LOC110514588 (LOC106580904)


Basic Information

Item Value
gene id LOC110514588
gene name LOC106580904
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 23768099 ~ 23770876 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021593909.2
ATGAGTCTGTCGAAGTCGATTACACGAGCCACAACTACGATGTTGAATTTTCAAAATGGAGTCGTTGGAGGCTCTTCGTACCCTGCTGGTACCTCTTTGTACTATTTCGGCGAGACTGGGGCTGTACGTGCTGGGGCGTCACCGAAGTCAAAAGTGGATACTGACTTGGGTAATGGGACTGGCGACACTCCACCACGACCCACGAAGTTAGGAGTGAATGTCGTGAAAAGCAACGTCCTGGGTAATCATTTGTCAGACCGAAGCAACAATGACGACTCTGACGGTTCTTTGCCCTGCACTCCTCAGGTGGCGTCAGAATGTGGGCCTGAACTATCGAATTGTCAATCGGGCGATGAAGTATTGGAACATGATACAAGACAACTAATTGAAAACGTATTGGTGGACTATACAGGACTGTCTCCGTCTCGTTGTAAGCAAAGCAAGGCTCTTACGACGATGAAGAAAGTGGTGAAGGATATAATAGCAAAGCACCGATACGCATACAATGgtaTGATCGCCAAACTTGACTTAGATGACCGATGCGATGACATGAGTTTCATCAATTCTGTGGCCACGACCATGTTCAGTGATGGGACCACGAACTGGGGTCGCATCGCCAGCCTGGTGGCATTTGGAGCAGTGGTGAGCCAGCACTTGAAGGAGATGGGCAGGGGACACTGCATTGAGTCGGTGGGCCAAAAGATCGCCACATACCTCCTCTCTGACCAAAGGGACTGGCTGGTCAAAAACAATGCTTGGAATGGATTTGTAGAGTTCTTTCATGTGCAAGATCCAGAGTCCTCAGTAAGGAACACCCTCATAGCCTTTGCTGGATTTGCTGGGCTTGGGGCAACACTCGCCATGTTGGTCAGGTGAATTGAACTATAAAAGACATCTTACTTTTTTCAACAAAGAAAATGGACTATTCCCGCAAGTTCTCTGAAATCCTTAATATCACCATGATTGGAATGACTACCCAATGATGTCCTGTTTAGTCAAAGAAGAGGGTCAGTCTGTTGGATTATAGTGGCGGACTGAATTGGGACAGTGCTTTGGTGTCAAGCTCAAGTTAGCTTTTTTCCGCATCATGTTTTGgtgctgtttttgttgttgtttgagtgGCTATTTGAGGATATTTGGTAGTTGTTGGAACAGTCTCCAAATATATTCATCTGACTACTTAAATCTAACGGACTTGTTAAATGGAGCTTTTATTTAATGTAAAAAGTACagacattttatttttgtaataaatGAATAGAAACAGTTAATTAATCTGCAAATTTTCAACTCACTCTTTAAGTAATCAAGATGGAAAAGCCTTAGCTAATAGCTATACTTGGCAATGGCAAAGTTTCGCCTCTGACCATAAAGTTGGCTCAAATGACTTGTGATATTAGTCATACATGTACAAATGGGGATTGGTGTAAGAAAGACAGAATCTGCATTGAACTGACCAGTAAGGGCCTTAGAATTCAACTAAGGTATACCCAGTTTATGGGCATTGAAAATGTAAAGTTCTTACAGCAGGGAAGACTATTCTACATGCAATTAATTGCCTTACATGCATGTCATCTCGCCTACACCCAATTCGTAAGATCATATTGCTGTTCCTTGGGGTAGATTTGCCAGTGATGCCTGGCATTGCATTTGCGTGGCTGTAATGTGACTTCCTGGTTAAGGAAATCTTGTGGCTGTTGCActgggagggggaagggggaaacCTGTTTTAAAGTCAGTTCAAAATTCCACTCAAGACTATGCTGATTTTGTATTTGAAGCGTTTCATTTCCAAGTTATATCCATGTAAATGCAATGTGCTCACAGGTTTAAGTTTTGAATATGAGCTTAAAGATTGCAAATGGTATCTGGCATTGGTTCAATAGAGGCAAGATTGTCTGGACTGTAAACGTGTACAGCAGTTCCACCTAACAAACTAGCACTAACCCTGATGCATCTTGCTGGCAAATTCCTTTAATCTCCTGAAGTTATATGATTAAAGGATAAAATCATGCAACTTTTGTGACTGCAATGAATAAAGACTGTGACTTTATTCACTTTGTGGCAGCAATTGTCTGAAAGCAGAAGTTTGGCTGTCAACTTTGAGACTACttctcaggggggggggggggttgtgaaaAGACAGCAGTGACATCTGCACTGTGCTAGTTTCTGGTGATGAAAAGTAACCACATACACAAATGAATTCCTGTGTTGTACATAGTCATCTACACACACGCAGTCAAAAACATGTTTATTCGCACCATACCCCCTGGACATACACTGTGAGGTTATTTCCTAGAAATGAAGCTTCTGTGGTAACCATGCCTATATGTGTGTCATAGGCAGGCCACCACTGTATCGCTGCAGCCTCAGTTGTCAGAAACATAATTATTAAATTAAGACTGCCAGAACCCGTTGGGTGCCAATAAAATAAGTTGACAGTA

Function

NR:

description
induced myeloid leukemia cell differentiation protein Mcl-1-like

GO:

id name namespace
GO:0042981 regulation of apoptotic process biological_process

KEGG:

id description
K02539 MCL1; myeloid leukemia cell differntiation protein MCL-1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021593909.2 True 2447 mRNA 0.43 3 23768099 23770876

Neighbor

gene id symbol gene type direction distance location
LOC110514538 tmod4 coding downstream 38201 23719389 ~ 23729898 (-)
LOC110514548 LOC106580919 coding downstream 54777 23710004 ~ 23713322 (-)
LOC110514498 LOC106580978 coding downstream 204608 23406253 ~ 23563491 (-)
LOC110503934 LOC106581009 coding downstream 399208 23342123 ~ 23368891 (-)
LOC110514368 LOC106581124 coding downstream 571756 23172610 ~ 23196343 (-)
LOC110514600 ensa coding upstream 635 23771511 ~ 23780158 (-)
LOC100136261 cats coding upstream 61526 23832402 ~ 23840512 (-)
LOC110514697 LOC106580864 coding upstream 70465 23841341 ~ 23849924 (-)
LOC110514815 LOC106580773 coding upstream 204998 23975874 ~ 23980300 (-)
LOC118947709 NA coding upstream 297054 24067930 ~ 24078853 (-)
G237396 NA non-coding downstream 18278 23749554 ~ 23749821 (-)
G237366 LOC106580947 non-coding downstream 81369 23685154 ~ 23686730 (-)
G237162 NA non-coding downstream 381696 23379046 ~ 23386403 (-)
G237114 NA non-coding downstream 473776 23294120 ~ 23294323 (-)
G237086 NA non-coding downstream 477117 23289532 ~ 23290982 (-)
G237457 NA non-coding upstream 96396 23867272 ~ 23867534 (-)
G237462 NA non-coding upstream 100794 23871670 ~ 23871871 (-)
G237463 NA non-coding upstream 101385 23872261 ~ 23872770 (-)
G237464 NA non-coding upstream 102440 23873316 ~ 23873537 (-)
G237470 NA non-coding upstream 110771 23881647 ~ 23884871 (-)
G237047 NA other downstream 579068 23157109 ~ 23189031 (-)
G235881 NA other downstream 1193110 22573833 ~ 22574989 (-)
LOC118946878 NA other downstream 2012598 21744425 ~ 21755710 (-)
G235092 LOC100194668 other downstream 2024688 21738845 ~ 21743411 (-)
G234621 NA other downstream 2269267 21498408 ~ 21498832 (-)
G237657 LOC106605316 other upstream 409680 24180556 ~ 24183964 (-)
G237832 NA other upstream 750343 24521219 ~ 24521544 (-)
LOC110515154 LOC106605289 other upstream 998686 24767049 ~ 24799511 (-)
LOC110515208 LOC106581894 other upstream 1165640 24936516 ~ 25052970 (-)

Expression


Co-expression Network