Item | Value |
---|---|
gene id | LOC110515384 |
gene name | LOC106582009 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 25171287 ~ 25236536 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021594305.2 | False | 6074 | mRNA | 0.46 | 10 | 25171287 | 25236535 |
XM_021594312.2 | False | 6070 | mRNA | 0.46 | 10 | 25171287 | 25236535 |
XM_036973147.1 | False | 6032 | mRNA | 0.46 | 11 | 25171287 | 25236535 |
XM_021594320.2 | False | 6072 | mRNA | 0.46 | 10 | 25171287 | 25236536 |
TU272613 | False | 901 | lncRNA | 0.43 | 1 | 25171326 | 25172226 |
TU272614 | True | 674 | TUCP | 0.44 | 3 | 25199088 | 25236367 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
notchl | LOC106581966 | coding | downstream | 45845 | 25119183 ~ 25125442 (-) |
LOC110515302 | LOC106581964 | coding | downstream | 60171 | 25107822 ~ 25111116 (-) |
LOC110515290 | LOC106581956 | coding | downstream | 64651 | 25101393 ~ 25106636 (-) |
LOC110515238 | LOC106581944 | coding | downstream | 98623 | 25058594 ~ 25072664 (-) |
LOC110515208 | LOC106581894 | coding | downstream | 118317 | 24936516 ~ 25052970 (-) |
LOC110515443 | LOC106605270 | coding | upstream | 229315 | 25465851 ~ 25521829 (-) |
LOC110515528 | LOC106582056 | coding | upstream | 331503 | 25568039 ~ 25575807 (-) |
LOC110503974 | NA | coding | upstream | 347405 | 25583941 ~ 25589424 (-) |
LOC110515569 | LOC106605268 | coding | upstream | 360168 | 25596704 ~ 25643498 (-) |
LOC110515676 | LOC106582133 | coding | upstream | 563701 | 25800237 ~ 25810648 (-) |
G238509 | NA | non-coding | downstream | 21464 | 25149550 ~ 25149823 (-) |
G238494 | tap1 | non-coding | downstream | 41634 | 25129102 ~ 25129653 (-) |
G238414 | NA | non-coding | downstream | 239839 | 24928799 ~ 24931448 (-) |
LOC110515154 | LOC106605289 | non-coding | downstream | 401956 | 24767049 ~ 24799511 (-) |
LOC110515141 | LOC106581821 | non-coding | downstream | 405925 | 24727603 ~ 24765483 (-) |
G238623 | NA | non-coding | upstream | 1136 | 25237672 ~ 25237878 (-) |
G238624 | NA | non-coding | upstream | 1652 | 25238188 ~ 25238510 (-) |
G238713 | NA | non-coding | upstream | 31234 | 25267770 ~ 25268121 (-) |
G238712 | NA | non-coding | upstream | 97415 | 25333951 ~ 25335809 (-) |
G238791 | NA | non-coding | upstream | 134086 | 25370622 ~ 25370914 (-) |
G237832 | NA | other | downstream | 649743 | 24521219 ~ 24521544 (-) |
G237657 | LOC106605316 | other | downstream | 987323 | 24180556 ~ 24183964 (-) |
LOC110514600 | ensa | other | downstream | 1391152 | 23771511 ~ 23780158 (-) |
LOC110515750 | LOC106582146 | other | upstream | 586820 | 25822812 ~ 25825108 (-) |
G240409 | NA | other | upstream | 1332565 | 26569101 ~ 26569522 (-) |
G240464 | NA | other | upstream | 1438056 | 26674592 ~ 26675033 (-) |
LOC110516631 | LOC106582601 | other | upstream | 1834519 | 27070914 ~ 27097259 (-) |
LOC110516667 | LOC106582624 | other | upstream | 1875646 | 27111084 ~ 27127488 (-) |
G238588 | NA | non-coding | upstream | 6410 | 25178636 ~ 25178846 (-) |
G238593 | NA | non-coding | upstream | 16833 | 25189059 ~ 25189309 (-) |
LOC110515384 | LOC106582009 | other | upstream | 26862 | 25171287 ~ 25236536 (-) |