Gene
RNA
| Item | Value |
|---|---|
| gene id | mapip |
| gene name | LOC106580651 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 24331526 ~ 24336143 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ragulator complex protein LAMTOR2 |
| id | name | namespace |
|---|---|---|
| GO:0043087 | regulation of GTPase activity | biological_process |
| GO:0034613 | cellular protein localization | biological_process |
| GO:0071230 | cellular response to amino acid stimulus | biological_process |
| GO:0032008 | positive regulation of TOR signaling | biological_process |
| GO:0016049 | cell growth | biological_process |
| GO:0005765 | lysosomal membrane | cellular_component |
| GO:0071986 | Ragulator complex | cellular_component |
| GO:0005085 | guanyl-nucleotide exchange factor activity | molecular_function |
| id | description |
|---|---|
| K20398 | LAMTOR2; ragulator complex protein LAMTOR2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| NM_001160633.2 | True | 889 | mRNA | 0.43 | 4 | 24331526 | 24336143 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110514960 | raa2a | coding | downstream | 612 | 24320744 ~ 24330914 (-) |
| LOC110514944 | LOC106580659 | coding | downstream | 7710 | 24313555 ~ 24323816 (-) |
| LOC110514890 | LOC106580679 | coding | downstream | 44908 | 24259081 ~ 24286618 (-) |
| gpatch4 | gpatch4 | coding | downstream | 109799 | 24217505 ~ 24221727 (-) |
| LOC110514831 | nes | coding | downstream | 132713 | 24189209 ~ 24198813 (-) |
| LOC110514914 | LOC106605242 | coding | upstream | 581 | 24336724 ~ 24342873 (-) |
| LOC110514995 | LOC106580635 | coding | upstream | 25340 | 24361483 ~ 24378365 (-) |
| LOC110514973 | LOC106580622 | coding | upstream | 37658 | 24373801 ~ 24378081 (-) |
| LOC110515008 | LOC106605295 | coding | upstream | 52898 | 24389041 ~ 24391115 (-) |
| LOC110515020 | LOC106581398 | coding | upstream | 64561 | 24400704 ~ 24498985 (-) |
| G237723 | NA | non-coding | downstream | 22515 | 24305682 ~ 24309011 (-) |
| G237714 | LOC106605309 | non-coding | downstream | 30873 | 24300193 ~ 24300653 (-) |
| G237705 | NA | non-coding | downstream | 45736 | 24285557 ~ 24285790 (-) |
| G237703 | NA | non-coding | downstream | 47097 | 24284199 ~ 24284429 (-) |
| G237701 | LOC106605310 | non-coding | downstream | 75061 | 24255885 ~ 24256465 (-) |
| G237732 | NA | non-coding | upstream | 12963 | 24349106 ~ 24349359 (-) |
| G237828 | NA | non-coding | upstream | 177968 | 24514111 ~ 24514321 (-) |
| G237829 | NA | non-coding | upstream | 179052 | 24515195 ~ 24515433 (-) |
| G237837 | NA | non-coding | upstream | 190641 | 24526784 ~ 24526988 (-) |
| G237838 | NA | non-coding | upstream | 191157 | 24527300 ~ 24527563 (-) |
| G237657 | LOC106605316 | other | downstream | 147562 | 24180556 ~ 24183964 (-) |
| LOC110514600 | ensa | other | downstream | 551391 | 23771511 ~ 23780158 (-) |
| G237047 | NA | other | downstream | 1142495 | 23157109 ~ 23189031 (-) |
| G235881 | NA | other | downstream | 1756537 | 22573833 ~ 22574989 (-) |
| LOC118946878 | NA | other | downstream | 2576025 | 21744425 ~ 21755710 (-) |
| G237832 | NA | other | upstream | 185076 | 24521219 ~ 24521544 (-) |
| LOC110515154 | LOC106605289 | other | upstream | 433419 | 24767049 ~ 24799511 (-) |
| LOC110515208 | LOC106581894 | other | upstream | 600373 | 24936516 ~ 25052970 (-) |
| LOC110515384 | LOC106582009 | other | upstream | 862945 | 25171287 ~ 25236536 (-) |
| LOC110515750 | LOC106582146 | other | upstream | 1487213 | 25822812 ~ 25825108 (-) |
