LOC110505156


Basic Information

Item Value
gene id LOC110505156
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 24646359 ~ 24647543 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110505156
aaccattttgggttccatgtagaaccctttccacagacgggacagccgaagaacccctttatgttctagatagcacctttttctcCTAAGAGTGTAACTTCTGAACCTGAAGAGGGAACACCAGACCACTTCTTCATTGCAAGCTGACTACAGTCATCGCCTGCCCCAGTCTTCTGAATGTTGCCCAGTGTTCTCAGCTATGCTTGTTCAATCTCCACCACCCACGCCTTCACCATGGCCCTTAGCCCACTTCAGACCCCACATGGCTCCTGATCCCAACCGGCCCATGGAGGGGGCCATACGGACCAAGCTCACCCAGCAGCTGGAGCCAGAACCCCTGGAAGTCCACAACGAGAGCCACACGCACGCCGTGCCCCCTGGATCCGAGTCCCACTTCCCAGTCCTGGCGGTCAGCCCAGATTCGACTGCCTCTCCCAGCTACAGCGCCACCGCCTTCTCAATGAGACCCTAGCCGAGGAGCTGAAGACCTGTATCCACGCGCTGGCCATCCAGGCCAAGACACCCCAGCAGTGGGGCAGCAACCCCAGTATAGCCAAGAGCCCACCCTGCATGGGAGGATCCAAGGGGGACCACAAGGTGGAGGAGGAACTCAAGGCTGGATGGGACTGACCAGCGAAACTCAGCAGTCATCAACCCTGGTTCTGAAGAGTAACAGCCTGTGCAGGCTTTGGTTCCAGCACTAACTCATCTATTaaaatgtgttgtctgttcaaGACCTTGAATAGTTTAATCAggtctggaacaaaagcctgcacgcCCCATATGCCTGTAGTTTAATCAGGTCTGGAACAAAAACTTGCACGCCCATATGCCTGCAGTTGAAGATGGTGTCTATTAACATTGTTGTAAACTAGTGTGATATAATTTAATTACTGCTTGAGAGGTTGTTTCTAAATGAGCAGCATCACTTCGGTCTCTTGGCAGTTTAATTCAAGAAGAGTTGTGTTTTAGATTAATTAGACTCTTGCATTTAGTGGCCATCACTATAATGTCTCAAGATCTTGTAGTTCAGTAGTATGTGGTACATTGAACTATATGATATGAAGTGATGGAGTGTGTCTGTTTTGTCTGAAAATAAAATGTCTTGTATGTGAGGGCAGAAGTACGAGAAGTCAAGACAGAATAAAGAATATGTTTTCTCAGGTGCATTGTGGCAGTTTTGTG

Function

NR:

description
bolA-like protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110505156 True 1185 mRNA 0.49 1 24646359 24647543

Neighbor

gene id symbol gene type direction distance location
LOC110515085 LOC100380645 coding downstream 27242 24602621 ~ 24619117 (-)
LOC110515051 LOC106581796 coding downstream 69949 24565713 ~ 24576410 (-)
LOC110515020 LOC106581398 coding downstream 147374 24400704 ~ 24498985 (-)
LOC118944659 LOC106581364 coding downstream 161939 24483236 ~ 24484420 (-)
LOC110515008 LOC106605295 coding downstream 255244 24389041 ~ 24391115 (-)
LOC110515097 LOC106605292 coding upstream 10267 24657810 ~ 24712733 (-)
LOC110515141 LOC106581821 coding upstream 80060 24727603 ~ 24765483 (-)
LOC110515154 LOC106605289 coding upstream 119506 24767049 ~ 24799511 (-)
LOC100305168 rbm8a coding upstream 160882 24808425 ~ 24815467 (-)
LOC110515174 NA coding upstream 172300 24819843 ~ 24825136 (-)
G237877 NA non-coding downstream 85783 24560332 ~ 24560576 (-)
G237863 NA non-coding downstream 93379 24552693 ~ 24552980 (-)
G237862 NA non-coding downstream 93985 24552115 ~ 24552374 (-)
G237851 NA non-coding downstream 111498 24534558 ~ 24534861 (-)
G237850 NA non-coding downstream 114311 24531715 ~ 24532048 (-)
G238315 LOC106581815 non-coding upstream 70195 24717738 ~ 24718558 (-)
G238316 NA non-coding upstream 72193 24719736 ~ 24719969 (-)
G238414 NA non-coding upstream 281256 24928799 ~ 24931448 (-)
G237832 NA other downstream 124815 24521219 ~ 24521544 (-)
G237657 LOC106605316 other downstream 462395 24180556 ~ 24183964 (-)
LOC110514600 ensa other downstream 866224 23771511 ~ 23780158 (-)
G237047 NA other downstream 1457328 23157109 ~ 23189031 (-)
G235881 NA other downstream 2071370 22573833 ~ 22574989 (-)
LOC110515208 LOC106581894 other upstream 288973 24936516 ~ 25052970 (-)
LOC110515384 LOC106582009 other upstream 551545 25171287 ~ 25236536 (-)
LOC110515750 LOC106582146 other upstream 1175813 25822812 ~ 25825108 (-)
G240409 NA other upstream 1921558 26569101 ~ 26569522 (-)

Expression


Co-expression Network