LOC118944659 (LOC106581364)


Basic Information

Item Value
gene id LOC118944659
gene name LOC106581364
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 24483236 ~ 24484420 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036964700.1
ATGACAGAATGTGTGGAAGAATGGCTCCTGCAGAACAAGGACAATTTAGAAAAGGGGATTGATATCATAGGACAGGCGTCTGCGATCCTGGCAGTCACTGTGGGCCAGTTCCATCCCATCCTGGAGGCTGTATTCCAAGCATCCTATGAGATCTTCAGCAACCCAGAAGGACAGAACGCCAAGTACCTGACTGAGCAGTTCTTCAAAGTCAACCAGAATTTGAGACGCATCCAGGCTGAGGAAGACCAAATCTCCCGGGAGCTGCAGAAGAGCTCCTTGAATAAGCAACACTTTGACTGGGAGGCACAAATTCTCAACCAGTACAAGAAGTTTGAGGAGTTTTTCAATGCCAAACCCaacttaaaaaaagaaaaaatggaCGAATTCCTCTTAACTTATGAGGTCTTGGAAGAAGACTTGAACCTGGATGCCCTCTACAATGCTTTTACTGGGAATGCCTCAGGTGGCTCCATGCTGCAGACAGTGGTTGAAACAGAACAATTTAATAGAATTGTGGTAGAAGATTTCTGTGATATTCTTAAGAAGCTCTTTGTGAAGGGCATCATTGCCTTCATGGGTTACAACAGCCTCAAGAAAAAGGATGTGGGGTATCAGATGCTGAAGAAGTGGCTTAAGCAGATGGAACAAGTTGAGGAGAGCATGAAAAAAGTGATTGATGATATCATTGATAACTTCGCCCCAAGAGCTAAAGAGGACATGGTAAAACAGCTTGAGGAGATACCTGGCTCTGTTGACCTTGGCTTCACCAAATCCATATTGGACACCCTTAAGAATAAATATGACTGGGTGAGCTGGTCTATCAGGGTCTTCAATGACAAGGAGCGCATTTTCTTTTTCAACTGGCTAGCTGGAAAGAAGTACCATGGCAGTGAAGGAGGAGCTAATTTCTTTGAGGTGATGACCAAAAACAACATCAAAGTGGTGATCTCTTTCAGTGTTCAACCTAAGCTTATCAACATGGATCTGATCAAAGAACAGATTGAGGGGGAGAAGCTGAAGAGGAACATGATGGATGTGGCTCAGATCGTCAGCAGAAGACTCCCCAACTGCCAGGTGCATGCTGTCAGCGCCTATAAGAAAGTGGTGGAGAGCAACAACTTCAAAGAGGGTTGTTACTACTATGgaaaacaccaaaaagtgtacATATGCGTTCATCCTAATTAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106581364

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036964700.1 True 1185 mRNA 0.44 1 24483236 24484420

Neighbor

gene id symbol gene type direction distance location
LOC110515008 LOC106605295 coding downstream 92121 24389041 ~ 24391115 (-)
LOC110514995 LOC106580635 coding downstream 104871 24361483 ~ 24378365 (-)
LOC110514973 LOC106580622 coding downstream 105155 24373801 ~ 24378081 (-)
LOC110514914 LOC106605242 coding downstream 140363 24336724 ~ 24342873 (-)
mapip LOC106580651 coding downstream 147093 24331526 ~ 24336143 (-)
LOC110515051 LOC106581796 coding upstream 81293 24565713 ~ 24576410 (-)
LOC110515085 LOC100380645 coding upstream 118201 24602621 ~ 24619117 (-)
LOC110505156 NA coding upstream 161939 24646359 ~ 24647543 (-)
LOC110515097 LOC106605292 coding upstream 173390 24657810 ~ 24712733 (-)
LOC110515141 LOC106581821 coding upstream 243183 24727603 ~ 24765483 (-)
G237732 NA non-coding downstream 133877 24349106 ~ 24349359 (-)
G237723 NA non-coding downstream 174225 24305682 ~ 24309011 (-)
G237714 LOC106605309 non-coding downstream 182583 24300193 ~ 24300653 (-)
G237705 NA non-coding downstream 197446 24285557 ~ 24285790 (-)
G237703 NA non-coding downstream 198807 24284199 ~ 24284429 (-)
G237828 NA non-coding upstream 29691 24514111 ~ 24514321 (-)
G237829 NA non-coding upstream 30775 24515195 ~ 24515433 (-)
G237837 NA non-coding upstream 42364 24526784 ~ 24526988 (-)
G237838 NA non-coding upstream 42880 24527300 ~ 24527563 (-)
G237840 NA non-coding upstream 44054 24528474 ~ 24528781 (-)
G237657 LOC106605316 other downstream 299272 24180556 ~ 24183964 (-)
LOC110514600 ensa other downstream 703101 23771511 ~ 23780158 (-)
G237047 NA other downstream 1294205 23157109 ~ 23189031 (-)
G235881 NA other downstream 1908247 22573833 ~ 22574989 (-)
LOC118946878 NA other downstream 2727735 21744425 ~ 21755710 (-)
G237832 NA other upstream 36799 24521219 ~ 24521544 (-)
LOC110515154 LOC106605289 other upstream 285142 24767049 ~ 24799511 (-)
LOC110515208 LOC106581894 other upstream 452096 24936516 ~ 25052970 (-)
LOC110515384 LOC106582009 other upstream 714668 25171287 ~ 25236536 (-)
LOC110515750 LOC106582146 other upstream 1338936 25822812 ~ 25825108 (-)

Expression


Co-expression Network