si:dkey-82o10.4 (LOC106582066)


Basic Information

Item Value
gene id si:dkey-82o10.4
gene name LOC106582066
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 25563330 ~ 25566407 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021594415.2
TCCATGGGGATTATGGGTACAGCATCGGACAGTTACATAAGTTTGCCGGAAGAACCACACAGGAGAATGCATATTGCTTTCTATCAAAATCCAGAATGAAAATTATACTATATCGTTTTGCTTTCGCAGGTGCGTTGGCATGATGCAGCGGTTTACATGTATCGCCACGTGCCGTGAGCTCCGCGGGTTAGTAAAGCGCTCATACGTGTCATCGCTGGCCTCCCCCTTGAATAGGACCTATTCCACGATGCCAAAACAGCCCCTATGCCGTTCATCGACGTCTATCTATACGTGCACCGCGGGTCCGCTTGGAGAACCGACCGCACGATGTAGCTTGCATAACTTGCGGCGACAAAGTGGGGTTTTCTCTCATGAGAAATACAGACACTACTGCACAGAGAGCGAGAATGAACGGAAGCGCACTGGCGGCCATGGTCATCATGGCATCACAGTTGTTGGCATCCCTGATCCACTCACGTGGATTCGGAATAAAGTCCACATCTACCTGATAGAACTCTATTTTCAATTGGGCATTAACAATGTGGAATTTGACAATGGAGTCAAGCAGGCACTGGTCCATGTCTCCACCATGATGTCCAATGGCAACTTTGAGGAGCTGAGAGGGTTGGTATCAACAGAGATGGTGGTCTATGCGCAACAGAGGTGTAGGGCTCTCTCAGAAACCCAAAGAAGACATCTAGCTATCTCATTGGACGATATTATATTTATTCTGCCAGAGGAAGTTTCCATAGTTTTTGATTCAAATgGTAGGAAGTTTTGCTTCATTGTGATGAGGTTCTGGCATATGTCCACTGCTGATGTTCCTGAGGACCCGGAGAGTACCAAGATATTCAAAATGGCCGCCACTGAAGAAGACGGCCCACAGAAGAAGATAGTGACAGCTGTCTATGAattCCACCGGGAGCTGACCAGGGGAGCTGAACCTGATTGGACAGTCACTAACATCTGGCACTGGCACTGGAAACAGATTGGGTGATTGGACAAGACCCATGAATACCTCTGTCACCAGGATACAGCATCAGACCAAGCATACACAGCACCGTTTACCTAATTCAGTTCCGACAACATTCAACTCAACAAAACATTATTAACCAACAGGACTTCAATCAGCAGGACCATTGTACTCAGCCAAGCGCACCCAAACTCAACTGAACCATTACAAGTCAACAGAAGAGTCACATTGAGTCCTAGCTGCTTTGTAGGGTGGACTGGATGGAACCAGagccatacacactgaaatacagATGTATTATTTCTCCCTAAGTTCTCCAATCTGAGGTTTGTTGGAAACAATAGACTTTATCTGAATCTCCTCAGCATGAACAATTAGTGCCTACAATATCCCTGCTGTTACAGTTTGTCCCAGAACCAAATAAACTGCTTCATGGTGATACTG

Function

NR:

description
m-AAA protease-interacting protein 1, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021594415.2 True 1417 mRNA 0.46 5 25563330 25566407

Neighbor

gene id symbol gene type direction distance location
LOC110515430 LOC106582018 coding upstream 227507 25275403 ~ 25335823 (+)
LOC110515419 LOC106582023 coding upstream 292902 25262873 ~ 25270428 (+)
vmo1b vmo1 coding upstream 397965 25162240 ~ 25165365 (+)
LOC110515374 NA coding upstream 402180 25156376 ~ 25161150 (+)
LOC100136302 LOC106581989 coding upstream 416024 25137756 ~ 25147306 (+)
LOC110515550 LOC106582071 coding downstream 10759 25577166 ~ 25584936 (+)
LOC110515597 LOC105021876 coding downstream 150880 25717287 ~ 25747404 (+)
LOC110515611 LOC106582094 coding downstream 181379 25747786 ~ 25757241 (+)
LOC110515629 LOC106582110 coding downstream 193807 25760214 ~ 25771793 (+)
LOC110515656 LOC106582123 coding downstream 215868 25782275 ~ 25800223 (+)
G239043 NA non-coding upstream 1525 25561588 ~ 25561805 (+)
G239040 NA non-coding upstream 5153 25557940 ~ 25558177 (+)
G239033 NA non-coding upstream 9634 25553449 ~ 25553696 (+)
G238937 NA non-coding upstream 68270 25494416 ~ 25495060 (+)
G238923 NA non-coding upstream 98524 25464602 ~ 25464806 (+)
G239073 NA non-coding downstream 25212 25591619 ~ 25591884 (+)
G239196 NA non-coding downstream 118004 25684411 ~ 25684627 (+)
G239217 NA non-coding downstream 143014 25709421 ~ 25709704 (+)
G239280 LOC106582155 non-coding downstream 273195 25839602 ~ 25840173 (+)
G239026 NA other upstream 21717 25540769 ~ 25541613 (+)
G238540 LOC106582009 other upstream 364096 25195287 ~ 25199234 (+)
G238050 NA other upstream 787385 24775279 ~ 24775945 (+)
G238047 NA other upstream 796967 24765666 ~ 24766363 (+)
G238034 NA other upstream 812947 24749405 ~ 24750383 (+)
G239697 LOC106582257 other downstream 647235 26213642 ~ 26220183 (+)
G239752 meox2 other downstream 761001 26327408 ~ 26328331 (+)
G240244 NA other downstream 1484779 27051186 ~ 27051954 (+)
LOC110516767 LOC106605158 other downstream 1690181 27240708 ~ 27264405 (+)
G241150 LOC106582751 other downstream 1989765 27556172 ~ 27558532 (+)

Expression


Co-expression Network