LOC110515183 (LOC106581871)


Basic Information

Item Value
gene id LOC110515183
gene name LOC106581871
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 24884628 ~ 24893913 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021594179.2
gggtggggtggacAACGGTGGTGGGGGCTGGGCCCAGGCCTGGGGCTGGGACCGCTGTATGCAATGGGAACCAGGGCCTGGAGAGGGGGCACAGGCCCCAGCATTTGACTGCCCAGTCTGGTGTGTCCTCTGCCAGGGATGTAGGGCTAGGCTCAGGGAGGCctgccagagagggaggggggccaTCAGACTGCCCACAGACATGCTTAGCATCAAACTCCCCCAGCTCTTTGACATCCACCAAGTCCCCAAGGTGTTCCGGGAGGATGGCATCATCTCGGGATACCGTCACCCCCAAAGCTCCGCCCTGGACTGCATCCTTAGCAGCTTCCAGATGACCAATGAGACCGTCAACATCTGGACCCACTTCCTGCCCACATGGTACTTCCTGTGGCGCTTCAGTGTCCTGTGCTCCACACTGAACTTCCTGTCGGAGAGCTACACCTGGCCGCTGCTGGTGTACATGCTGCTAATCTGCGTGTACCCCTTCACCTCCAGCTGTGCCCACACCTTCAGCACCATGTCCCCCGAGGCACGCCACATCTGCTACTTCTTCGACTACGGCGCCCTCAGCCTCTACAGCCTGGGTTGTGCCATAACTTATAGCTCCTATGTGATGCCTGACTGCTGGGTCAACAGCTGGCTGCACCAACACTTTGTGCCCATCGCCATCTGCAACACACTATTCTGCACCAGCCTGTCCTGCTATTCTAGATTTCTGGAGATGCAGTTTCCACACCGGAGTAAAATTCTCCGGACAGGGGCATTTGTCTTTCCATTCATCTTTGACAACATCCCTCTATTTTACAGActgctgCTGTGCTGCGGGGGCAGCTGCTGTCACAGTGAGGCCCTGCCCAGTCACTGTTACCACCTCCTCTTCGCCTTCCTCACCTGCTTCCTGTTTGCCTCACACCTCCCAGAGAGGCTGGCCCCGGGGCGCTTCGACTACTTTGgtcACAGTCACCAGCTTTTCCACATCTGTGCCGTGGTGGGTACCCACTTCCAGATGGAGGCGGTGCTAGCAGATATGACCTCACGCAGGGCGTGGCTCATCGCCCAGGCGGCCATACCCTCCTTCCTGAGTACCCTGGGGGCACTGGCCCTCGGCATCATCCTCAACCTAGGCATCATTGGCATCTTCAGTGCACCTCTGCTGTGGAACCCTCACCACAGTGCCAACCACCCACTGACGCCACCCACGAAACGCAAGGAACAGTGACACTCCCCACAACCAGTGACCACCCAGTATGTTCAAATGAAAAGGTTTGGCTAAATCATTCTACCAGTCGTGAACTTTGGAAATAATAACCATAAGAAGTTATATTATACCTTTTAAAACCAGGTAGTATTTGTATAAACCCATTGGATTATTATCACAGGATGGTTTTTCTACATGTTATTCTAACGTCATTATAAGGTTTGTTTAGGAGTTTATTCATGTGTTCACTGTTTGAAGCCGAATACCCAGCTATTTTTATGAAGCCTTTCAGTTATTCAGTATCATTGTATACCGTTAAAAGTTTTGGAGGTATTTTGAGTTAAAGTATCATATGCCAACTTCTTTTCACTTATACTTGAAAGGATCTGGGTTGTATGAAGCATATGTGATGTCTAACAACACATGAAAGTgccttttttatatatatatatatattgacccAAATGTTACCTAAGTACTCGTAAATATTATTTCTGGTTCGTGTAAATCTCAAACTGGAAAAATCTTTAACTGTAAATTTGCAGGGAATTTTCACATTAATATATAAGTATTTAGCTACTGTTTTTCAAATGTCCTATATATTTATTAGCCATTATTAGAACATCTCAAAACGCATATTTAATATAAATTATGACTATCCATTACATGATTCTCTAAAATAATCTGTACTCTCACTAACTGGACTACTTAGTATGATTCCACCATTTTGTTTTAATATTCAATACCATCTCATTTAAATCTCCACTATGACTTTAATAGATTTACAGACCAGTGTAGTGCTCATTCAGATTAACCTTCTCTAAAggacctaaaagggttcttcgactgcccccataggagaaccctttaaagaaccctttttggttccagctagaacccttttgagttccttgtagaaccctttccacagagggttctacatagaacccaaaaGAGTTATATCTGGagtcaaaaagggttctacctgaaaccaaaaaggtttCTCCTATGGGCACAGccggagaacccttttggaaccctttttttctaagtgtgtacCTGAAAGCTACAGCACTGTACCATGTCTATGATTAAAAAACAGGTGACATTTTGCAGAGGTACGTTTCCATGGAAACTTCATGGTTCTTCGCAGTTTGTGTTCCTGTGAATGCCCAGTCACTTGAATTGTTCTTTGGAGTACTCTTATTTTTTACTTCTACAACATACAGAAATGGTCATTGGATGCATTTTTTTGAAACATTACGTGCTGTTTAAACGTCAGAGAATTACTGAAATTCTACCTAACATACACATGCTTTAGGGAGATAGGACATTCCAAATGACCTTGTTTATAACAGCTATCTAATGGAAGAAATCTTAGATGATGGTGCACAACAGAACTGAATAAGTGATGTCATCTCACCTCCCAGGAATGGGGATGTGGTCAGTGGAGGTCAAAGGCTCTTGGCACTGTCGTATTCATGTGGTATCGTGGTGGTCATTGCAGGTTTATGGCAAACCAATACACCGCTCACCCCATGCTGGTATAACATTGTCAGTGGCTATTGTTTACATGTATCCTCGAAAAAGAGTGTGGTATCTCTTGAGTATTTATTCCTTGTAGTATATATAACAGCACCTACTGTTTCTGTTCAGTTGTAAAGTGTGAAGCATATGTACAGGTAATGTacagccaaaataaaggaaacaccaacgtaaagtgtcttaatagggtgttgggccaccacgagcttCCAGAACAGCTTCtatgccttggcatagattcta

Function

NR:

description
progestin and adipoQ receptor family member 6-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021594179.2 True 2989 mRNA 0.45 7 24884628 24893913

Neighbor

gene id symbol gene type direction distance location
LOC118944507 NA coding downstream 39915 24843450 ~ 24844713 (-)
LOC110515174 NA coding downstream 59492 24819843 ~ 24825136 (-)
LOC100305168 rbm8a coding downstream 69161 24808425 ~ 24815467 (-)
LOC110515154 LOC106605289 coding downstream 85117 24767049 ~ 24799511 (-)
LOC110515141 LOC106581821 coding downstream 119145 24727603 ~ 24765483 (-)
LOC110515194 LOC106581883 coding upstream 10351 24904264 ~ 24920014 (-)
LOC110515208 LOC106581894 coding upstream 43716 24936516 ~ 25052970 (-)
LOC110515238 LOC106581944 coding upstream 164681 25058594 ~ 25072664 (-)
LOC110515290 LOC106581956 coding upstream 207480 25101393 ~ 25106636 (-)
LOC110515302 LOC106581964 coding upstream 213909 25107822 ~ 25111116 (-)
G238316 NA non-coding downstream 164659 24719736 ~ 24719969 (-)
G238315 LOC106581815 non-coding downstream 166070 24717738 ~ 24718558 (-)
G237877 NA non-coding downstream 324052 24560332 ~ 24560576 (-)
G238414 NA non-coding upstream 34886 24928799 ~ 24931448 (-)
G238494 tap1 non-coding upstream 235189 25129102 ~ 25129653 (-)
G238509 NA non-coding upstream 255637 25149550 ~ 25149823 (-)
LOC110515384 LOC106582009 non-coding upstream 277413 25171287 ~ 25236536 (-)
G238588 NA non-coding upstream 284723 25178636 ~ 25178846 (-)
G237832 NA other downstream 363084 24521219 ~ 24521544 (-)
G237657 LOC106605316 other downstream 700664 24180556 ~ 24183964 (-)
LOC110514600 ensa other downstream 1104493 23771511 ~ 23780158 (-)
G237047 NA other downstream 1695597 23157109 ~ 23189031 (-)
LOC110515750 LOC106582146 other upstream 929443 25822812 ~ 25825108 (-)
G240409 NA other upstream 1675188 26569101 ~ 26569522 (-)
G240464 NA other upstream 1780679 26674592 ~ 26675033 (-)

Expression


Co-expression Network