 23003948 (+)
G236168 NA non-coding upstream 125135 22994023 ~ 22994248 (+)
G236271 LOC106581124 non-coding downstream 11442 23144516 ~ 23191853 (+)
G236296 NA non-coding downstream 59762 23192836 ~ 23193447 (+)
G236298 NA non-coding downstream 60882 23193956 ~ 23194256 (+)
G236300 NA non-coding downstream 65058 23198132 ~ 23198366 (+)
G236302 NA non-coding downstream 66810 23199884 ~ 23200135 (+)
G235571 NA other upstream 420549 22672736 ~ 22698834 (+)
G235569 NA other upstream 438655 22673525 ~ 22685509 (+)
LOC110514034 NA other upstream 646466 22460524 ~ 22472917 (+)
G235426 LOC106581355 other upstream 814477 22303641 ~ 22304906 (+)
LOC110503910 LOC106580557 other upstream 1051303 22057484 ~ 22068080 (+)
G236301 NA other downstream 65778 23198852 ~ 23199075 (+)
G236370 LOC106581434 other downstream 213806 23346880 ~ 23349378 (+)
G236372 LOC106581434 other downstream 217017 23350091 ~ 23350815 (+)
LOC110514613 hormad1 other downstream 659723 23780400 ~ 23795199 (+)

Expression


Co-expression Network