LOC118944658 (LOC100136303)


Basic Information

Item Value
gene id LOC118944658
gene name LOC100136303
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 23140834 ~ 23142966 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118944658
ATGACTAAATGTGACATGCCTGTGTCAGGGCTCTCTAtcctcattcttcttcttctggcCCACAGTGAATTTTGCTCTGAGCTATCCTCATTATTCTCCTTCTGGCCCACAGTGTATGTTGCTCTGGGGGGCAAAGCAGCCCAATCCTCCACATTCTATGGAGGCACTGCAAAAAGATCCCTTGATGGAATATGGAACTCGACTTACGAAGATCACTCCTGCAGCCACACTTTGGGAGAGACCAACCCCTGGTGGAGGGTGGACCTGCCGGAGACTTACCAAGTCCCCTCCGTCACCATCACCAACAGAGATACTTCAGCAGAGAGGATCAACGGGGCTGAGATCCGCATTGGAAACTCCCTGGAGAACGATGGTAACAGTAACCCCAGGTGTGTCACTGCCCTTTCATCCTACATTTTAGCTTAGTAAAAATgcctttgacaacttttactccactagaTTCCTATTTTATGTTTACTTTTCACTCCCATATATTttcactgacacccaaaagtactcaggcaggacagcaaaatggtccaattcatgcacttgtAAAGATAATATTACTGGGTAACTTACTCTTTTACTTCTATCTTTTTGTACTGccgtatatttacttttactcaagtatgacagttgggtacttttttcacAACTGGGCTTCAAAAGGAGGTGACGATAGAGAATACGAGGAATCCACCTCCTCCTAATACATCTTAATGTTTCATCCAGTTGTGCGTTGAGATCCTACATCCCAGCAGGGGGCTCCACTACATTTCAATGTCACGGGATGTTGATCCAGAGATGATCGATGGGGCTGAAATCCACTTTGAAAACTGCAGAATAACGGCAACAACAATCCATTGTGA

Function

NR:

description
FBPL4 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118944658 True 872 mRNA 0.45 2 23140834 23142966

Neighbor

gene id symbol gene type direction distance location
LOC110514322 LOC106581161 coding downstream 89802 23037760 ~ 23051032 (-)
LOC110514303 prdm1 coding downstream 221387 22903729 ~ 22919447 (-)
LOC110514295 LOC106605350 coding downstream 271087 22867615 ~ 22869747 (-)
LOC110503928 LOC106581194 coding downstream 274431 22849505 ~ 22866403 (-)
trnap-agg-7 NA coding downstream 291539 22849224 ~ 22849295 (-)
LOC110514348 LOC106581121 coding upstream 1550 23144516 ~ 23164384 (-)
LOC110514368 LOC106581124 coding upstream 29644 23172610 ~ 23196343 (-)
LOC110503934 LOC106581009 coding upstream 199157 23342123 ~ 23368891 (-)
LOC110514498 LOC106580978 coding upstream 263287 23406253 ~ 23563491 (-)
LOC110514548 LOC106580919 coding upstream 567038 23710004 ~ 23713322 (-)
G237041 NA non-coding downstream 17758 23122483 ~ 23123076 (-)
G237009 NA non-coding downstream 75874 23064754 ~ 23064960 (-)
G236994 NA non-coding downstream 104131 23036088 ~ 23036703 (-)
G236196 NA non-coding downstream 127002 23013580 ~ 23013832 (-)
G236192 NA non-coding downstream 129477 23011124 ~ 23011357 (-)
G237033 NA non-coding upstream 548 23143514 ~ 23143904 (-)
G237028 NA non-coding upstream 994 23143960 ~ 23144390 (-)
G237068 NA non-coding upstream 47645 23190611 ~ 23191037 (-)
G237069 NA non-coding upstream 51057 23194023 ~ 23194443 (-)
G237080 NA non-coding upstream 64784 23207750 ~ 23207980 (-)
G235881 NA other downstream 565845 22573833 ~ 22574989 (-)
LOC118946878 NA other downstream 1385333 21744425 ~ 21755710 (-)
G235092 LOC100194668 other downstream 1397423 21738845 ~ 21743411 (-)
G234621 NA other downstream 1642002 21498408 ~ 21498832 (-)
G234600 NA other downstream 1670889 21469661 ~ 21469945 (-)
G237047 NA other upstream 14143 23157109 ~ 23189031 (-)
LOC110514600 ensa other upstream 628558 23771511 ~ 23780158 (-)
G237657 LOC106605316 other upstream 1037590 24180556 ~ 24183964 (-)
G237832 NA other upstream 1378253 24521219 ~ 24521544 (-)
LOC110515154 LOC106605289 other upstream 1626596 24767049 ~ 24799511 (-)

Expression


Co-expression Network