LOC118944507


Basic Information

Item Value
gene id LOC118944507
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 24843450 ~ 24844713 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039843.1
TAGAACTACTTCATATAAGGTCAGTGTTTCGTGTTTACCctggcatgacgttttgataTCCATGCAAATCTCTTTCGGACCAGGTAAcgtttatcaatatatttgcctgtaatTACCCCACaaattgaaatgctaattagccTCCAATGTGGCTAGCATACAGAACTACACATCTTGACGCAAGCTTTGACATCATCTCTCAATGCAAACTCTTCGACAAGTAGCAAGTATCCTACGAACTAGCTAACCTTAGGGTCTCTCTGTCGATCGGAAGCAAGGATGGTTCTGTGCTATGTACCGGATTGTAACCACTACTCCGATAAGCACATGTGCATTTTACCGTTTTCCAAGCTCTGTGAGCGAGAGGTGTCGCTGGAGCCATGTGATAAGGTCCCTTGCACCTTGCACCATGCACTTGACCTCCACTACTGCTGTGATGCCCACCAGACCATCCACTGAGGCACCCAGGATCCCAGACCCTGTGACCTAAAGACCTGACTCCTGCATATCCATCCCTGTAGCCATTTTGAATTCCTTGATGTCCTCCTCTTCGTTATCTGAGCCCCACtttacagacaacaccccatccAATGACTATGAACACCTTGAAATGCACTAGATGTAAGAAATGTGCCatataaataaagtttgatttgattgatga

Function

NR:

description
PREDICTED: uncharacterized protein LOC106562934

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039843.1 True 664 mRNA 0.45 3 24843450 24844713

Neighbor

gene id symbol gene type direction distance location
LOC110515174 NA coding downstream 18314 24819843 ~ 24825136 (-)
LOC100305168 rbm8a coding downstream 27983 24808425 ~ 24815467 (-)
LOC110515154 LOC106605289 coding downstream 43939 24767049 ~ 24799511 (-)
LOC110515141 LOC106581821 coding downstream 77967 24727603 ~ 24765483 (-)
LOC110515097 LOC106605292 coding downstream 130717 24657810 ~ 24712733 (-)
LOC110515183 LOC106581871 coding upstream 39915 24884628 ~ 24893913 (-)
LOC110515194 LOC106581883 coding upstream 59551 24904264 ~ 24920014 (-)
LOC110515208 LOC106581894 coding upstream 92916 24936516 ~ 25052970 (-)
LOC110515238 LOC106581944 coding upstream 213881 25058594 ~ 25072664 (-)
LOC110515290 LOC106581956 coding upstream 256680 25101393 ~ 25106636 (-)
G238316 NA non-coding downstream 123481 24719736 ~ 24719969 (-)
G238315 LOC106581815 non-coding downstream 124892 24717738 ~ 24718558 (-)
G237877 NA non-coding downstream 282874 24560332 ~ 24560576 (-)
G238414 NA non-coding upstream 84086 24928799 ~ 24931448 (-)
G238494 tap1 non-coding upstream 284389 25129102 ~ 25129653 (-)
G238509 NA non-coding upstream 304837 25149550 ~ 25149823 (-)
LOC110515384 LOC106582009 non-coding upstream 326613 25171287 ~ 25236536 (-)
G238588 NA non-coding upstream 333923 25178636 ~ 25178846 (-)
G237832 NA other downstream 321906 24521219 ~ 24521544 (-)
G237657 LOC106605316 other downstream 659486 24180556 ~ 24183964 (-)
LOC110514600 ensa other downstream 1063315 23771511 ~ 23780158 (-)
G237047 NA other downstream 1654419 23157109 ~ 23189031 (-)
LOC110515750 LOC106582146 other upstream 978643 25822812 ~ 25825108 (-)
G240409 NA other upstream 1724388 26569101 ~ 26569522 (-)
G240464 NA other upstream 1829879 26674592 ~ 26675033 (-)

Expression


Co-expression Network